| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | gene-CFP56_24479 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
4972 bases |
Strand |
Minus strand |
| Position |
PKMF03018857.1 : 475150 - 480121 |
RNA binding domain |
RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| cds-POE59210 |
RNA_pol_Rpb1_4 |
PF05000 |
7.9e-33 |
1 |
| cds-POE59210 |
RNA_pol_Rpb1_1 |
PF04997 |
3.1e-57 |
2 |
| cds-POE59210 |
RNA_pol_Rpb1_5 |
PF04998 |
3.3e-99 |
3 |
| cds-POE59210 |
RNA_pol_Rpb1_2 |
PF00623 |
3.1e-74 |
4 |
| cds-POE59210 |
RNA_pol_Rpb1_3 |
PF04983 |
1e-44 |
5 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
6 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
7 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
8 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
9 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
10 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
11 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
12 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
13 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
14 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
15 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
16 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
17 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
18 |
| cds-POE59210 |
RNA_pol_Rpb1_R |
PF05001 |
6.8e-16 |
19 |
| cds-POE59210 |
RNA_pol_Rpb1_6 |
PF04992 |
2.3e-55 |
20 |
| cds-POE59210 |
RNA_pol_Rpb1_7 |
PF04990 |
2.8e-38 |
21 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
rna-CFP56_24479 |
4920 |
1639aa |
cds-POE59210.1 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| gene-CFP56_24479 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| gene-CFP56_24479 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
