Description

Ensembl ID g22376 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 2340 bases Strand Minus strand
Position FJVB01000112.1 : 352390 - 354729 RNA binding domain RNase_HII
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g22376 RNase_HII PF01351 1.4e-51 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g22376.t1 1322 296aa g22376.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g22376

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g22376arabidopsis_hallerig22376.t126.351416.2162chondrus_crispusCDF4052632.911420.2532
g22376arabidopsis_hallerig22376.t160.135139.8649chlamydomonas_reinhardtiiPNW6999656.86937.6997
g22376arabidopsis_hallerig22376.t187.162274.3243papaver_somniferumRZC7839286.287673.5786
g22376arabidopsis_hallerig22376.t184.459570.6081cannabis_sativa_femalecds.evm.model.02.200885.03471.0884
g22376arabidopsis_hallerig22376.t168.581156.4189physcomitrium_patensPp3c13_7860V3.171.478958.8028
g22376arabidopsis_hallerig22376.t187.575ficus_caricaFCD_00022253-RA:cds88.395975.7679
g22376arabidopsis_hallerig22376.t180.405469.5946beta_vulgarisKMS9510479.865869.1275
g22376arabidopsis_hallerig22376.t185.47371.2838citrullus_lanatusCla97C07G142670.185.185271.0438
g22376arabidopsis_hallerig22376.t185.810871.9595cucumis_sativusKGN5309085.521971.7172
g22376arabidopsis_hallerig22376.t185.47371.9595theobroma_cacaoEOY1917684.899371.4765
g22376arabidopsis_hallerig22376.t198.648796.9595arabidopsis_thalianaAT2G25100.198.648796.9595
g22376arabidopsis_hallerig22376.t185.47370.9459cucumis_meloMELO3C017716.2.185.185270.7071
g22376arabidopsis_hallerig22376.t187.837873.6487populus_trichocarpaPotri.008G019800.1.v4.187.542173.4007
g22376arabidopsis_hallerig22376.t193.243289.527brassica_napusCDY5570493.877590.1361
g22376arabidopsis_hallerig22376.t193.581189.527brassica_napusCDY6887294.217790.1361
g22376arabidopsis_hallerig22376.t185.810872.973malus_domestica_goldenmRNA:MD02G021850084.949872.2408
g22376arabidopsis_hallerig22376.t168.918954.3919marchantia_polymorphaPTQ4801271.328756.2937
g22376arabidopsis_hallerig22376.t185.135170.6081prunus_dulcisVVA3091684.848570.3704
g22376arabidopsis_hallerig22376.t185.47370.6081prunus_persicaONI2148985.185270.3704
g22376arabidopsis_hallerig22376.t183.783872.6351cajanus_cajanC.cajan_08090.t83.501772.3906
g22376arabidopsis_hallerig22376.t183.783871.9595glycine_maxKRH3601183.501771.7172
g22376arabidopsis_hallerig22376.t141.216235.473glycine_maxKRH4955474.846664.4172
g22376arabidopsis_hallerig22376.t171.959559.1216lupinus_angustifoliusOIV9095675.531962.0567
g22376arabidopsis_hallerig22376.t183.783872.6351lupinus_angustifoliusOIW0699481.848270.9571
g22376arabidopsis_hallerig22376.t185.135169.9324medicago_truncatulaKEH4430084.563869.4631
g22376arabidopsis_hallerig22376.t184.459571.6216phaseolus_vulgarisESW1485483.61270.903
g22376arabidopsis_hallerig22376.t169.594655.4054pisum_sativumPsat0s4121g0080.1.cds75.182559.854
g22376arabidopsis_hallerig22376.t133.783827.027pisum_sativumPsat4g059000.3.cds67.114153.6913
g22376arabidopsis_hallerig22376.t170.945959.4595vigna_radiataVradi08g21720.180.769267.6923
g22376arabidopsis_hallerig22376.t184.121670.6081vigna_unguiculataVigun07g274500.1.v1.283.55770.1342
g22376arabidopsis_hallerig22376.t183.108170.6081vigna_angularisKOM3636882.550370.1342
g22376arabidopsis_hallerig22376.t176.351363.8514manihot_esculentaOAY3903480.714367.5
g22376arabidopsis_hallerig22376.t185.135171.6216capsicum_annuumPHT6529585.135171.6216
g22376arabidopsis_hallerig22376.t185.47371.2838solanum_tuberosumPGSC0003DMT40006157785.185271.0438
g22376arabidopsis_hallerig22376.t185.47371.2838solanum_lycopersicumSolyc11g006860.2.185.185271.0438
g22376arabidopsis_hallerig22376.t180.743268.5811helianthus_annuusmRNA:HanXRQr2_Chr14g066061180.471468.3502
g22376arabidopsis_hallerig22376.t179.729767.5676lactuca_sativacds-PLY82524.15950
g22376arabidopsis_hallerig22376.t182.094668.9189lolium_perennecds.KYUSt_chr5.135608168
g22376arabidopsis_hallerig22376.t182.432468.9189avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0001758.267.03356.044
g22376arabidopsis_hallerig22376.t181.756869.5946avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0001278.363.852254.3536
g22376arabidopsis_hallerig22376.t182.094668.5811avena_sativa_sangAVESA.00010b.r2.5AG0830210.1.CDS8167.6667
g22376arabidopsis_hallerig22376.t182.770369.5946avena_sativa_sangAVESA.00010b.r2.5CG0905390.1.CDS81.666768.6667
g22376arabidopsis_hallerig22376.t182.432468.9189avena_sativa_sangAVESA.00010b.r2.5DG0978990.2.CDS81.333368
g22376arabidopsis_hallerig22376.t182.432470.2703oryza_longistaminataKN538699.1_FGP08581.879269.7987
g22376arabidopsis_hallerig22376.t182.770369.5946oryza_rufipogonORUFI11G03390.182.214869.1275
g22376arabidopsis_hallerig22376.t182.432470.6081oryza_brachyanthaOB11G12800.164.04254.8556
g22376arabidopsis_hallerig22376.t182.770369.9324oryza_punctataOPUNC11G03160.181.395368.7708
g22376arabidopsis_hallerig22376.t182.770370.2703oryza_glaberrimaORGLA11G0032400.182.214869.7987
g22376arabidopsis_hallerig22376.t181.418967.9054secale_cerealeSECCE5Rv1G0316580.178.758265.6863
g22376arabidopsis_hallerig22376.t157.432447.973setaria_viridisTKW0787881.730868.2692
g22376arabidopsis_hallerig22376.t183.108169.2568setaria_viridisTKW0750381.727668.1063
g22376arabidopsis_hallerig22376.t183.783869.2568sorghum_bicolorEER8886583.501769.0236
g22376arabidopsis_hallerig22376.t183.445968.9189sorghum_bicolorEES1568983.16568.6869
g22376arabidopsis_hallerig22376.t183.108169.2568setaria_italicaKQK9995354.065945.0549
g22376arabidopsis_hallerig22376.t183.108168.9189setaria_italicaKQK9965081.727667.7741
g22376arabidopsis_hallerig22376.t182.094667.5676zea_maysZm00001eb406890_P00481.818267.3401
g22376arabidopsis_hallerig22376.t124.662220.6081zea_maysZm00001eb407010_P00187.951873.494
g22376arabidopsis_hallerig22376.t175.675764.527ananas_comosusAco023038.1.mrna175.167864.094
g22376arabidopsis_hallerig22376.t173.986560.8108asparagus_officinalisONK5713679.636465.4545
g22376arabidopsis_hallerig22376.t181.756867.9054triticum_turgidumTRITD5Av1G096400.179.344365.9016
g22376arabidopsis_hallerig22376.t181.418967.9054triticum_turgidumTRITD5Bv1G078260.179.016465.9016
g22376arabidopsis_hallerig22376.t154.391940.2027caenorhabditis_elegansT13H5.7.154.208840.0673
g22376arabidopsis_hallerig22376.t159.121643.2432drosophila_melanogasterFBpp007775050.432336.8876
g22376arabidopsis_hallerig22376.t181.756869.5946amborella_trichopodaERN1301280.936568.8963
g22376arabidopsis_hallerig22376.t186.824373.3108gossypium_raimondiiKJB6040686.53273.064
g22376arabidopsis_hallerig22376.t182.094667.5676brachypodium_distachyonKQJ9219781.270966.8896
g22376arabidopsis_hallerig22376.t157.432441.5541homo_sapiensENSP0000022148656.856241.1371
g22376arabidopsis_hallerig22376.t186.824371.2838fraxinus_excelsiorFRAEX38873_v2_000272050.1.cds86.53271.0438
g22376arabidopsis_hallerig22376.t182.770370.2703oryza_glumipatulaOGLUM11G03130.182.214869.7987
g22376arabidopsis_hallerig22376.t157.770348.6486eragrostis_curvulaTVU2687678.082265.7534
g22376arabidopsis_hallerig22376.t168.243255.4054eragrostis_curvulaTVU2687582.113866.6667
g22376arabidopsis_hallerig22376.t182.770369.5946oryza_indicaBGIOSGA034821-PA82.214869.1275
g22376arabidopsis_hallerig22376.t187.162273.9865vitis_viniferaVitvi13g00975_P00286.868773.7374
g22376arabidopsis_hallerig22376.t186.824371.2838coffea_canephoraCDO9991686.53271.0438
g22376arabidopsis_hallerig22376.t184.459571.2838ipomoea_trilobaitb12g21590.t183.892670.8054
g22376arabidopsis_hallerig22376.t181.756867.9054triticum_urartuTuG1812G0500001343.01.T0179.344365.9016
g22376arabidopsis_hallerig22376.t182.094669.5946oryza_meridionalisOMERI11G03200.181.543669.1275
g22376arabidopsis_hallerig22376.t185.47371.6216prunus_aviumPav_sc0000123.1_g650.1.mk:mrna85.185271.3805
g22376arabidopsis_hallerig22376.t182.770369.5946oryza_sativaOs11t0153900-0182.214869.1275
g22376arabidopsis_hallerig22376.t174.662264.527pistacia_veracds-EVM0009726.185.328273.7452
g22376arabidopsis_hallerig22376.t186.486572.6351quercus_subercds-POF08904.185.618771.9064
g22376arabidopsis_hallerig22376.t131.081116.8919galdieria_sulphurariaEME3264230.564816.6113
g22376arabidopsis_hallerig22376.t157.770340.8784ciona_savignyiENSCSAVP0000001856558.561641.4384
g22376arabidopsis_hallerig22376.t173.310858.7838chenopodium_quinoaAUR62041514-RA:cds53.056242.5428
g22376arabidopsis_hallerig22376.t178.040566.8919chenopodium_quinoaAUR62042081-RA:cds78.571467.3469
g22376arabidopsis_hallerig22376.t184.459571.2838dioscorea_rotundataDRNTG_02289.183.892670.8054
g22376arabidopsis_hallerig22376.t180.743270.6081citrus_clementinaESR5897880.471470.3704
g22376arabidopsis_hallerig22376.t186.824373.3108juglans_regiacds.Jr14_04870_p172.394461.1268
g22376arabidopsis_hallerig22376.t131.081118.5811ostreococcus_lucimarinusABO9896748.677229.1005
g22376arabidopsis_hallerig22376.t151.351436.1486saccharomyces_cerevisiaeYNL072W49.511434.8534
g22376arabidopsis_hallerig22376.t181.081169.2568leersia_perrieriLPERR11G02930.162.827253.6649
g22376arabidopsis_hallerig22376.t174.324362.1622aegilops_tauschiiAET5Gv20346300.166.666755.7576
g22376arabidopsis_hallerig22376.t180.405467.5676musa_acuminataMa02_p02890.180.405467.5676
g22376arabidopsis_hallerig22376.t161.824350.3378selaginella_moellendorffiiEFJ1648670.114957.0881
g22376arabidopsis_hallerig22376.t159.121648.6486selaginella_moellendorffiiEFJ3219648.476539.8892
g22376arabidopsis_hallerig22376.t182.432467.9054panicum_halliiPUZ6300681.063166.7774
g22376arabidopsis_hallerig22376.t187.572.973quercus_lobataQL04p046731:mrna86.622172.2408
g22376arabidopsis_hallerig22376.t187.837883.7838eutrema_salsugineumESQ4655994.545590.1818
g22376arabidopsis_hallerig22376.t167.905453.7162kalanchoe_fedtschenkoiKaladp0278s0019.1.v1.166.777452.8239
g22376arabidopsis_hallerig22376.t180.743267.9054hordeum_vulgareHORVU.MOREX.r3.5HG0460390.178.360765.9016
g22376arabidopsis_hallerig22376.t185.135170.9459rosa_chinensisPRQ3275685.423771.1864
g22376arabidopsis_hallerig22376.t182.770370.2703oryza_barthiiOBART11G03500.182.214869.7987
g22376arabidopsis_hallerig22376.t143.918935.473chara_brauniiGBG7963167.708354.6875
g22376arabidopsis_hallerig22376.t187.162275.3378corymbia_citriodoracds-KAF8021812.187.162275.3378
g22376arabidopsis_hallerig22376.t193.581189.1892brassica_rapa_ro18A04p024960.1_BraROA.194.217789.7959
g22376arabidopsis_hallerig22376.t186.148770.6081olea_europaeaOE9A035593C185.858670.3704
g22376arabidopsis_hallerig22376.t187.162274.3243eucalyptus_grandisKCW6519555.603447.4138
g22376arabidopsis_hallerig22376.t155.067635.8108cyanidioschyzon_merolaeCMK297CT49.695132.3171
g22376arabidopsis_hallerig22376.t198.310896.2838camelina_sativaCsa09g090300.198.310896.2838
g22376arabidopsis_hallerig22376.t198.310896.9595camelina_sativaCsa07g055140.198.310896.9595
g22376arabidopsis_hallerig22376.t193.581192.5676camelina_sativaCsa16g046730.196.853195.8042
g22376arabidopsis_hallerig22376.t185.810871.6216daucus_carotaKZN0551785.521971.3805
g22376arabidopsis_hallerig22376.t164.52754.3919daucus_carotaKZN0552681.276668.5106
g22376arabidopsis_hallerig22376.t160.135151.0135digitaria_exilisDexi3A01G0003390.1:cds59.932750.8418
g22376arabidopsis_hallerig22376.t160.135148.9865digitaria_exilisDexi2B01G0016500.1:cds52.662742.8994
g22376arabidopsis_hallerig22376.t162.551.6892digitaria_exilisDexi3B01G0003420.1:cds67.02955.4348
g22376arabidopsis_hallerig22376.t148.986540.8784digitaria_exilisDexi2A01G0017490.1:cds79.670366.4835
g22376arabidopsis_hallerig22376.t182.432469.2568eragrostis_tefEt_6B_048946.CDS81.879268.7919
g22376arabidopsis_hallerig22376.t182.770370.2703eragrostis_tefEt_6A_047219.CDS82.214869.7987
g22376arabidopsis_hallerig22376.t199.324398.3108arabidopsis_lyrataAl_scaffold_0004_57799.324398.3108
g22376arabidopsis_hallerig22376.t177.364963.8514saccharum_spontaneumSspon.08G0002980-1A-mRNA-1:cds73.87160.9677
g22376arabidopsis_hallerig22376.t184.459573.3108nymphaea_colorataNC13G0196310.1:cds84.459573.3108
g22376arabidopsis_hallerig22376.t183.108168.9189echinochloa_crusgalliscaffold83.170.cds81.188167.3267
g22376arabidopsis_hallerig22376.t183.783869.2568echinochloa_crusgalliscaffold70.237.cds66.487954.9598
g22376arabidopsis_hallerig22376.t193.243289.527brassica_oleraceaBo4g157350.193.877590.1361
g22376arabidopsis_hallerig22376.t182.770369.5946oryza_nivaraONIVA11G03640.182.214869.1275
g22376arabidopsis_hallerig22376.t185.810870.9459trifolium_pratenseTp57577_TGAC_v2_mRNA254085.810870.9459
g22376arabidopsis_hallerig22376.t172.635159.4595cynara_cardunculusKVI0960676.785762.8571

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression