Description

Ensembl ID g24989 Gene ID Accession -
Symbol Alias - Full Name RNA demethylase ALKBH9B
Status Confidence Length 2346 bases Strand Plus strand
Position FJVB01000148.1 : 271336 - 273681 RNA binding domain 2OG-FeII_Oxy_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g24989 2OG-FeII_Oxy_2 PF13532 6.2e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g24989.t1 1765 507aa g24989.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g24989arabidopsis_hallerig11071.t193.283689.1791arabidopsis_hallerig24989.t149.309747.14
g24989arabidopsis_hallerig24310.t180.120567.4699arabidopsis_hallerig24989.t152.465544.1815
g24989arabidopsis_hallerig31367.t171.487658.2645arabidopsis_hallerig24989.t134.122327.8107
g24989arabidopsis_hallerig03108.t164.68452.7881arabidopsis_hallerig24989.t168.639156.0158
g24989arabidopsis_hallerig10116.t128.012514.554arabidopsis_hallerig24989.t135.305718.3432
g24989arabidopsis_hallerig09513.t134.240420.4082arabidopsis_hallerig24989.t129.78317.7515
g24989arabidopsis_hallerig09047.t131.138817.0819arabidopsis_hallerig24989.t134.516818.9349

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g24989arabidopsis_hallerig24989.t134.911225.0493papaver_somniferumRZC8389246.093833.0729
g24989arabidopsis_hallerig24989.t134.911225.641papaver_somniferumRZC8389355.312540.625
g24989arabidopsis_hallerig24989.t146.351137.2781papaver_somniferumRZC4482548.654239.1304
g24989arabidopsis_hallerig24989.t162.524751.6765papaver_somniferumRZC6664536.478730.1496
g24989arabidopsis_hallerig24989.t167.061155.6213cannabis_sativa_femalecds.evm.model.04.211248.991440.634
g24989arabidopsis_hallerig24989.t128.994122.6824ficus_caricaFCD_00008593-RA:cds50.170639.2491
g24989arabidopsis_hallerig24989.t167.850155.6213citrullus_lanatusCla97C01G019650.138.392931.4732
g24989arabidopsis_hallerig24989.t166.07555.0296cucumis_sativusKGN4890767.134355.9118
g24989arabidopsis_hallerig24989.t165.28655.8185theobroma_cacaoEOX9086664.023254.7389
g24989arabidopsis_hallerig24989.t190.92787.1795arabidopsis_thalianaAT2G17970.190.92787.1795
g24989arabidopsis_hallerig24989.t166.07554.6351cucumis_meloMELO3C007897.2.16755.4
g24989arabidopsis_hallerig24989.t164.102651.4793populus_trichocarpaPotri.005G114800.1.v4.164.229251.581
g24989arabidopsis_hallerig24989.t162.327449.1124populus_trichocarpaPotri.007G012200.1.v4.161.839548.728
g24989arabidopsis_hallerig24989.t176.923168.2446brassica_junceacds.BjuB03g03560S82.278572.9958
g24989arabidopsis_hallerig24989.t175.739666.075brassica_junceacds.BjuA07g02340S82.22771.7345
g24989arabidopsis_hallerig24989.t175.542466.075brassica_napusCDY3814582.012871.7345
g24989arabidopsis_hallerig24989.t177.120367.6529brassica_napusCDY4780478.268.6
g24989arabidopsis_hallerig24989.t164.102652.6627malus_domestica_goldenmRNA:MD02G011380062.862751.6441
g24989arabidopsis_hallerig24989.t166.07554.4379malus_domestica_goldenmRNA:MD15G021560065.686354.1176
g24989arabidopsis_hallerig24989.t138.461532.5444marchantia_polymorphaPTQ5055443.141636.5044
g24989arabidopsis_hallerig24989.t164.891555.4241prunus_dulcisVVA0987164.891555.4241
g24989arabidopsis_hallerig24989.t164.694355.6213prunus_persicaONH9706264.950555.8416
g24989arabidopsis_hallerig24989.t164.102654.2406cajanus_cajanC.cajan_38208.t67.708357.2917
g24989arabidopsis_hallerig24989.t162.721952.86glycine_maxKRH0532561.153851.5385
g24989arabidopsis_hallerig24989.t163.905354.0434glycine_maxKRH1571161.950352.3901
g24989arabidopsis_hallerig24989.t148.520741.0256lupinus_angustifoliusOIW1496066.307356.0647
g24989arabidopsis_hallerig24989.t165.877754.4379lupinus_angustifoliusOIW0399970.464158.2278
g24989arabidopsis_hallerig24989.t163.116453.0572medicago_truncatulaKEH3989061.185551.434
g24989arabidopsis_hallerig24989.t163.313652.2682phaseolus_vulgarisESW3310961.612350.8637
g24989arabidopsis_hallerig24989.t160.946751.4793pisum_sativumPsat6g024280.1.cds58.082749.0602
g24989arabidopsis_hallerig24989.t164.299852.4655vigna_radiataVradi06g13130.168.631656
g24989arabidopsis_hallerig24989.t164.102651.6765vigna_unguiculataVigun08g047600.1.v1.268.710455.3911
g24989arabidopsis_hallerig24989.t163.708151.8738vigna_angularisKOM4876668.143555.4852
g24989arabidopsis_hallerig24989.t166.469455.6213manihot_esculentaOAY6086167.131556.1753
g24989arabidopsis_hallerig24989.t165.28654.4379manihot_esculentaOAY5753563.776553.1792
g24989arabidopsis_hallerig24989.t121.104516.1736capsicum_annuumPHT8899666.049450.6173
g24989arabidopsis_hallerig24989.t158.185447.7318capsicum_annuumPHT9114762.105350.9474
g24989arabidopsis_hallerig24989.t153.451743.1953solanum_tuberosumPGSC0003DMT40006135439.911632.2533
g24989arabidopsis_hallerig24989.t164.891552.2682solanum_tuberosumPGSC0003DMT40000915661.958649.9058
g24989arabidopsis_hallerig24989.t158.382646.3511solanum_lycopersicumSolyc02g062180.3.146.034236.5474
g24989arabidopsis_hallerig24989.t165.088853.4517solanum_lycopersicumSolyc02g083960.3.161.338350.3717
g24989arabidopsis_hallerig24989.t161.735748.1262sesamum_indicumSIN_1025331.t67.311852.4731
g24989arabidopsis_hallerig24989.t166.469455.0296helianthus_annuusmRNA:HanXRQr2_Chr16g077647168.775556.9388
g24989arabidopsis_hallerig24989.t166.07556.4103lactuca_sativacds-PLY96081.162.03752.963
g24989arabidopsis_hallerig24989.t154.437944.7732lolium_perennecds.KYUSt_chr7.3879941.255633.9312
g24989arabidopsis_hallerig24989.t155.621345.3649avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0000733.140.517233.046
g24989arabidopsis_hallerig24989.t155.424145.3649avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0003409.440.606933.237
g24989arabidopsis_hallerig24989.t156.015845.5621avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0003212.142.199134.3239
g24989arabidopsis_hallerig24989.t156.015845.5621avena_sativa_sangAVESA.00010b.r2.5CG0864500.1.CDS43.759635.5932
g24989arabidopsis_hallerig24989.t155.621345.3649avena_sativa_sangAVESA.00010b.r2.7DG1337970.1.CDS43.925235.8255
g24989arabidopsis_hallerig24989.t155.621345.3649avena_sativa_sangAVESA.00010b.r2.7AG1202400.1.CDS43.653335.6037
g24989arabidopsis_hallerig24989.t145.956637.8698oryza_longistaminataKN538905.1_FGP01543.551435.8879
g24989arabidopsis_hallerig24989.t154.437945.1677oryza_rufipogonORUFI06G02440.144.805237.1753
g24989arabidopsis_hallerig24989.t154.437945.1677oryza_brachyanthaOB06G12310.144.87837.2358
g24989arabidopsis_hallerig24989.t156.015845.3649oryza_punctataOPUNC06G02310.145.007936.4501
g24989arabidopsis_hallerig24989.t154.437945.1677oryza_glaberrimaORGLA06G0024500.144.805237.1753
g24989arabidopsis_hallerig24989.t155.029645.9566secale_cerealeSECCE4Rv1G0269920.144.927537.5201
g24989arabidopsis_hallerig24989.t155.226846.1538setaria_viridisTKW1954245.454537.987
g24989arabidopsis_hallerig24989.t154.043444.7732sorghum_bicolorKXG1924944.844537.1522
g24989arabidopsis_hallerig24989.t155.029645.9566setaria_italicaKQL0919745.145637.7023
g24989arabidopsis_hallerig24989.t146.942838.856triticum_aestivumTraesCS4A02G378300.148.571440.2041
g24989arabidopsis_hallerig24989.t154.832345.5621triticum_aestivumTraesCS7A02G081300.145.424837.7451
g24989arabidopsis_hallerig24989.t136.094729.1913triticum_aestivumTraesCS7D02G075200.146.803137.8517
g24989arabidopsis_hallerig24989.t153.846244.1815zea_maysZm00001eb377750_P00244.390236.4228
g24989arabidopsis_hallerig24989.t158.974449.3097ananas_comosusAco018614.1.mrna155.887946.729
g24989arabidopsis_hallerig24989.t146.548338.0671asparagus_officinalisONK8016266.855554.6742
g24989arabidopsis_hallerig24989.t154.832345.5621triticum_turgidumTRITD7Av1G023080.245.424837.7451
g24989arabidopsis_hallerig24989.t154.437945.5621triticum_turgidumTRITD4Av1G238900.144.951137.6222
g24989arabidopsis_hallerig24989.t127.613417.7515amborella_trichopodaERN1078247.457630.5085
g24989arabidopsis_hallerig24989.t163.708153.2544corylus_avellanaCav02g02060.t159.594149.8155
g24989arabidopsis_hallerig24989.t164.694355.4241gossypium_raimondiiKJB4334963.813254.6693
g24989arabidopsis_hallerig24989.t155.029644.9704brachypodium_distachyonKQK1993546.969738.3838
g24989arabidopsis_hallerig24989.t162.130249.5069fraxinus_excelsiorFRAEX38873_v2_000157720.1.cds62.25349.6047
g24989arabidopsis_hallerig24989.t158.974446.5483fraxinus_excelsiorFRAEX38873_v2_000042600.1.cds62.552349.3724
g24989arabidopsis_hallerig24989.t150.690341.6174oryza_glumipatulaOGLUM06G02460.141.451634.0323
g24989arabidopsis_hallerig24989.t154.437945.3649eragrostis_curvulaTVU1274246.700538.9171
g24989arabidopsis_hallerig24989.t154.043445.1677oryza_indicaBGIOSGA022263-PA45.666738.1667
g24989arabidopsis_hallerig24989.t166.272255.0296vitis_viniferaVitvi04g01448_P00165.882454.7059
g24989arabidopsis_hallerig24989.t165.483253.2544nicotiana_attenuataOIT0045161.481550
g24989arabidopsis_hallerig24989.t162.919152.2682coffea_canephoraCDP0190961.346250.9615
g24989arabidopsis_hallerig24989.t164.102651.4793ipomoea_trilobaitb05g24620.t162.260550
g24989arabidopsis_hallerig24989.t161.538550.0986ipomoea_trilobaitb12g02930.t357.142946.5201
g24989arabidopsis_hallerig24989.t136.094729.1913triticum_urartuTuG1812S0003278000.01.T0146.803137.8517
g24989arabidopsis_hallerig24989.t155.226845.5621oryza_meridionalisOMERI06G02350.132.14726.5212
g24989arabidopsis_hallerig24989.t165.088855.2268prunus_aviumPav_sc0000044.1_g620.1.mk:mrna65.476255.5556
g24989arabidopsis_hallerig24989.t154.437945.3649oryza_sativaOs06t0138200-0144.805237.3377
g24989arabidopsis_hallerig24989.t163.905353.0572pistacia_veracds-EVM0014624.164.158453.2673
g24989arabidopsis_hallerig24989.t159.960650.2959quercus_subercds-POF19139.166.960456.1674
g24989arabidopsis_hallerig24989.t157.593748.5207quercus_subercds-POE87187.169.358758.4323
g24989arabidopsis_hallerig24989.t134.71428.9941chenopodium_quinoaAUR62043716-RA:cds77.53364.7577
g24989arabidopsis_hallerig24989.t129.980325.641chenopodium_quinoaAUR62043238-RA:cds91.566378.3133
g24989arabidopsis_hallerig24989.t134.911227.8107chenopodium_quinoaAUR62043611-RA:cds17.472913.9191
g24989arabidopsis_hallerig24989.t160.35549.9014dioscorea_rotundataDRNTG_01859.151.776642.8088
g24989arabidopsis_hallerig24989.t164.49754.6351citrus_clementinaESR3874363.495153.7864
g24989arabidopsis_hallerig24989.t159.368846.7456juglans_regiacds.Jr11_07880_p160.563447.6861
g24989arabidopsis_hallerig24989.t163.313651.2821juglans_regiacds.Jr08_17220_p159.225147.9705
g24989arabidopsis_hallerig24989.t165.483255.8185actinidia_chinensisPSS2135463.969254.5279
g24989arabidopsis_hallerig24989.t163.116453.0572actinidia_chinensisPSS3655255.749146.8641
g24989arabidopsis_hallerig24989.t157.00246.7456leersia_perrieriLPERR06G02170.146.166137.8594
g24989arabidopsis_hallerig24989.t148.126240.0394aegilops_tauschiiAET7Gv20212500.248.897840.6814
g24989arabidopsis_hallerig24989.t159.566148.5207musa_acuminataMa11_p06260.150.082940.796
g24989arabidopsis_hallerig24989.t140.631232.3471selaginella_moellendorffiiEFJ2757867.10153.4202
g24989arabidopsis_hallerig24989.t140.631232.3471selaginella_moellendorffiiEFJ3736671.280356.7474
g24989arabidopsis_hallerig24989.t155.226845.5621panicum_halliiPUZ6228845.901637.8689
g24989arabidopsis_hallerig24989.t175.739667.2584arabis_alpinaKFK4017173.988465.7033
g24989arabidopsis_hallerig24989.t166.272255.0296quercus_lobataQL06p032625:mrna66.666755.3571
g24989arabidopsis_hallerig24989.t180.276174.1617eutrema_salsugineumESQ5066982.723676.4228
g24989arabidopsis_hallerig24989.t164.891552.4655kalanchoe_fedtschenkoiKaladp0040s0535.1.v1.165.148552.6733
g24989arabidopsis_hallerig24989.t117.948715.7791kalanchoe_fedtschenkoiKaladp0016s0357.1.v1.168.421160.1504
g24989arabidopsis_hallerig24989.t154.240645.1677hordeum_vulgareHORVU.MOREX.r3.7HG0647650.145.230337.6645
g24989arabidopsis_hallerig24989.t165.877754.0434rosa_chinensisPRQ4742466.401654.4732
g24989arabidopsis_hallerig24989.t151.676542.2091oryza_barthiiOBART06G02380.147.810239.0511
g24989arabidopsis_hallerig24989.t151.479338.4615chara_brauniiGBG6224416.363612.2257
g24989arabidopsis_hallerig24989.t166.272255.6213corymbia_citriodoracds-KAF8011161.166.011855.4028
g24989arabidopsis_hallerig24989.t177.514867.2584brassica_rapa_ro18A07p004030.1_BraROA.179.554769.0283
g24989arabidopsis_hallerig24989.t161.538547.7318olea_europaeaOE9A046349C162.448.4
g24989arabidopsis_hallerig24989.t164.299849.5069olea_europaeaOE9A078511C164.682549.8016
g24989arabidopsis_hallerig24989.t152.662744.5759eucalyptus_grandisKCW5314267.254456.927
g24989arabidopsis_hallerig24989.t184.615477.5148camelina_sativaCsa19g054940.185.628778.4431
g24989arabidopsis_hallerig24989.t183.43276.9231camelina_sativaCsa15g076400.184.678
g24989arabidopsis_hallerig24989.t159.368856.0158camelina_sativaCsa01g039680.190.390485.2853
g24989arabidopsis_hallerig24989.t161.735751.2821daucus_carotaKZM9113564.536153.6082
g24989arabidopsis_hallerig24989.t134.71428.2051digitaria_exilisDexi4A01G0002540.1:cds35.341428.7149
g24989arabidopsis_hallerig24989.t150.493140.8284digitaria_exilisDexi4B01G0002690.1:cds37.702530.486
g24989arabidopsis_hallerig24989.t155.621344.9704eragrostis_tefEt_2B_019781.CDS46.305437.4384
g24989arabidopsis_hallerig24989.t156.21345.3649eragrostis_tefEt_2A_015607.CDS46.416937.4593
g24989arabidopsis_hallerig24989.t155.029645.9566triticum_dicoccoidesTRIDC7AG009160.24537.5806
g24989arabidopsis_hallerig24989.t155.029645.5621triticum_dicoccoidesTRIDC4AG060930.345.439737.6222
g24989arabidopsis_hallerig24989.t188.757485.9961arabidopsis_lyratafgenesh2_kg.3__3396__AT2G17970.19087.2
g24989arabidopsis_hallerig24989.t153.057244.9704saccharum_spontaneumSspon.08G0015910-2B-mRNA-1:cds50.563942.8571
g24989arabidopsis_hallerig24989.t146.153837.2781nymphaea_colorataNC2G0286860.1:cds54.292343.8515
g24989arabidopsis_hallerig24989.t155.424145.9566echinochloa_crusgalliscaffold34.604.cds45.691137.8862
g24989arabidopsis_hallerig24989.t155.424146.3511echinochloa_crusgalliscaffold507.16.cds45.91538.3987
g24989arabidopsis_hallerig24989.t155.818545.3649echinochloa_crusgalliscaffold10.133.cds28.643723.2794
g24989arabidopsis_hallerig24989.t175.542466.2722brassica_oleraceaBo7g012800.181.837671.7949
g24989arabidopsis_hallerig24989.t165.877755.6213corchorus_capsularisOMO5705764.980554.8638
g24989arabidopsis_hallerig24989.t154.437945.1677oryza_nivaraONIVA06G02940.144.805237.1753
g24989arabidopsis_hallerig24989.t164.299852.86trifolium_pratenseTp57577_TGAC_v2_mRNA4016360.934650.0935
g24989arabidopsis_hallerig24989.t162.919151.8738cynara_cardunculusKVI0293964.574953.2389

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression