Description

Ensembl ID gene-CFP56_31097 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 3078 bases Strand Minus strand
Position PKMF03020873.1 : 101494 - 104571 RNA binding domain PPR_3 , PPR_long , PPR , MRP-S27
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
cds-POE50937 PPR_3 PF13812 2e-109 1
cds-POE50937 PPR_3 PF13812 2e-109 2
cds-POE50937 PPR_3 PF13812 2e-109 3
cds-POE50937 PPR_3 PF13812 2e-109 4
cds-POE50937 PPR_3 PF13812 2e-109 5
cds-POE50937 PPR_3 PF13812 2e-109 6
cds-POE50937 PPR_3 PF13812 2e-109 7
cds-POE50937 PPR_3 PF13812 2e-109 8
cds-POE50937 PPR_3 PF13812 2e-109 9
cds-POE50937 PPR_3 PF13812 2e-109 10
cds-POE50937 PPR_3 PF13812 2e-109 11
cds-POE50937 PPR_3 PF13812 2e-109 12
cds-POE50937 PPR_3 PF13812 2e-109 13
cds-POE50937 PPR_long PF17177 2.3e-63 14
cds-POE50937 PPR_long PF17177 2.3e-63 15
cds-POE50937 PPR_long PF17177 2.3e-63 16
cds-POE50937 PPR_long PF17177 2.3e-63 17
cds-POE50937 PPR PF01535 1.7e-159 18
cds-POE50937 PPR PF01535 1.7e-159 19
cds-POE50937 PPR PF01535 1.7e-159 20
cds-POE50937 PPR PF01535 1.7e-159 21
cds-POE50937 PPR PF01535 1.7e-159 22
cds-POE50937 PPR PF01535 1.7e-159 23
cds-POE50937 PPR PF01535 1.7e-159 24
cds-POE50937 PPR PF01535 1.7e-159 25
cds-POE50937 PPR PF01535 1.7e-159 26
cds-POE50937 PPR PF01535 1.7e-159 27
cds-POE50937 PPR PF01535 1.7e-159 28
cds-POE50937 PPR PF01535 1.7e-159 29
cds-POE50937 PPR PF01535 1.7e-159 30
cds-POE50937 PPR PF01535 1.7e-159 31
cds-POE50937 PPR PF01535 1.7e-159 32
cds-POE50937 PPR PF01535 1.7e-159 33
cds-POE50937 PPR PF01535 1.7e-159 34
cds-POE50937 PPR PF01535 1.7e-159 35
cds-POE50937 PPR PF01535 1.7e-159 36
cds-POE50937 PPR PF01535 1.7e-159 37
cds-POE50937 PPR PF01535 1.7e-159 38
cds-POE50937 MRP-S27 PF10037 4e-21 39
cds-POE50938 PPR_3 PF13812 1.2e-56 1
cds-POE50938 PPR_3 PF13812 1.2e-56 2
cds-POE50938 PPR_3 PF13812 1.2e-56 3
cds-POE50938 PPR_3 PF13812 1.2e-56 4
cds-POE50938 PPR_3 PF13812 1.2e-56 5
cds-POE50938 PPR_3 PF13812 1.2e-56 6
cds-POE50938 PPR_3 PF13812 1.2e-56 7
cds-POE50938 PPR_long PF17177 5.3e-32 8
cds-POE50938 PPR_long PF17177 5.3e-32 9
cds-POE50938 PPR_long PF17177 5.3e-32 10
cds-POE50938 PPR PF01535 3.4e-85 11
cds-POE50938 PPR PF01535 3.4e-85 12
cds-POE50938 PPR PF01535 3.4e-85 13
cds-POE50938 PPR PF01535 3.4e-85 14
cds-POE50938 PPR PF01535 3.4e-85 15
cds-POE50938 PPR PF01535 3.4e-85 16
cds-POE50938 PPR PF01535 3.4e-85 17
cds-POE50938 PPR PF01535 3.4e-85 18
cds-POE50938 PPR PF01535 3.4e-85 19
cds-POE50938 PPR PF01535 3.4e-85 20
cds-POE50938 PPR PF01535 3.4e-85 21
cds-POE50938 MRP-S27 PF10037 2.2e-14 22

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- rna-CFP56_31097 3078 1025aa cds-POE50937.1
- rna-CFP56_31097-2 1266 421aa cds-POE50938.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-CFP56_31097

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-CFP56_31097

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression