Description

Ensembl ID gene-BT93_B3017 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 10474 bases Strand Plus strand
Position 2 : 40581665 - 40592138 RNA binding domain RRM_5 , RRM_1 , RRM_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
cds-KAF8040969 RRM_5 PF13893 9.3e-09 1
cds-KAF8040969 RRM_5 PF13893 9.3e-09 2
cds-KAF8040969 RRM_1 PF00076 1.2e-24 3
cds-KAF8040969 RRM_1 PF00076 1.2e-24 4
cds-KAF8040969 RRM_2 PF04059 6.4e-54 5
cds-KAF8040970 RRM_5 PF13893 9.3e-09 1
cds-KAF8040970 RRM_5 PF13893 9.3e-09 2
cds-KAF8040970 RRM_1 PF00076 1.2e-24 3
cds-KAF8040970 RRM_1 PF00076 1.2e-24 4
cds-KAF8040970 RRM_2 PF04059 6.4e-54 5
cds-KAF8040972 RRM_5 PF13893 9.3e-09 1
cds-KAF8040972 RRM_5 PF13893 9.3e-09 2
cds-KAF8040972 RRM_1 PF00076 1.2e-24 3
cds-KAF8040972 RRM_1 PF00076 1.2e-24 4
cds-KAF8040972 RRM_2 PF04059 6.4e-54 5
cds-KAF8040971 RRM_5 PF13893 1.1e-08 1
cds-KAF8040971 RRM_5 PF13893 1.1e-08 2
cds-KAF8040971 RRM_1 PF00076 1.3e-24 3
cds-KAF8040971 RRM_1 PF00076 1.3e-24 4
cds-KAF8040971 RRM_2 PF04059 6.8e-54 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- rna-gnl
WGS:JABURB
Cocit.B3017.1 3881 972aa cds-KAF8040971.1
- rna-gnl
WGS:JABURB
Cocit.B3017.4 3938 936aa cds-KAF8040972.1
- rna-gnl
WGS:JABURB
Cocit.B3017.3 4344 936aa cds-KAF8040969.1
- rna-gnl
WGS:JABURB
Cocit.B3017.2 4508 936aa cds-KAF8040970.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-BT93_B3017

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
gene-BT93_B3017

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression