RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | g32218 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
2252 bases |
Strand |
Minus strand |
Position |
FJVB01001312.1 : 480 - 2731 |
RNA binding domain |
Methyltrans_RNA , PUA_4 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
g32218 |
Methyltrans_RNA |
PF04452 |
2.4e-40 |
1 |
g32218 |
PUA_4 |
PF20260 |
1.6e-12 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
g32218.t1 |
1127 |
295aa |
g32218.t1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g32218 | arabidopsis_halleri | g32293.t1 | 86.036 | 80.1802 | arabidopsis_halleri | g32218.t1 | 64.7458 | 60.339 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g32218 | arabidopsis_halleri | g32218.t1 | 40 | 23.7288 | chondrus_crispus | CDF38446 | 38.3117 | 22.7273 |
g32218 | arabidopsis_halleri | g32218.t1 | 50.8475 | 36.6102 | chlamydomonas_reinhardtii | PNW85198 | 28.626 | 20.6107 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.5932 | 61.3559 | papaver_somniferum | RZC54726 | 78.2456 | 63.5088 |
g32218 | arabidopsis_halleri | g32218.t1 | 70.5085 | 57.6271 | papaver_somniferum | RZC62801 | 79.6935 | 65.1341 |
g32218 | arabidopsis_halleri | g32218.t1 | 76.9492 | 64.7458 | cannabis_sativa_female | cds.evm.model.01.530 | 78.0069 | 65.6357 |
g32218 | arabidopsis_halleri | g32218.t1 | 61.6949 | 43.0508 | physcomitrium_patens | Pp3c3_17050V3.1 | 51.5581 | 35.9773 |
g32218 | arabidopsis_halleri | g32218.t1 | 78.3051 | 67.4576 | ficus_carica | FCD_00013816-RA:cds | 79.1096 | 68.1507 |
g32218 | arabidopsis_halleri | g32218.t1 | 74.2373 | 60.678 | beta_vulgaris | KMT01020 | 75 | 61.3014 |
g32218 | arabidopsis_halleri | g32218.t1 | 70.5085 | 58.9831 | citrullus_lanatus | Cla97C02G033960.1 | 64.5963 | 54.0373 |
g32218 | arabidopsis_halleri | g32218.t1 | 49.1525 | 42.7119 | cucumis_sativus | KGN43839 | 66.8203 | 58.0645 |
g32218 | arabidopsis_halleri | g32218.t1 | 79.322 | 64.7458 | theobroma_cacao | EOX98512 | 80.9689 | 66.09 |
g32218 | arabidopsis_halleri | g32218.t1 | 96.2712 | 93.2203 | arabidopsis_thaliana | AT1G50000.1 | 95.9459 | 92.9054 |
g32218 | arabidopsis_halleri | g32218.t1 | 72.5424 | 59.661 | cucumis_melo | MELO3C018530.2.1 | 72.2973 | 59.4595 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.5932 | 62.3729 | populus_trichocarpa | Potri.001G290100.9.v4.1 | 65.3959 | 53.9589 |
g32218 | arabidopsis_halleri | g32218.t1 | 94.2373 | 88.4746 | brassica_juncea | cds.BjuA06g38900S | 94.2373 | 88.4746 |
g32218 | arabidopsis_halleri | g32218.t1 | 94.2373 | 88.1356 | brassica_napus | CDY50973 | 91.4474 | 85.5263 |
g32218 | arabidopsis_halleri | g32218.t1 | 94.9153 | 89.1525 | brassica_napus | CDY28122 | 91.8033 | 86.2295 |
g32218 | arabidopsis_halleri | g32218.t1 | 73.5593 | 58.6441 | malus_domestica_golden | mRNA:MD10G0090800 | 75.0865 | 59.8616 |
g32218 | arabidopsis_halleri | g32218.t1 | 61.6949 | 44.4068 | marchantia_polymorpha | PTQ34327 | 55.3191 | 39.8176 |
g32218 | arabidopsis_halleri | g32218.t1 | 77.6271 | 61.6949 | prunus_dulcis | VVA15517 | 64.6893 | 51.4124 |
g32218 | arabidopsis_halleri | g32218.t1 | 78.983 | 63.3898 | prunus_persica | ONH92007 | 79.2517 | 63.6054 |
g32218 | arabidopsis_halleri | g32218.t1 | 72.8814 | 61.0169 | cajanus_cajan | C.cajan_07751.t | 73.1292 | 61.2245 |
g32218 | arabidopsis_halleri | g32218.t1 | 73.5593 | 62.7119 | glycine_max | KRG91134 | 65.9574 | 56.231 |
g32218 | arabidopsis_halleri | g32218.t1 | 65.7627 | 54.5763 | lupinus_angustifolius | OIW12848 | 83.6207 | 69.3966 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.9322 | 62.3729 | medicago_truncatula | KEH44006 | 78.3217 | 64.3357 |
g32218 | arabidopsis_halleri | g32218.t1 | 73.8983 | 62.3729 | phaseolus_vulgaris | ESW15129 | 75.9582 | 64.1115 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.9322 | 62.3729 | pisum_sativum | Psat6g214440.1.cds | 78.5965 | 64.5614 |
g32218 | arabidopsis_halleri | g32218.t1 | 65.0847 | 52.2034 | vigna_radiata | Vradi08g19870.1 | 70.3297 | 56.4103 |
g32218 | arabidopsis_halleri | g32218.t1 | 73.5593 | 61.6949 | vigna_unguiculata | Vigun07g250300.1.v1.2 | 75.6098 | 63.4146 |
g32218 | arabidopsis_halleri | g32218.t1 | 70.8475 | 59.322 | vigna_angularis | KOM36198 | 77.9851 | 65.2985 |
g32218 | arabidopsis_halleri | g32218.t1 | 66.1017 | 54.5763 | manihot_esculenta | OAY45400 | 73.3083 | 60.5263 |
g32218 | arabidopsis_halleri | g32218.t1 | 74.5763 | 60.678 | capsicum_annuum | PHT63954 | 70.7395 | 57.5563 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.2542 | 60.339 | solanum_lycopersicum | Solyc01g106880.3.1 | 65.2941 | 52.3529 |
g32218 | arabidopsis_halleri | g32218.t1 | 73.2203 | 61.6949 | helianthus_annuus | mRNA:HanXRQr2_Chr03g0107881 | 73.7201 | 62.116 |
g32218 | arabidopsis_halleri | g32218.t1 | 70.1695 | 59.661 | lactuca_sativa | cds-PLY65435.1 | 76.9517 | 65.4275 |
g32218 | arabidopsis_halleri | g32218.t1 | 67.7966 | 55.2542 | avena_sativa_sang | AVESA.00010b.r2.7CG0700710.2.CDS | 60.423 | 49.2447 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.1356 | 54.9153 | avena_sativa_sang | AVESA.00010b.r2.4AG0604790.1.CDS | 68.6007 | 55.2901 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.1356 | 55.9322 | avena_sativa_sang | AVESA.00010b.r2.4DG0748640.1.CDS | 68.6007 | 56.314 |
g32218 | arabidopsis_halleri | g32218.t1 | 66.4407 | 53.2203 | oryza_longistaminata | KN539008.1_FGP014 | 55.6818 | 44.6023 |
g32218 | arabidopsis_halleri | g32218.t1 | 64.0678 | 52.2034 | oryza_glaberrima | ORGLA03G0298300.1 | 57.2727 | 46.6667 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.5932 | secale_cereale | SECCE4Rv1G0221270.1 | 68.5811 | 55.4054 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.1356 | 54.9153 | setaria_viridis | TKV91568 | 68.3673 | 55.102 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.9322 | sorghum_bicolor | OQU91057 | 70.7317 | 57.4913 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.1356 | 55.2542 | setaria_italica | KQK87297 | 68.3673 | 55.4422 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.5932 | triticum_aestivum | TraesCS4A02G255300.1 | 68.3502 | 55.2189 |
g32218 | arabidopsis_halleri | g32218.t1 | 60 | 48.8136 | triticum_aestivum | TraesCS4B02G059600.1 | 59 | 48 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.5932 | triticum_aestivum | TraesCS4D02G059400.1 | 68.5811 | 55.4054 |
g32218 | arabidopsis_halleri | g32218.t1 | 65.0847 | 53.8983 | ananas_comosus | Aco015864.1.mrna1 | 72.1805 | 59.7744 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.5932 | triticum_turgidum | TRITD4Av1G187300.1 | 68.3502 | 55.2189 |
g32218 | arabidopsis_halleri | g32218.t1 | 69.1525 | 55.9322 | triticum_turgidum | TRITD4Bv1G019440.2 | 69.1525 | 55.9322 |
g32218 | arabidopsis_halleri | g32218.t1 | 69.8305 | 56.2712 | amborella_trichopoda | ERN18565 | 69.8305 | 56.2712 |
g32218 | arabidopsis_halleri | g32218.t1 | 78.983 | 64.4068 | gossypium_raimondii | KJB47291 | 80.3448 | 65.5172 |
g32218 | arabidopsis_halleri | g32218.t1 | 66.4407 | 54.2373 | brachypodium_distachyon | KQK13395 | 66.6667 | 54.4218 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.5932 | 62.0339 | fraxinus_excelsior | FRAEX38873_v2_000381030.1.cds | 76.8966 | 63.1034 |
g32218 | arabidopsis_halleri | g32218.t1 | 65.0847 | 51.1864 | oryza_glumipatula | OGLUM03G32530.1 | 64.8649 | 51.0135 |
g32218 | arabidopsis_halleri | g32218.t1 | 76.2712 | 64.7458 | vitis_vinifera | Vitvi03g00710_P001 | 78.3972 | 66.5505 |
g32218 | arabidopsis_halleri | g32218.t1 | 74.2373 | 60.339 | coffea_canephora | CDP20396 | 74.744 | 60.7509 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.9322 | 60.678 | ipomoea_triloba | itb10g23790.t2 | 70.8861 | 56.6456 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.5932 | triticum_urartu | TuG1812G0400000548.01.T01 | 68.3502 | 55.2189 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.1356 | 55.2542 | oryza_meridionalis | OMERI03G29570.1 | 64.8387 | 52.5806 |
g32218 | arabidopsis_halleri | g32218.t1 | 65.7627 | 51.8644 | prunus_avium | Pav_sc0000490.1_g020.1.mk:mrna | 73.2076 | 57.7358 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.1356 | 55.2542 | oryza_sativa | Os03t0729700-01 | 60.9091 | 49.3939 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.5932 | 66.1017 | pistacia_vera | cds-EVM0028043.1 | 78.5211 | 68.662 |
g32218 | arabidopsis_halleri | g32218.t1 | 77.2881 | 63.0508 | quercus_suber | cds-POF20831.1 | 73.3119 | 59.8071 |
g32218 | arabidopsis_halleri | g32218.t1 | 41.3559 | 25.0847 | galdieria_sulphuraria | EME32167 | 41.3559 | 25.0847 |
g32218 | arabidopsis_halleri | g32218.t1 | 62.7119 | 51.5254 | chenopodium_quinoa | AUR62027019-RA:cds | 85.2535 | 70.0461 |
g32218 | arabidopsis_halleri | g32218.t1 | 48.8136 | 42.0339 | dioscorea_rotundata | DRNTG_08319.1 | 72 | 62 |
g32218 | arabidopsis_halleri | g32218.t1 | 72.2034 | 61.6949 | juglans_regia | cds.Jr13_02420_p1 | 66.1491 | 56.5217 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.2542 | 63.7288 | juglans_regia | cds.Jr13_02410_p1 | 67.4772 | 57.1429 |
g32218 | arabidopsis_halleri | g32218.t1 | 46.4407 | 34.2373 | ostreococcus_lucimarinus | ABP00923 | 55.6911 | 41.0569 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.2542 | 65.4237 | actinidia_chinensis | PSS19263 | 75.7679 | 65.8703 |
g32218 | arabidopsis_halleri | g32218.t1 | 61.6949 | 49.1525 | aegilops_tauschii | AET4Gv20123700.5 | 73.0924 | 58.2329 |
g32218 | arabidopsis_halleri | g32218.t1 | 72.2034 | 60.339 | musa_acuminata | Ma04_p03210.1 | 73.9583 | 61.8056 |
g32218 | arabidopsis_halleri | g32218.t1 | 54.2373 | 41.6949 | selaginella_moellendorffii | EFJ35259 | 62.0155 | 47.6744 |
g32218 | arabidopsis_halleri | g32218.t1 | 53.2203 | 41.0169 | selaginella_moellendorffii | EFJ24192 | 61.5686 | 47.451 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.4746 | 54.5763 | panicum_hallii | PUZ37203 | 68.942 | 54.9488 |
g32218 | arabidopsis_halleri | g32218.t1 | 93.8983 | 90.5085 | arabis_alpina | KFK35955 | 94.5392 | 91.1263 |
g32218 | arabidopsis_halleri | g32218.t1 | 76.9492 | 63.0508 | quercus_lobata | QL11p029473:mrna | 62.0219 | 50.8197 |
g32218 | arabidopsis_halleri | g32218.t1 | 80.678 | 77.2881 | eutrema_salsugineum | ESQ30475 | 96.748 | 92.6829 |
g32218 | arabidopsis_halleri | g32218.t1 | 69.4915 | 56.9492 | kalanchoe_fedtschenkoi | Kaladp0040s0275.1.v1.1 | 63.8629 | 52.3364 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.4746 | 55.2542 | hordeum_vulgare | HORVU.MOREX.r3.4HG0339390.1 | 68.2432 | 55.0676 |
g32218 | arabidopsis_halleri | g32218.t1 | 79.661 | 65.7627 | rosa_chinensis | PRQ22283 | 78.0731 | 64.4518 |
g32218 | arabidopsis_halleri | g32218.t1 | 56.9492 | 46.1017 | oryza_barthii | OBART03G32890.1 | 75.3363 | 60.9865 |
g32218 | arabidopsis_halleri | g32218.t1 | 58.3051 | 41.6949 | chara_braunii | GBG64947 | 35.0305 | 25.0509 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.9322 | 64.7458 | corymbia_citriodora | cds-KAF8034912.1 | 76.9759 | 65.6357 |
g32218 | arabidopsis_halleri | g32218.t1 | 94.2373 | 88.4746 | brassica_rapa_ro18 | A06p004050.1_BraROA.1 | 91.1475 | 85.5738 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.2542 | 64.0678 | eucalyptus_grandis | KCW56825 | 60.8219 | 51.7808 |
g32218 | arabidopsis_halleri | g32218.t1 | 95.5932 | 92.5424 | camelina_sativa | Csa03g055960.1 | 95.9184 | 92.8571 |
g32218 | arabidopsis_halleri | g32218.t1 | 96.6102 | 94.2373 | camelina_sativa | Csa17g085880.1 | 96.9388 | 94.5578 |
g32218 | arabidopsis_halleri | g32218.t1 | 94.5763 | 92.2034 | camelina_sativa | Csa14g057350.1 | 96.2069 | 93.7931 |
g32218 | arabidopsis_halleri | g32218.t1 | 72.5424 | 55.9322 | daucus_carota | KZN09082 | 71.3333 | 55 |
g32218 | arabidopsis_halleri | g32218.t1 | 57.6271 | 46.4407 | digitaria_exilis | Dexi9B01G0009800.1:cds | 65.8915 | 53.1008 |
g32218 | arabidopsis_halleri | g32218.t1 | 57.9661 | 47.4576 | digitaria_exilis | Dexi9A01G0010210.1:cds | 67.8571 | 55.5556 |
g32218 | arabidopsis_halleri | g32218.t1 | 65.0847 | 52.5424 | eragrostis_tef | Et_4B_037848.CDS | 46.6019 | 37.6214 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 56.6102 | eragrostis_tef | Et_4A_033692.CDS | 61.5152 | 50.6061 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.5932 | triticum_dicoccoides | TRIDC4AG039980.1 | 68.8136 | 55.5932 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.5932 | triticum_dicoccoides | TRIDC4BG009180.1 | 69.2833 | 55.9727 |
g32218 | arabidopsis_halleri | g32218.t1 | 98.983 | 98.3051 | arabidopsis_lyrata | Al_scaffold_0001_4363 | 98.983 | 98.3051 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 56.2712 | saccharum_spontaneum | Sspon.01G0026200-3C-mRNA-1 | 70.7317 | 57.8397 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.9322 | saccharum_spontaneum | Sspon.01G0026200-1A-mRNA-1:cds | 70.7317 | 57.4913 |
g32218 | arabidopsis_halleri | g32218.t1 | 69.1525 | 55.5932 | nymphaea_colorata | NC3G0225380.1:cds | 71.5789 | 57.5439 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.8136 | 55.2542 | echinochloa_crusgalli | scaffold35.291.cds | 68.5811 | 55.0676 |
g32218 | arabidopsis_halleri | g32218.t1 | 69.1525 | 55.9322 | echinochloa_crusgalli | scaffold3.1256.cds | 68.9189 | 55.7432 |
g32218 | arabidopsis_halleri | g32218.t1 | 68.1356 | 54.9153 | echinochloa_crusgalli | scaffold20.858.cds | 68.3673 | 55.102 |
g32218 | arabidopsis_halleri | g32218.t1 | 95.5932 | 90.1695 | brassica_oleracea | Bo6g019800.1 | 95.2703 | 89.8649 |
g32218 | arabidopsis_halleri | g32218.t1 | 78.3051 | 63.7288 | corchorus_capsularis | OMO73856 | 79.6552 | 64.8276 |
g32218 | arabidopsis_halleri | g32218.t1 | 75.5932 | 62.7119 | trifolium_pratense | Tp57577_TGAC_v2_mRNA21863 | 77.1626 | 64.0138 |
g32218 | arabidopsis_halleri | g32218.t1 | 64.0678 | 53.2203 | cynara_cardunculus | KVI01933 | 72.4138 | 60.1533 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |