RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | g22376 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
2340 bases |
Strand |
Minus strand |
Position |
FJVB01000112.1 : 352390 - 354729 |
RNA binding domain |
RNase_HII |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
g22376 |
RNase_HII |
PF01351 |
1.4e-51 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
g22376.t1 |
1322 |
296aa |
g22376.t1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g22376 | | | | | | | | |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g22376 | arabidopsis_halleri | g22376.t1 | 26.3514 | 16.2162 | chondrus_crispus | CDF40526 | 32.9114 | 20.2532 |
g22376 | arabidopsis_halleri | g22376.t1 | 60.1351 | 39.8649 | chlamydomonas_reinhardtii | PNW69996 | 56.869 | 37.6997 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.1622 | 74.3243 | papaver_somniferum | RZC78392 | 86.2876 | 73.5786 |
g22376 | arabidopsis_halleri | g22376.t1 | 84.4595 | 70.6081 | cannabis_sativa_female | cds.evm.model.02.2008 | 85.034 | 71.0884 |
g22376 | arabidopsis_halleri | g22376.t1 | 68.5811 | 56.4189 | physcomitrium_patens | Pp3c13_7860V3.1 | 71.4789 | 58.8028 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.5 | 75 | ficus_carica | FCD_00022253-RA:cds | 88.3959 | 75.7679 |
g22376 | arabidopsis_halleri | g22376.t1 | 80.4054 | 69.5946 | beta_vulgaris | KMS95104 | 79.8658 | 69.1275 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.473 | 71.2838 | citrullus_lanatus | Cla97C07G142670.1 | 85.1852 | 71.0438 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.8108 | 71.9595 | cucumis_sativus | KGN53090 | 85.5219 | 71.7172 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.473 | 71.9595 | theobroma_cacao | EOY19176 | 84.8993 | 71.4765 |
g22376 | arabidopsis_halleri | g22376.t1 | 98.6487 | 96.9595 | arabidopsis_thaliana | AT2G25100.1 | 98.6487 | 96.9595 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.473 | 70.9459 | cucumis_melo | MELO3C017716.2.1 | 85.1852 | 70.7071 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.8378 | 73.6487 | populus_trichocarpa | Potri.008G019800.1.v4.1 | 87.5421 | 73.4007 |
g22376 | arabidopsis_halleri | g22376.t1 | 93.2432 | 89.527 | brassica_napus | CDY55704 | 93.8775 | 90.1361 |
g22376 | arabidopsis_halleri | g22376.t1 | 93.5811 | 89.527 | brassica_napus | CDY68872 | 94.2177 | 90.1361 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.8108 | 72.973 | malus_domestica_golden | mRNA:MD02G0218500 | 84.9498 | 72.2408 |
g22376 | arabidopsis_halleri | g22376.t1 | 68.9189 | 54.3919 | marchantia_polymorpha | PTQ48012 | 71.3287 | 56.2937 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.1351 | 70.6081 | prunus_dulcis | VVA30916 | 84.8485 | 70.3704 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.473 | 70.6081 | prunus_persica | ONI21489 | 85.1852 | 70.3704 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.7838 | 72.6351 | cajanus_cajan | C.cajan_08090.t | 83.5017 | 72.3906 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.7838 | 71.9595 | glycine_max | KRH36011 | 83.5017 | 71.7172 |
g22376 | arabidopsis_halleri | g22376.t1 | 41.2162 | 35.473 | glycine_max | KRH49554 | 74.8466 | 64.4172 |
g22376 | arabidopsis_halleri | g22376.t1 | 71.9595 | 59.1216 | lupinus_angustifolius | OIV90956 | 75.5319 | 62.0567 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.7838 | 72.6351 | lupinus_angustifolius | OIW06994 | 81.8482 | 70.9571 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.1351 | 69.9324 | medicago_truncatula | KEH44300 | 84.5638 | 69.4631 |
g22376 | arabidopsis_halleri | g22376.t1 | 84.4595 | 71.6216 | phaseolus_vulgaris | ESW14854 | 83.612 | 70.903 |
g22376 | arabidopsis_halleri | g22376.t1 | 69.5946 | 55.4054 | pisum_sativum | Psat0s4121g0080.1.cds | 75.1825 | 59.854 |
g22376 | arabidopsis_halleri | g22376.t1 | 33.7838 | 27.027 | pisum_sativum | Psat4g059000.3.cds | 67.1141 | 53.6913 |
g22376 | arabidopsis_halleri | g22376.t1 | 70.9459 | 59.4595 | vigna_radiata | Vradi08g21720.1 | 80.7692 | 67.6923 |
g22376 | arabidopsis_halleri | g22376.t1 | 84.1216 | 70.6081 | vigna_unguiculata | Vigun07g274500.1.v1.2 | 83.557 | 70.1342 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.1081 | 70.6081 | vigna_angularis | KOM36368 | 82.5503 | 70.1342 |
g22376 | arabidopsis_halleri | g22376.t1 | 76.3513 | 63.8514 | manihot_esculenta | OAY39034 | 80.7143 | 67.5 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.1351 | 71.6216 | capsicum_annuum | PHT65295 | 85.1351 | 71.6216 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.473 | 71.2838 | solanum_tuberosum | PGSC0003DMT400061577 | 85.1852 | 71.0438 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.473 | 71.2838 | solanum_lycopersicum | Solyc11g006860.2.1 | 85.1852 | 71.0438 |
g22376 | arabidopsis_halleri | g22376.t1 | 80.7432 | 68.5811 | helianthus_annuus | mRNA:HanXRQr2_Chr14g0660611 | 80.4714 | 68.3502 |
g22376 | arabidopsis_halleri | g22376.t1 | 79.7297 | 67.5676 | lactuca_sativa | cds-PLY82524.1 | 59 | 50 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.0946 | 68.9189 | lolium_perenne | cds.KYUSt_chr5.13560 | 81 | 68 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.4324 | 68.9189 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.5Ag0001758.2 | 67.033 | 56.044 |
g22376 | arabidopsis_halleri | g22376.t1 | 81.7568 | 69.5946 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.5Cg0001278.3 | 63.8522 | 54.3536 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.0946 | 68.5811 | avena_sativa_sang | AVESA.00010b.r2.5AG0830210.1.CDS | 81 | 67.6667 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 69.5946 | avena_sativa_sang | AVESA.00010b.r2.5CG0905390.1.CDS | 81.6667 | 68.6667 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.4324 | 68.9189 | avena_sativa_sang | AVESA.00010b.r2.5DG0978990.2.CDS | 81.3333 | 68 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.4324 | 70.2703 | oryza_longistaminata | KN538699.1_FGP085 | 81.8792 | 69.7987 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 69.5946 | oryza_rufipogon | ORUFI11G03390.1 | 82.2148 | 69.1275 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.4324 | 70.6081 | oryza_brachyantha | OB11G12800.1 | 64.042 | 54.8556 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 69.9324 | oryza_punctata | OPUNC11G03160.1 | 81.3953 | 68.7708 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 70.2703 | oryza_glaberrima | ORGLA11G0032400.1 | 82.2148 | 69.7987 |
g22376 | arabidopsis_halleri | g22376.t1 | 81.4189 | 67.9054 | secale_cereale | SECCE5Rv1G0316580.1 | 78.7582 | 65.6863 |
g22376 | arabidopsis_halleri | g22376.t1 | 57.4324 | 47.973 | setaria_viridis | TKW07878 | 81.7308 | 68.2692 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.1081 | 69.2568 | setaria_viridis | TKW07503 | 81.7276 | 68.1063 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.7838 | 69.2568 | sorghum_bicolor | EER88865 | 83.5017 | 69.0236 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.4459 | 68.9189 | sorghum_bicolor | EES15689 | 83.165 | 68.6869 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.1081 | 69.2568 | setaria_italica | KQK99953 | 54.0659 | 45.0549 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.1081 | 68.9189 | setaria_italica | KQK99650 | 81.7276 | 67.7741 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.0946 | 67.5676 | zea_mays | Zm00001eb406890_P004 | 81.8182 | 67.3401 |
g22376 | arabidopsis_halleri | g22376.t1 | 24.6622 | 20.6081 | zea_mays | Zm00001eb407010_P001 | 87.9518 | 73.494 |
g22376 | arabidopsis_halleri | g22376.t1 | 75.6757 | 64.527 | ananas_comosus | Aco023038.1.mrna1 | 75.1678 | 64.094 |
g22376 | arabidopsis_halleri | g22376.t1 | 73.9865 | 60.8108 | asparagus_officinalis | ONK57136 | 79.6364 | 65.4545 |
g22376 | arabidopsis_halleri | g22376.t1 | 81.7568 | 67.9054 | triticum_turgidum | TRITD5Av1G096400.1 | 79.3443 | 65.9016 |
g22376 | arabidopsis_halleri | g22376.t1 | 81.4189 | 67.9054 | triticum_turgidum | TRITD5Bv1G078260.1 | 79.0164 | 65.9016 |
g22376 | arabidopsis_halleri | g22376.t1 | 54.3919 | 40.2027 | caenorhabditis_elegans | T13H5.7.1 | 54.2088 | 40.0673 |
g22376 | arabidopsis_halleri | g22376.t1 | 59.1216 | 43.2432 | drosophila_melanogaster | FBpp0077750 | 50.4323 | 36.8876 |
g22376 | arabidopsis_halleri | g22376.t1 | 81.7568 | 69.5946 | amborella_trichopoda | ERN13012 | 80.9365 | 68.8963 |
g22376 | arabidopsis_halleri | g22376.t1 | 86.8243 | 73.3108 | gossypium_raimondii | KJB60406 | 86.532 | 73.064 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.0946 | 67.5676 | brachypodium_distachyon | KQJ92197 | 81.2709 | 66.8896 |
g22376 | arabidopsis_halleri | g22376.t1 | 57.4324 | 41.5541 | homo_sapiens | ENSP00000221486 | 56.8562 | 41.1371 |
g22376 | arabidopsis_halleri | g22376.t1 | 86.8243 | 71.2838 | fraxinus_excelsior | FRAEX38873_v2_000272050.1.cds | 86.532 | 71.0438 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 70.2703 | oryza_glumipatula | OGLUM11G03130.1 | 82.2148 | 69.7987 |
g22376 | arabidopsis_halleri | g22376.t1 | 57.7703 | 48.6486 | eragrostis_curvula | TVU26876 | 78.0822 | 65.7534 |
g22376 | arabidopsis_halleri | g22376.t1 | 68.2432 | 55.4054 | eragrostis_curvula | TVU26875 | 82.1138 | 66.6667 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 69.5946 | oryza_indica | BGIOSGA034821-PA | 82.2148 | 69.1275 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.1622 | 73.9865 | vitis_vinifera | Vitvi13g00975_P002 | 86.8687 | 73.7374 |
g22376 | arabidopsis_halleri | g22376.t1 | 86.8243 | 71.2838 | coffea_canephora | CDO99916 | 86.532 | 71.0438 |
g22376 | arabidopsis_halleri | g22376.t1 | 84.4595 | 71.2838 | ipomoea_triloba | itb12g21590.t1 | 83.8926 | 70.8054 |
g22376 | arabidopsis_halleri | g22376.t1 | 81.7568 | 67.9054 | triticum_urartu | TuG1812G0500001343.01.T01 | 79.3443 | 65.9016 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.0946 | 69.5946 | oryza_meridionalis | OMERI11G03200.1 | 81.5436 | 69.1275 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.473 | 71.6216 | prunus_avium | Pav_sc0000123.1_g650.1.mk:mrna | 85.1852 | 71.3805 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 69.5946 | oryza_sativa | Os11t0153900-01 | 82.2148 | 69.1275 |
g22376 | arabidopsis_halleri | g22376.t1 | 74.6622 | 64.527 | pistacia_vera | cds-EVM0009726.1 | 85.3282 | 73.7452 |
g22376 | arabidopsis_halleri | g22376.t1 | 86.4865 | 72.6351 | quercus_suber | cds-POF08904.1 | 85.6187 | 71.9064 |
g22376 | arabidopsis_halleri | g22376.t1 | 31.0811 | 16.8919 | galdieria_sulphuraria | EME32642 | 30.5648 | 16.6113 |
g22376 | arabidopsis_halleri | g22376.t1 | 57.7703 | 40.8784 | ciona_savignyi | ENSCSAVP00000018565 | 58.5616 | 41.4384 |
g22376 | arabidopsis_halleri | g22376.t1 | 73.3108 | 58.7838 | chenopodium_quinoa | AUR62041514-RA:cds | 53.0562 | 42.5428 |
g22376 | arabidopsis_halleri | g22376.t1 | 78.0405 | 66.8919 | chenopodium_quinoa | AUR62042081-RA:cds | 78.5714 | 67.3469 |
g22376 | arabidopsis_halleri | g22376.t1 | 84.4595 | 71.2838 | dioscorea_rotundata | DRNTG_02289.1 | 83.8926 | 70.8054 |
g22376 | arabidopsis_halleri | g22376.t1 | 80.7432 | 70.6081 | citrus_clementina | ESR58978 | 80.4714 | 70.3704 |
g22376 | arabidopsis_halleri | g22376.t1 | 86.8243 | 73.3108 | juglans_regia | cds.Jr14_04870_p1 | 72.3944 | 61.1268 |
g22376 | arabidopsis_halleri | g22376.t1 | 31.0811 | 18.5811 | ostreococcus_lucimarinus | ABO98967 | 48.6772 | 29.1005 |
g22376 | arabidopsis_halleri | g22376.t1 | 51.3514 | 36.1486 | saccharomyces_cerevisiae | YNL072W | 49.5114 | 34.8534 |
g22376 | arabidopsis_halleri | g22376.t1 | 81.0811 | 69.2568 | leersia_perrieri | LPERR11G02930.1 | 62.8272 | 53.6649 |
g22376 | arabidopsis_halleri | g22376.t1 | 74.3243 | 62.1622 | aegilops_tauschii | AET5Gv20346300.1 | 66.6667 | 55.7576 |
g22376 | arabidopsis_halleri | g22376.t1 | 80.4054 | 67.5676 | musa_acuminata | Ma02_p02890.1 | 80.4054 | 67.5676 |
g22376 | arabidopsis_halleri | g22376.t1 | 61.8243 | 50.3378 | selaginella_moellendorffii | EFJ16486 | 70.1149 | 57.0881 |
g22376 | arabidopsis_halleri | g22376.t1 | 59.1216 | 48.6486 | selaginella_moellendorffii | EFJ32196 | 48.4765 | 39.8892 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.4324 | 67.9054 | panicum_hallii | PUZ63006 | 81.0631 | 66.7774 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.5 | 72.973 | quercus_lobata | QL04p046731:mrna | 86.6221 | 72.2408 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.8378 | 83.7838 | eutrema_salsugineum | ESQ46559 | 94.5455 | 90.1818 |
g22376 | arabidopsis_halleri | g22376.t1 | 67.9054 | 53.7162 | kalanchoe_fedtschenkoi | Kaladp0278s0019.1.v1.1 | 66.7774 | 52.8239 |
g22376 | arabidopsis_halleri | g22376.t1 | 80.7432 | 67.9054 | hordeum_vulgare | HORVU.MOREX.r3.5HG0460390.1 | 78.3607 | 65.9016 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.1351 | 70.9459 | rosa_chinensis | PRQ32756 | 85.4237 | 71.1864 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 70.2703 | oryza_barthii | OBART11G03500.1 | 82.2148 | 69.7987 |
g22376 | arabidopsis_halleri | g22376.t1 | 43.9189 | 35.473 | chara_braunii | GBG79631 | 67.7083 | 54.6875 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.1622 | 75.3378 | corymbia_citriodora | cds-KAF8021812.1 | 87.1622 | 75.3378 |
g22376 | arabidopsis_halleri | g22376.t1 | 93.5811 | 89.1892 | brassica_rapa_ro18 | A04p024960.1_BraROA.1 | 94.2177 | 89.7959 |
g22376 | arabidopsis_halleri | g22376.t1 | 86.1487 | 70.6081 | olea_europaea | OE9A035593C1 | 85.8586 | 70.3704 |
g22376 | arabidopsis_halleri | g22376.t1 | 87.1622 | 74.3243 | eucalyptus_grandis | KCW65195 | 55.6034 | 47.4138 |
g22376 | arabidopsis_halleri | g22376.t1 | 55.0676 | 35.8108 | cyanidioschyzon_merolae | CMK297CT | 49.6951 | 32.3171 |
g22376 | arabidopsis_halleri | g22376.t1 | 98.3108 | 96.2838 | camelina_sativa | Csa09g090300.1 | 98.3108 | 96.2838 |
g22376 | arabidopsis_halleri | g22376.t1 | 98.3108 | 96.9595 | camelina_sativa | Csa07g055140.1 | 98.3108 | 96.9595 |
g22376 | arabidopsis_halleri | g22376.t1 | 93.5811 | 92.5676 | camelina_sativa | Csa16g046730.1 | 96.8531 | 95.8042 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.8108 | 71.6216 | daucus_carota | KZN05517 | 85.5219 | 71.3805 |
g22376 | arabidopsis_halleri | g22376.t1 | 64.527 | 54.3919 | daucus_carota | KZN05526 | 81.2766 | 68.5106 |
g22376 | arabidopsis_halleri | g22376.t1 | 60.1351 | 51.0135 | digitaria_exilis | Dexi3A01G0003390.1:cds | 59.9327 | 50.8418 |
g22376 | arabidopsis_halleri | g22376.t1 | 60.1351 | 48.9865 | digitaria_exilis | Dexi2B01G0016500.1:cds | 52.6627 | 42.8994 |
g22376 | arabidopsis_halleri | g22376.t1 | 62.5 | 51.6892 | digitaria_exilis | Dexi3B01G0003420.1:cds | 67.029 | 55.4348 |
g22376 | arabidopsis_halleri | g22376.t1 | 48.9865 | 40.8784 | digitaria_exilis | Dexi2A01G0017490.1:cds | 79.6703 | 66.4835 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.4324 | 69.2568 | eragrostis_tef | Et_6B_048946.CDS | 81.8792 | 68.7919 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 70.2703 | eragrostis_tef | Et_6A_047219.CDS | 82.2148 | 69.7987 |
g22376 | arabidopsis_halleri | g22376.t1 | 99.3243 | 98.3108 | arabidopsis_lyrata | Al_scaffold_0004_577 | 99.3243 | 98.3108 |
g22376 | arabidopsis_halleri | g22376.t1 | 77.3649 | 63.8514 | saccharum_spontaneum | Sspon.08G0002980-1A-mRNA-1:cds | 73.871 | 60.9677 |
g22376 | arabidopsis_halleri | g22376.t1 | 84.4595 | 73.3108 | nymphaea_colorata | NC13G0196310.1:cds | 84.4595 | 73.3108 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.1081 | 68.9189 | echinochloa_crusgalli | scaffold83.170.cds | 81.1881 | 67.3267 |
g22376 | arabidopsis_halleri | g22376.t1 | 83.7838 | 69.2568 | echinochloa_crusgalli | scaffold70.237.cds | 66.4879 | 54.9598 |
g22376 | arabidopsis_halleri | g22376.t1 | 93.2432 | 89.527 | brassica_oleracea | Bo4g157350.1 | 93.8775 | 90.1361 |
g22376 | arabidopsis_halleri | g22376.t1 | 82.7703 | 69.5946 | oryza_nivara | ONIVA11G03640.1 | 82.2148 | 69.1275 |
g22376 | arabidopsis_halleri | g22376.t1 | 85.8108 | 70.9459 | trifolium_pratense | Tp57577_TGAC_v2_mRNA2540 | 85.8108 | 70.9459 |
g22376 | arabidopsis_halleri | g22376.t1 | 72.6351 | 59.4595 | cynara_cardunculus | KVI09606 | 76.7857 | 62.8571 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |