Description

Ensembl ID gene-BT93_C0447 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 7659 bases Strand Plus strand
Position 3 : 5212659 - 5220317 RNA binding domain RRM_5 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
cds-KAF8034171 RRM_5 PF13893 3.3e-08 1
cds-KAF8034171 RRM_1 PF00076 2.9e-54 2
cds-KAF8034171 RRM_1 PF00076 2.9e-54 3
cds-KAF8034171 RRM_1 PF00076 2.9e-54 4
cds-KAF8034170 RRM_5 PF13893 3.4e-08 1
cds-KAF8034170 RRM_1 PF00076 3e-54 2
cds-KAF8034170 RRM_1 PF00076 3e-54 3
cds-KAF8034170 RRM_1 PF00076 3e-54 4
cds-KAF8034173 RRM_1 PF00076 3.8e-54 1
cds-KAF8034173 RRM_1 PF00076 3.8e-54 2
cds-KAF8034173 RRM_1 PF00076 3.8e-54 3
cds-KAF8034172 RRM_1 PF00076 3.9e-54 1
cds-KAF8034172 RRM_1 PF00076 3.9e-54 2
cds-KAF8034172 RRM_1 PF00076 3.9e-54 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- rna-gnl
WGS:JABURB
Cocit.C0447.2 2546 458aa cds-KAF8034170.1
- rna-gnl
WGS:JABURB
Cocit.C0447.3 2540 456aa cds-KAF8034171.1
- rna-gnl
WGS:JABURB
Cocit.C0447.4 2390 486aa cds-KAF8034173.1
- rna-gnl
WGS:JABURB
Cocit.C0447.1 2396 488aa cds-KAF8034172.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-BT93_C0447

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-BT93_C0447

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression