Description

Ensembl ID gene-BT93_I0767 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 9511 bases Strand Plus strand
Position 9 : 14312700 - 14322210 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_R , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
cds-KAF8012707 RNA_pol_Rpb1_4 PF05000 3.7e-40 1
cds-KAF8012707 RNA_pol_Rpb1_1 PF04997 2.8e-66 2
cds-KAF8012707 RNA_pol_Rpb1_5 PF04998 8.1e-106 3
cds-KAF8012707 RNA_pol_Rpb1_2 PF00623 2.4e-71 4
cds-KAF8012707 RNA_pol_Rpb1_3 PF04983 4.4e-50 5
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 6
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 7
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 8
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 9
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 10
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 11
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 12
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 13
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 14
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 15
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 16
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 17
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 18
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 19
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 20
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 21
cds-KAF8012707 RNA_pol_Rpb1_R PF05001 2.4e-17 22
cds-KAF8012707 RNA_pol_Rpb1_6 PF04992 5.4e-65 23
cds-KAF8012707 RNA_pol_Rpb1_7 PF04990 9.4e-53 24
cds-KAF8012706 RNA_pol_Rpb1_4 PF05000 3.7e-40 1
cds-KAF8012706 RNA_pol_Rpb1_1 PF04997 9.7e-67 2
cds-KAF8012706 RNA_pol_Rpb1_5 PF04998 8.3e-106 3
cds-KAF8012706 RNA_pol_Rpb1_2 PF00623 2.4e-71 4
cds-KAF8012706 RNA_pol_Rpb1_3 PF04983 4.5e-50 5
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 6
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 7
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 8
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 9
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 10
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 11
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 12
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 13
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 14
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 15
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 16
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 17
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 18
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 19
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 20
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 21
cds-KAF8012706 RNA_pol_Rpb1_R PF05001 3.1e-17 22
cds-KAF8012706 RNA_pol_Rpb1_6 PF04992 5.5e-65 23
cds-KAF8012706 RNA_pol_Rpb1_7 PF04990 9.6e-53 24

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- rna-gnl
WGS:JABURB
Cocit.I0767.2 6317 1748aa cds-KAF8012707.1
- rna-gnl
WGS:JABURB
Cocit.I0767.1 6177 1766aa cds-KAF8012706.1

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-BT93_I0767

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-BT93_I0767

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression