Description

Ensembl ID g32218 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 2252 bases Strand Minus strand
Position FJVB01001312.1 : 480 - 2731 RNA binding domain Methyltrans_RNA , PUA_4
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g32218 Methyltrans_RNA PF04452 2.4e-40 1
g32218 PUA_4 PF20260 1.6e-12 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g32218.t1 1127 295aa g32218.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g32218arabidopsis_hallerig32293.t186.03680.1802arabidopsis_hallerig32218.t164.745860.339

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g32218arabidopsis_hallerig32218.t14023.7288chondrus_crispusCDF3844638.311722.7273
g32218arabidopsis_hallerig32218.t150.847536.6102chlamydomonas_reinhardtiiPNW8519828.62620.6107
g32218arabidopsis_hallerig32218.t175.593261.3559papaver_somniferumRZC5472678.245663.5088
g32218arabidopsis_hallerig32218.t170.508557.6271papaver_somniferumRZC6280179.693565.1341
g32218arabidopsis_hallerig32218.t176.949264.7458cannabis_sativa_femalecds.evm.model.01.53078.006965.6357
g32218arabidopsis_hallerig32218.t161.694943.0508physcomitrium_patensPp3c3_17050V3.151.558135.9773
g32218arabidopsis_hallerig32218.t178.305167.4576ficus_caricaFCD_00013816-RA:cds79.109668.1507
g32218arabidopsis_hallerig32218.t174.237360.678beta_vulgarisKMT010207561.3014
g32218arabidopsis_hallerig32218.t170.508558.9831citrullus_lanatusCla97C02G033960.164.596354.0373
g32218arabidopsis_hallerig32218.t149.152542.7119cucumis_sativusKGN4383966.820358.0645
g32218arabidopsis_hallerig32218.t179.32264.7458theobroma_cacaoEOX9851280.968966.09
g32218arabidopsis_hallerig32218.t196.271293.2203arabidopsis_thalianaAT1G50000.195.945992.9054
g32218arabidopsis_hallerig32218.t172.542459.661cucumis_meloMELO3C018530.2.172.297359.4595
g32218arabidopsis_hallerig32218.t175.593262.3729populus_trichocarpaPotri.001G290100.9.v4.165.395953.9589
g32218arabidopsis_hallerig32218.t194.237388.4746brassica_junceacds.BjuA06g38900S94.237388.4746
g32218arabidopsis_hallerig32218.t194.237388.1356brassica_napusCDY5097391.447485.5263
g32218arabidopsis_hallerig32218.t194.915389.1525brassica_napusCDY2812291.803386.2295
g32218arabidopsis_hallerig32218.t173.559358.6441malus_domestica_goldenmRNA:MD10G009080075.086559.8616
g32218arabidopsis_hallerig32218.t161.694944.4068marchantia_polymorphaPTQ3432755.319139.8176
g32218arabidopsis_hallerig32218.t177.627161.6949prunus_dulcisVVA1551764.689351.4124
g32218arabidopsis_hallerig32218.t178.98363.3898prunus_persicaONH9200779.251763.6054
g32218arabidopsis_hallerig32218.t172.881461.0169cajanus_cajanC.cajan_07751.t73.129261.2245
g32218arabidopsis_hallerig32218.t173.559362.7119glycine_maxKRG9113465.957456.231
g32218arabidopsis_hallerig32218.t165.762754.5763lupinus_angustifoliusOIW1284883.620769.3966
g32218arabidopsis_hallerig32218.t175.932262.3729medicago_truncatulaKEH4400678.321764.3357
g32218arabidopsis_hallerig32218.t173.898362.3729phaseolus_vulgarisESW1512975.958264.1115
g32218arabidopsis_hallerig32218.t175.932262.3729pisum_sativumPsat6g214440.1.cds78.596564.5614
g32218arabidopsis_hallerig32218.t165.084752.2034vigna_radiataVradi08g19870.170.329756.4103
g32218arabidopsis_hallerig32218.t173.559361.6949vigna_unguiculataVigun07g250300.1.v1.275.609863.4146
g32218arabidopsis_hallerig32218.t170.847559.322vigna_angularisKOM3619877.985165.2985
g32218arabidopsis_hallerig32218.t166.101754.5763manihot_esculentaOAY4540073.308360.5263
g32218arabidopsis_hallerig32218.t174.576360.678capsicum_annuumPHT6395470.739557.5563
g32218arabidopsis_hallerig32218.t175.254260.339solanum_lycopersicumSolyc01g106880.3.165.294152.3529
g32218arabidopsis_hallerig32218.t173.220361.6949helianthus_annuusmRNA:HanXRQr2_Chr03g010788173.720162.116
g32218arabidopsis_hallerig32218.t170.169559.661lactuca_sativacds-PLY65435.176.951765.4275
g32218arabidopsis_hallerig32218.t167.796655.2542avena_sativa_sangAVESA.00010b.r2.7CG0700710.2.CDS60.42349.2447
g32218arabidopsis_hallerig32218.t168.135654.9153avena_sativa_sangAVESA.00010b.r2.4AG0604790.1.CDS68.600755.2901
g32218arabidopsis_hallerig32218.t168.135655.9322avena_sativa_sangAVESA.00010b.r2.4DG0748640.1.CDS68.600756.314
g32218arabidopsis_hallerig32218.t166.440753.2203oryza_longistaminataKN539008.1_FGP01455.681844.6023
g32218arabidopsis_hallerig32218.t164.067852.2034oryza_glaberrimaORGLA03G0298300.157.272746.6667
g32218arabidopsis_hallerig32218.t168.813655.5932secale_cerealeSECCE4Rv1G0221270.168.581155.4054
g32218arabidopsis_hallerig32218.t168.135654.9153setaria_viridisTKV9156868.367355.102
g32218arabidopsis_hallerig32218.t168.813655.9322sorghum_bicolorOQU9105770.731757.4913
g32218arabidopsis_hallerig32218.t168.135655.2542setaria_italicaKQK8729768.367355.4422
g32218arabidopsis_hallerig32218.t168.813655.5932triticum_aestivumTraesCS4A02G255300.168.350255.2189
g32218arabidopsis_hallerig32218.t16048.8136triticum_aestivumTraesCS4B02G059600.15948
g32218arabidopsis_hallerig32218.t168.813655.5932triticum_aestivumTraesCS4D02G059400.168.581155.4054
g32218arabidopsis_hallerig32218.t165.084753.8983ananas_comosusAco015864.1.mrna172.180559.7744
g32218arabidopsis_hallerig32218.t168.813655.5932triticum_turgidumTRITD4Av1G187300.168.350255.2189
g32218arabidopsis_hallerig32218.t169.152555.9322triticum_turgidumTRITD4Bv1G019440.269.152555.9322
g32218arabidopsis_hallerig32218.t169.830556.2712amborella_trichopodaERN1856569.830556.2712
g32218arabidopsis_hallerig32218.t178.98364.4068gossypium_raimondiiKJB4729180.344865.5172
g32218arabidopsis_hallerig32218.t166.440754.2373brachypodium_distachyonKQK1339566.666754.4218
g32218arabidopsis_hallerig32218.t175.593262.0339fraxinus_excelsiorFRAEX38873_v2_000381030.1.cds76.896663.1034
g32218arabidopsis_hallerig32218.t165.084751.1864oryza_glumipatulaOGLUM03G32530.164.864951.0135
g32218arabidopsis_hallerig32218.t176.271264.7458vitis_viniferaVitvi03g00710_P00178.397266.5505
g32218arabidopsis_hallerig32218.t174.237360.339coffea_canephoraCDP2039674.74460.7509
g32218arabidopsis_hallerig32218.t175.932260.678ipomoea_trilobaitb10g23790.t270.886156.6456
g32218arabidopsis_hallerig32218.t168.813655.5932triticum_urartuTuG1812G0400000548.01.T0168.350255.2189
g32218arabidopsis_hallerig32218.t168.135655.2542oryza_meridionalisOMERI03G29570.164.838752.5806
g32218arabidopsis_hallerig32218.t165.762751.8644prunus_aviumPav_sc0000490.1_g020.1.mk:mrna73.207657.7358
g32218arabidopsis_hallerig32218.t168.135655.2542oryza_sativaOs03t0729700-0160.909149.3939
g32218arabidopsis_hallerig32218.t175.593266.1017pistacia_veracds-EVM0028043.178.521168.662
g32218arabidopsis_hallerig32218.t177.288163.0508quercus_subercds-POF20831.173.311959.8071
g32218arabidopsis_hallerig32218.t141.355925.0847galdieria_sulphurariaEME3216741.355925.0847
g32218arabidopsis_hallerig32218.t162.711951.5254chenopodium_quinoaAUR62027019-RA:cds85.253570.0461
g32218arabidopsis_hallerig32218.t148.813642.0339dioscorea_rotundataDRNTG_08319.17262
g32218arabidopsis_hallerig32218.t172.203461.6949juglans_regiacds.Jr13_02420_p166.149156.5217
g32218arabidopsis_hallerig32218.t175.254263.7288juglans_regiacds.Jr13_02410_p167.477257.1429
g32218arabidopsis_hallerig32218.t146.440734.2373ostreococcus_lucimarinusABP0092355.691141.0569
g32218arabidopsis_hallerig32218.t175.254265.4237actinidia_chinensisPSS1926375.767965.8703
g32218arabidopsis_hallerig32218.t161.694949.1525aegilops_tauschiiAET4Gv20123700.573.092458.2329
g32218arabidopsis_hallerig32218.t172.203460.339musa_acuminataMa04_p03210.173.958361.8056
g32218arabidopsis_hallerig32218.t154.237341.6949selaginella_moellendorffiiEFJ3525962.015547.6744
g32218arabidopsis_hallerig32218.t153.220341.0169selaginella_moellendorffiiEFJ2419261.568647.451
g32218arabidopsis_hallerig32218.t168.474654.5763panicum_halliiPUZ3720368.94254.9488
g32218arabidopsis_hallerig32218.t193.898390.5085arabis_alpinaKFK3595594.539291.1263
g32218arabidopsis_hallerig32218.t176.949263.0508quercus_lobataQL11p029473:mrna62.021950.8197
g32218arabidopsis_hallerig32218.t180.67877.2881eutrema_salsugineumESQ3047596.74892.6829
g32218arabidopsis_hallerig32218.t169.491556.9492kalanchoe_fedtschenkoiKaladp0040s0275.1.v1.163.862952.3364
g32218arabidopsis_hallerig32218.t168.474655.2542hordeum_vulgareHORVU.MOREX.r3.4HG0339390.168.243255.0676
g32218arabidopsis_hallerig32218.t179.66165.7627rosa_chinensisPRQ2228378.073164.4518
g32218arabidopsis_hallerig32218.t156.949246.1017oryza_barthiiOBART03G32890.175.336360.9865
g32218arabidopsis_hallerig32218.t158.305141.6949chara_brauniiGBG6494735.030525.0509
g32218arabidopsis_hallerig32218.t175.932264.7458corymbia_citriodoracds-KAF8034912.176.975965.6357
g32218arabidopsis_hallerig32218.t194.237388.4746brassica_rapa_ro18A06p004050.1_BraROA.191.147585.5738
g32218arabidopsis_hallerig32218.t175.254264.0678eucalyptus_grandisKCW5682560.821951.7808
g32218arabidopsis_hallerig32218.t195.593292.5424camelina_sativaCsa03g055960.195.918492.8571
g32218arabidopsis_hallerig32218.t196.610294.2373camelina_sativaCsa17g085880.196.938894.5578
g32218arabidopsis_hallerig32218.t194.576392.2034camelina_sativaCsa14g057350.196.206993.7931
g32218arabidopsis_hallerig32218.t172.542455.9322daucus_carotaKZN0908271.333355
g32218arabidopsis_hallerig32218.t157.627146.4407digitaria_exilisDexi9B01G0009800.1:cds65.891553.1008
g32218arabidopsis_hallerig32218.t157.966147.4576digitaria_exilisDexi9A01G0010210.1:cds67.857155.5556
g32218arabidopsis_hallerig32218.t165.084752.5424eragrostis_tefEt_4B_037848.CDS46.601937.6214
g32218arabidopsis_hallerig32218.t168.813656.6102eragrostis_tefEt_4A_033692.CDS61.515250.6061
g32218arabidopsis_hallerig32218.t168.813655.5932triticum_dicoccoidesTRIDC4AG039980.168.813655.5932
g32218arabidopsis_hallerig32218.t168.813655.5932triticum_dicoccoidesTRIDC4BG009180.169.283355.9727
g32218arabidopsis_hallerig32218.t198.98398.3051arabidopsis_lyrataAl_scaffold_0001_436398.98398.3051
g32218arabidopsis_hallerig32218.t168.813656.2712saccharum_spontaneumSspon.01G0026200-3C-mRNA-170.731757.8397
g32218arabidopsis_hallerig32218.t168.813655.9322saccharum_spontaneumSspon.01G0026200-1A-mRNA-1:cds70.731757.4913
g32218arabidopsis_hallerig32218.t169.152555.5932nymphaea_colorataNC3G0225380.1:cds71.578957.5439
g32218arabidopsis_hallerig32218.t168.813655.2542echinochloa_crusgalliscaffold35.291.cds68.581155.0676
g32218arabidopsis_hallerig32218.t169.152555.9322echinochloa_crusgalliscaffold3.1256.cds68.918955.7432
g32218arabidopsis_hallerig32218.t168.135654.9153echinochloa_crusgalliscaffold20.858.cds68.367355.102
g32218arabidopsis_hallerig32218.t195.593290.1695brassica_oleraceaBo6g019800.195.270389.8649
g32218arabidopsis_hallerig32218.t178.305163.7288corchorus_capsularisOMO7385679.655264.8276
g32218arabidopsis_hallerig32218.t175.593262.7119trifolium_pratenseTp57577_TGAC_v2_mRNA2186377.162664.0138
g32218arabidopsis_hallerig32218.t164.067853.2203cynara_cardunculusKVI0193372.413860.1533

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression