Description

Ensembl ID g24310 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 2028 bases Strand Plus strand
Position FJVB01000138.1 : 280325 - 282352 RNA binding domain 2OG-FeII_Oxy_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g24310 2OG-FeII_Oxy_2 PF13532 4.7e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g24310.t1 1468 332aa g24310.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g24310arabidopsis_hallerig24989.t152.465544.1815arabidopsis_hallerig24310.t180.120567.4699
g24310arabidopsis_hallerig11071.t180.970170.1493arabidopsis_hallerig24310.t165.361456.6265
g24310arabidopsis_hallerig31367.t161.983551.6529arabidopsis_hallerig24310.t145.180737.6506
g24310arabidopsis_hallerig03108.t145.53939.777arabidopsis_hallerig24310.t173.795264.4578
g24310arabidopsis_hallerig10116.t122.222212.5196arabidopsis_hallerig24310.t142.771124.0964
g24310arabidopsis_hallerig09513.t129.93217.0068arabidopsis_hallerig24310.t139.75922.5904
g24310arabidopsis_hallerig09047.t124.377214.5907arabidopsis_hallerig24310.t141.265124.6988

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g24310arabidopsis_hallerig24310.t149.698834.9398papaver_somniferumRZC8389242.968830.2083
g24310arabidopsis_hallerig24310.t150.301235.241papaver_somniferumRZC8389352.187536.5625
g24310arabidopsis_hallerig24310.t152.108440.9639papaver_somniferumRZC4482535.817828.1574
g24310arabidopsis_hallerig24310.t168.674757.8313papaver_somniferumRZC6664526.237122.0944
g24310arabidopsis_hallerig24310.t173.795261.1446cannabis_sativa_femalecds.evm.model.04.211235.302629.2507
g24310arabidopsis_hallerig24310.t127.108420.7831ficus_caricaFCD_00008593-RA:cds30.716723.5495
g24310arabidopsis_hallerig24310.t175.602463.253citrullus_lanatusCla97C01G019650.128.013423.4375
g24310arabidopsis_hallerig24310.t176.204864.4578cucumis_sativusKGN4890750.701442.8858
g24310arabidopsis_hallerig24310.t175.903662.6506theobroma_cacaoEOX9086648.742740.2321
g24310arabidopsis_hallerig24310.t184.638678.9157arabidopsis_thalianaAT1G48980.184.894379.1541
g24310arabidopsis_hallerig24310.t174.698862.9518cucumis_meloMELO3C007897.2.149.641.8
g24310arabidopsis_hallerig24310.t173.795261.4458populus_trichocarpaPotri.005G114800.1.v4.148.41940.3162
g24310arabidopsis_hallerig24310.t173.49457.2289populus_trichocarpaPotri.007G012200.1.v4.147.749537.182
g24310arabidopsis_hallerig24310.t175.602465.3614brassica_junceacds.BjuA06g38420S82.026170.915
g24310arabidopsis_hallerig24310.t171.084362.6506brassica_junceacds.BjuB04g03510S82.2372.4739
g24310arabidopsis_hallerig24310.t176.204865.3614brassica_napusCDY6284748.936241.9729
g24310arabidopsis_hallerig24310.t174.698865.0602brassica_napusCDY5117347.969141.7795
g24310arabidopsis_hallerig24310.t171.686758.7349malus_domestica_goldenmRNA:MD02G011380046.034837.7176
g24310arabidopsis_hallerig24310.t174.698862.0482malus_domestica_goldenmRNA:MD15G021560048.627540.3922
g24310arabidopsis_hallerig24310.t153.313343.3735marchantia_polymorphaPTQ5055439.159331.8584
g24310arabidopsis_hallerig24310.t173.795261.4458prunus_dulcisVVA0987148.323540.2367
g24310arabidopsis_hallerig24310.t173.49461.1446prunus_persicaONH9706248.316840.198
g24310arabidopsis_hallerig24310.t170.783159.9398cajanus_cajanC.cajan_38208.t48.958341.4583
g24310arabidopsis_hallerig24310.t172.289259.3373glycine_maxKRH0532546.153837.8846
g24310arabidopsis_hallerig24310.t171.385559.3373glycine_maxKRH1571145.315537.6673
g24310arabidopsis_hallerig24310.t163.855454.8193lupinus_angustifoliusOIW1496057.142949.0566
g24310arabidopsis_hallerig24310.t174.096461.1446lupinus_angustifoliusOIW0399951.898742.827
g24310arabidopsis_hallerig24310.t172.891661.1446medicago_truncatulaKEH3989046.271538.8145
g24310arabidopsis_hallerig24310.t172.289259.3373phaseolus_vulgarisESW3310946.065337.8119
g24310arabidopsis_hallerig24310.t172.289259.9398pisum_sativumPsat6g024280.1.cds45.112837.406
g24310arabidopsis_hallerig24310.t172.289260.241vigna_radiataVradi06g13130.150.526342.1053
g24310arabidopsis_hallerig24310.t171.385558.7349vigna_unguiculataVigun08g047600.1.v1.250.105741.2262
g24310arabidopsis_hallerig24310.t172.289260.241vigna_angularisKOM4876650.632942.1941
g24310arabidopsis_hallerig24310.t174.096461.747manihot_esculentaOAY6086149.00440.8367
g24310arabidopsis_hallerig24310.t17561.4458manihot_esculentaOAY5753547.976939.3064
g24310arabidopsis_hallerig24310.t126.204821.3855capsicum_annuumPHT8899653.703743.8272
g24310arabidopsis_hallerig24310.t167.469957.2289capsicum_annuumPHT9114747.157940
g24310arabidopsis_hallerig24310.t162.951853.012solanum_tuberosumPGSC0003DMT40006135430.780625.9205
g24310arabidopsis_hallerig24310.t172.289260.241solanum_tuberosumPGSC0003DMT40000915645.197737.6648
g24310arabidopsis_hallerig24310.t169.879557.2289solanum_lycopersicumSolyc02g062180.3.136.080929.549
g24310arabidopsis_hallerig24310.t172.289259.9398solanum_lycopersicumSolyc02g083960.3.144.609736.9888
g24310arabidopsis_hallerig24310.t175.602461.4458sesamum_indicumSIN_1025331.t53.978543.871
g24310arabidopsis_hallerig24310.t175.602462.6506helianthus_annuusmRNA:HanXRQr2_Chr16g077647151.224542.449
g24310arabidopsis_hallerig24310.t17562.6506lactuca_sativacds-PLY96081.146.111138.5185
g24310arabidopsis_hallerig24310.t165.963953.9157lolium_perennecds.KYUSt_chr7.3879932.735426.7564
g24310arabidopsis_hallerig24310.t166.867553.3133avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0000733.131.896625.431
g24310arabidopsis_hallerig24310.t166.566353.3133avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0003409.431.936425.578
g24310arabidopsis_hallerig24310.t167.168753.6145avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0003212.133.135226.4487
g24310arabidopsis_hallerig24310.t167.168753.6145avena_sativa_sangAVESA.00010b.r2.5CG0864500.1.CDS34.360627.4268
g24310arabidopsis_hallerig24310.t166.867553.3133avena_sativa_sangAVESA.00010b.r2.7DG1337970.1.CDS34.579427.5701
g24310arabidopsis_hallerig24310.t166.867553.3133avena_sativa_sangAVESA.00010b.r2.7AG1202400.1.CDS34.365327.3994
g24310arabidopsis_hallerig24310.t156.325346.0843oryza_longistaminataKN538905.1_FGP01534.953328.5981
g24310arabidopsis_hallerig24310.t167.168755.4217oryza_rufipogonORUFI06G02440.136.201329.8701
g24310arabidopsis_hallerig24310.t167.168754.5181oryza_brachyanthaOB06G12310.136.260229.4309
g24310arabidopsis_hallerig24310.t167.469954.8193oryza_punctataOPUNC06G02310.135.499228.8431
g24310arabidopsis_hallerig24310.t167.469955.4217oryza_glaberrimaORGLA06G0024500.136.363629.8701
g24310arabidopsis_hallerig24310.t166.867554.8193secale_cerealeSECCE4Rv1G0269920.135.748829.3076
g24310arabidopsis_hallerig24310.t167.771154.2169setaria_viridisTKW1954236.52629.2208
g24310arabidopsis_hallerig24310.t165.662753.3133sorghum_bicolorKXG1924935.679228.9689
g24310arabidopsis_hallerig24310.t167.469953.9157setaria_italicaKQL0919736.24628.9644
g24310arabidopsis_hallerig24310.t163.25351.8072triticum_aestivumTraesCS4A02G378300.142.857135.102
g24310arabidopsis_hallerig24310.t165.361454.5181triticum_aestivumTraesCS7A02G081300.135.457529.5752
g24310arabidopsis_hallerig24310.t146.385537.9518triticum_aestivumTraesCS7D02G075200.139.386232.2251
g24310arabidopsis_hallerig24310.t165.060253.3133zea_maysZm00001eb377750_P00235.12228.7805
g24310arabidopsis_hallerig24310.t170.783158.4337ananas_comosusAco018614.1.mrna143.925236.2617
g24310arabidopsis_hallerig24310.t156.325345.1807asparagus_officinalisONK8016252.974542.4929
g24310arabidopsis_hallerig24310.t165.361454.5181triticum_turgidumTRITD7Av1G023080.235.457529.5752
g24310arabidopsis_hallerig24310.t166.265154.5181triticum_turgidumTRITD4Av1G238900.135.830629.4788
g24310arabidopsis_hallerig24310.t131.927720.7831amborella_trichopodaERN1078235.932223.3898
g24310arabidopsis_hallerig24310.t174.397661.1446corylus_avellanaCav02g02060.t145.57237.4539
g24310arabidopsis_hallerig24310.t173.192862.3494gossypium_raimondiiKJB4334947.276340.2724
g24310arabidopsis_hallerig24310.t166.566354.2169brachypodium_distachyonKQK1993537.205430.303
g24310arabidopsis_hallerig24310.t171.084358.7349fraxinus_excelsiorFRAEX38873_v2_000157720.1.cds46.640338.5375
g24310arabidopsis_hallerig24310.t169.879555.7229fraxinus_excelsiorFRAEX38873_v2_000042600.1.cds48.535638.7029
g24310arabidopsis_hallerig24310.t162.650651.2048oryza_glumipatulaOGLUM06G02460.133.548427.4194
g24310arabidopsis_hallerig24310.t166.867553.3133eragrostis_curvulaTVU1274237.563529.9492
g24310arabidopsis_hallerig24310.t167.168755.4217oryza_indicaBGIOSGA022263-PA37.166730.6667
g24310arabidopsis_hallerig24310.t176.204862.3494vitis_viniferaVitvi04g01448_P00149.607840.5882
g24310arabidopsis_hallerig24310.t173.795261.747nicotiana_attenuataOIT0045145.370437.963
g24310arabidopsis_hallerig24310.t171.686760.241coffea_canephoraCDP0190945.769238.4615
g24310arabidopsis_hallerig24310.t173.49460.8434ipomoea_trilobaitb05g24620.t146.743338.6973
g24310arabidopsis_hallerig24310.t171.686758.4337ipomoea_trilobaitb12g02930.t343.589735.5311
g24310arabidopsis_hallerig24310.t146.385538.253triticum_urartuTuG1812S0003278000.01.T0139.386232.4808
g24310arabidopsis_hallerig24310.t167.771155.4217oryza_meridionalisOMERI06G02350.125.832421.1251
g24310arabidopsis_hallerig24310.t173.49461.4458prunus_aviumPav_sc0000044.1_g620.1.mk:mrna48.412740.4762
g24310arabidopsis_hallerig24310.t167.168755.4217oryza_sativaOs06t0138200-0136.201329.8701
g24310arabidopsis_hallerig24310.t17564.1566pistacia_veracds-EVM0014624.149.306942.1782
g24310arabidopsis_hallerig24310.t170.783159.6386quercus_subercds-POF19139.151.762143.6123
g24310arabidopsis_hallerig24310.t168.373558.7349quercus_subercds-POE87187.153.919246.3183
g24310arabidopsis_hallerig24310.t145.783137.6506chenopodium_quinoaAUR62043716-RA:cds66.960455.0661
g24310arabidopsis_hallerig24310.t142.469935.5422chenopodium_quinoaAUR62043238-RA:cds84.939871.0843
g24310arabidopsis_hallerig24310.t145.481937.3494chenopodium_quinoaAUR62043611-RA:cds14.906212.2409
g24310arabidopsis_hallerig24310.t170.180757.8313dioscorea_rotundataDRNTG_01859.139.424732.4873
g24310arabidopsis_hallerig24310.t173.192862.9518citrus_clementinaESR3874347.184540.5825
g24310arabidopsis_hallerig24310.t171.385556.6265juglans_regiacds.Jr11_07880_p147.686137.827
g24310arabidopsis_hallerig24310.t171.98858.4337juglans_regiacds.Jr08_17220_p144.095935.7934
g24310arabidopsis_hallerig24310.t177.108463.5542actinidia_chinensisPSS2135449.325640.6551
g24310arabidopsis_hallerig24310.t174.397660.5422actinidia_chinensisPSS3655243.031435.0174
g24310arabidopsis_hallerig24310.t168.373555.7229leersia_perrieriLPERR06G02170.136.26229.5527
g24310arabidopsis_hallerig24310.t162.951851.2048aegilops_tauschiiAET7Gv20212500.241.883834.0681
g24310arabidopsis_hallerig24310.t171.385559.0361musa_acuminataMa11_p06260.139.303532.5041
g24310arabidopsis_hallerig24310.t156.024146.0843selaginella_moellendorffiiEFJ2757860.586349.8371
g24310arabidopsis_hallerig24310.t156.024146.0843selaginella_moellendorffiiEFJ3736664.359952.9412
g24310arabidopsis_hallerig24310.t166.566354.5181panicum_halliiPUZ6228836.229529.6721
g24310arabidopsis_hallerig24310.t176.807267.1687arabis_alpinaKFK3605148.387142.315
g24310arabidopsis_hallerig24310.t173.795262.0482quercus_lobataQL06p032625:mrna48.611140.873
g24310arabidopsis_hallerig24310.t172.289264.759eutrema_salsugineumESQ306094843
g24310arabidopsis_hallerig24310.t172.289259.0361kalanchoe_fedtschenkoiKaladp0040s0535.1.v1.147.524838.8119
g24310arabidopsis_hallerig24310.t125.602422.8916kalanchoe_fedtschenkoiKaladp0016s0357.1.v1.163.909857.1429
g24310arabidopsis_hallerig24310.t164.75954.2169hordeum_vulgareHORVU.MOREX.r3.7HG0647650.135.361829.6053
g24310arabidopsis_hallerig24310.t173.192860.8434rosa_chinensisPRQ4742448.310140.159
g24310arabidopsis_hallerig24310.t165.361454.5181oryza_barthiiOBART06G02380.139.598533.0292
g24310arabidopsis_hallerig24310.t162.349448.1928chara_brauniiGBG6224412.978110.0313
g24310arabidopsis_hallerig24310.t176.204862.9518corymbia_citriodoracds-KAF8011161.149.705341.0609
g24310arabidopsis_hallerig24310.t176.204865.3614brassica_rapa_ro18A06p004800.1_BraROA.148.936241.9729
g24310arabidopsis_hallerig24310.t170.180755.7229olea_europaeaOE9A046349C146.637
g24310arabidopsis_hallerig24310.t171.98859.9398olea_europaeaOE9A078511C147.420639.4841
g24310arabidopsis_hallerig24310.t162.048250eucalyptus_grandisKCW5314251.889241.8136
g24310arabidopsis_hallerig24310.t174.698861.1446daucus_carotaKZM9113551.13441.8557
g24310arabidopsis_hallerig24310.t140.662730.1205digitaria_exilisDexi4A01G0002540.1:cds27.108420.0803
g24310arabidopsis_hallerig24310.t163.25348.7952digitaria_exilisDexi4B01G0002690.1:cds30.927823.8586
g24310arabidopsis_hallerig24310.t169.277153.6145eragrostis_tefEt_2B_019781.CDS37.766829.2282
g24310arabidopsis_hallerig24310.t168.975953.3133eragrostis_tefEt_2A_015607.CDS37.296428.8274
g24310arabidopsis_hallerig24310.t166.867554.8193triticum_dicoccoidesTRIDC7AG009160.235.806429.3548
g24310arabidopsis_hallerig24310.t166.265154.5181triticum_dicoccoidesTRIDC4AG060930.335.830629.4788
g24310arabidopsis_hallerig24310.t191.265189.1566arabidopsis_lyratafgenesh1_pm.C_scaffold_100310790.447888.3582
g24310arabidopsis_hallerig24310.t165.060253.3133saccharum_spontaneumSspon.08G0015910-2B-mRNA-1:cds40.601533.2707
g24310arabidopsis_hallerig24310.t153.915742.4699nymphaea_colorataNC2G0286860.1:cds41.531332.7146
g24310arabidopsis_hallerig24310.t168.674754.8193echinochloa_crusgalliscaffold34.604.cds37.073229.5935
g24310arabidopsis_hallerig24310.t168.373555.1205echinochloa_crusgalliscaffold507.16.cds37.091529.902
g24310arabidopsis_hallerig24310.t168.975954.5181echinochloa_crusgalliscaffold10.133.cds23.178118.3198
g24310arabidopsis_hallerig24310.t174.698865.0602brassica_oleraceaBo6g016930.147.969141.7795
g24310arabidopsis_hallerig24310.t174.397662.0482corchorus_capsularisOMO5705748.054540.0778
g24310arabidopsis_hallerig24310.t167.168755.1205oryza_nivaraONIVA06G02940.136.201329.7078
g24310arabidopsis_hallerig24310.t173.49458.7349trifolium_pratenseTp57577_TGAC_v2_mRNA4016345.607536.4486
g24310arabidopsis_hallerig24310.t169.578356.9277cynara_cardunculusKVI0293946.761138.2591

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression