| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | gene-CFP56_12615 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
3363 bases |
Strand |
Plus strand |
| Position |
PKMF03000134.1 : 956266 - 959628 |
RNA binding domain |
PPR_3 , Methyltransf_31 , Met_10 , PPR , Methyltransf_15 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| cds-POF27275 |
PPR_3 |
PF13812 |
2.4e-09 |
1 |
| cds-POF27275 |
Methyltransf_31 |
PF13847 |
3.4e-06 |
2 |
| cds-POF27275 |
Met_10 |
PF02475 |
1.6e-09 |
3 |
| cds-POF27275 |
PPR |
PF01535 |
6.6e-24 |
4 |
| cds-POF27275 |
PPR |
PF01535 |
6.6e-24 |
5 |
| cds-POF27275 |
PPR |
PF01535 |
6.6e-24 |
6 |
| cds-POF27275 |
PPR |
PF01535 |
6.6e-24 |
7 |
| cds-POF27275 |
PPR |
PF01535 |
6.6e-24 |
8 |
| cds-POF27275 |
Methyltransf_15 |
PF09445 |
4.3e-19 |
9 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
rna-CFP56_12615 |
1170 |
389aa |
cds-POF27275.1 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| gene-CFP56_12615 | | | | | | | | |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| gene-CFP56_12615 | | | | | | | | |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |