Description

Ensembl ID g22189 Gene ID Accession -
Symbol Alias - Full Name Ribonuclease II family protein
Status Confidence Length 6795 bases Strand Plus strand
Position FJVB01000110.1 : 249329 - 256123 RNA binding domain PIN_4 , OB_Dis3 , RNB
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g22189 PIN_4 PF13638 9.2e-18 1
g22189 OB_Dis3 PF17849 8e-19 2
g22189 RNB PF00773 2.1e-93 3

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g22189.t1 3085 933aa g22189.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g22189arabidopsis_hallerig01326.t137.947323.6347arabidopsis_hallerig22189.t143.19426.9025
g22189arabidopsis_hallerig19474.t134.495616.9365arabidopsis_hallerig22189.t129.689214.5766

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g22189arabidopsis_hallerig22189.t161.307641.8006chondrus_crispusCDF3352749.352933.6497
g22189arabidopsis_hallerig22189.t152.197240.1929chlamydomonas_reinhardtiiPNW7297362.838748.3871
g22189arabidopsis_hallerig22189.t189.92579.5284papaver_somniferumRZC4576786.673676.6529
g22189arabidopsis_hallerig22189.t190.782481.672cannabis_sativa_femalecds.evm.model.10.85690.782481.672
g22189arabidopsis_hallerig22189.t182.85169.7749physcomitrium_patensPp3c16_17530V3.182.85169.7749
g22189arabidopsis_hallerig22189.t190.353781.8864ficus_caricaFCD_00010484-RA:cds90.064181.6239
g22189arabidopsis_hallerig22189.t189.92582.3151beta_vulgarisKMT0887490.021582.4034
g22189arabidopsis_hallerig22189.t190.675280.2787citrullus_lanatusCla97C02G032690.190.481380.1069
g22189arabidopsis_hallerig22189.t190.353780.1715cucumis_sativusKGN4395190.160480
g22189arabidopsis_hallerig22189.t191.10481.5648theobroma_cacaoEOX9062690.618381.1301
g22189arabidopsis_hallerig22189.t197.856495.9271arabidopsis_thalianaAT2G17510.290.217488.4387
g22189arabidopsis_hallerig22189.t190.675280.6002cucumis_meloMELO3C018432.2.190.481380.4278
g22189arabidopsis_hallerig22189.t189.817879.7428populus_trichocarpaPotri.007G059100.1.v4.189.625779.5722
g22189arabidopsis_hallerig22189.t198.177995.8199brassica_junceacds.BjuA09g61010S98.072895.7173
g22189arabidopsis_hallerig22189.t198.392395.8199brassica_junceacds.BjuB04g32050S98.392395.8199
g22189arabidopsis_hallerig22189.t176.848972.776brassica_junceacds.BjuB03g04070S62.402159.0949
g22189arabidopsis_hallerig22189.t198.070795.7128brassica_napusCDY3036097.965795.6103
g22189arabidopsis_hallerig22189.t198.177995.7128brassica_napusCDY2681391.967989.6586
g22189arabidopsis_hallerig22189.t189.92580.9218malus_domestica_goldenmRNA:MD15G020170089.92580.9218
g22189arabidopsis_hallerig22189.t189.710680.6002malus_domestica_goldenmRNA:MD02G009720089.614680.5139
g22189arabidopsis_hallerig22189.t181.993669.3462marchantia_polymorphaPTQ3432081.38368.8298
g22189arabidopsis_hallerig22189.t189.817880.493prunus_dulcisVVA1007084.817876.0121
g22189arabidopsis_hallerig22189.t189.710680.3858prunus_persicaONH9734889.614680.2998
g22189arabidopsis_hallerig22189.t190.568181.9936cajanus_cajanC.cajan_39049.t90.568181.9936
g22189arabidopsis_hallerig22189.t190.032281.3505glycine_maxKRH5373689.935881.2634
g22189arabidopsis_hallerig22189.t141.264735.0482glycine_maxKRH2715583.87871.2418
g22189arabidopsis_hallerig22189.t190.353781.7792glycine_maxKRH6419990.160481.6043
g22189arabidopsis_hallerig22189.t187.352677.8135lupinus_angustifoliusOIW0208290.858480.9365
g22189arabidopsis_hallerig22189.t190.460980.0643medicago_truncatulaAET0357890.36479.9786
g22189arabidopsis_hallerig22189.t190.460981.9936phaseolus_vulgarisESW0962290.267481.8182
g22189arabidopsis_hallerig22189.t190.353781.4577pisum_sativumPsat4g104600.1.cds90.160481.2834
g22189arabidopsis_hallerig22189.t157.663551.4469pisum_sativumPsat0s2855g0160.1.cds88.196778.6885
g22189arabidopsis_hallerig22189.t169.024762.1651vigna_radiataVradi05g05030.181.725973.6041
g22189arabidopsis_hallerig22189.t190.568182.2079vigna_unguiculataVigun09g132100.1.v1.290.374382.0321
g22189arabidopsis_hallerig22189.t178.242271.597vigna_angularisKOM4066891.478783.7093
g22189arabidopsis_hallerig22189.t188.210178.9925manihot_esculentaOAY6100890.340380.9001
g22189arabidopsis_hallerig22189.t190.032280.6002capsicum_annuumPHT9099189.266779.915
g22189arabidopsis_hallerig22189.t189.174779.8499solanum_lycopersicumSolyc02g082460.3.188.98479.6791
g22189arabidopsis_hallerig22189.t145.55239.2283sesamum_indicumSIN_1006437.t76.714866.065
g22189arabidopsis_hallerig22189.t189.603480.2787helianthus_annuusmRNA:HanXRQr2_Chr14g064422189.603480.2787
g22189arabidopsis_hallerig22189.t190.889680.0643lactuca_sativacds-PLY82747.190.889680.0643
g22189arabidopsis_hallerig22189.t177.063265.9164lolium_perennecds.KYUSt_chr4.5119487.151574.5455
g22189arabidopsis_hallerig22189.t187.352675.7771avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0002504.387.165875.615
g22189arabidopsis_hallerig22189.t185.423473.8478avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0003471.1384.249572.833
g22189arabidopsis_hallerig22189.t187.674276.0986avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0001018.487.486675.9358
g22189arabidopsis_hallerig22189.t181.564870.9539avena_sativa_sangAVESA.00010b.r2.1DG0125380.1.CDS86.281275.0567
g22189arabidopsis_hallerig22189.t168.917560.6645avena_sativa_sangAVESA.00010b.r2.4AG0627160.1.CDS87.245676.7978
g22189arabidopsis_hallerig22189.t187.674276.0986avena_sativa_sangAVESA.00010b.r2.4CG1272770.1.CDS87.486675.9358
g22189arabidopsis_hallerig22189.t183.279772.0257oryza_longistaminataKN538922.1_FGP02279.124268.4318
g22189arabidopsis_hallerig22189.t184.351673.6334oryza_rufipogonORUFI03G02070.187.444476.3333
g22189arabidopsis_hallerig22189.t187.352676.2058oryza_brachyanthaOB03G12270.187.259176.1242
g22189arabidopsis_hallerig22189.t186.066574.8124oryza_punctataOPUNC03G02120.387.855676.3676
g22189arabidopsis_hallerig22189.t187.888576.5273oryza_glaberrimaORGLA03G0021000.187.794476.4454
g22189arabidopsis_hallerig22189.t187.781375.7771secale_cerealeSECCE5Rv1G0367260.187.593675.615
g22189arabidopsis_hallerig22189.t188.424475.9914setaria_viridisTKV9841888.04775.667
g22189arabidopsis_hallerig22189.t188.317375.8842sorghum_bicolorEER9293188.222775.803
g22189arabidopsis_hallerig22189.t188.424476.0986setaria_italicaKQK9276988.04775.7737
g22189arabidopsis_hallerig22189.t187.888575.8842triticum_aestivumTraesCS4B02G322900.387.700575.7219
g22189arabidopsis_hallerig22189.t187.888575.9914triticum_aestivumTraesCS5A02G495000.287.700575.8289
g22189arabidopsis_hallerig22189.t187.781375.8842triticum_aestivumTraesCS4D02G319300.487.593675.7219
g22189arabidopsis_hallerig22189.t188.102975.8842zea_maysZm00001eb002260_P00187.914475.7219
g22189arabidopsis_hallerig22189.t188.638877.8135ananas_comosusAco011861.1.mrna183.535473.3333
g22189arabidopsis_hallerig22189.t19.217587.07396asparagus_officinalisONK6445352.43940.2439
g22189arabidopsis_hallerig22189.t187.995777.2776asparagus_officinalisONK5723087.901577.1949
g22189arabidopsis_hallerig22189.t186.38874.4909triticum_turgidumTRITD4Bv1G183580.387.608775.5435
g22189arabidopsis_hallerig22189.t181.243369.1318triticum_turgidumTRITD5Av1G238620.680.126868.1818
g22189arabidopsis_hallerig22189.t158.520940.0857caenorhabditis_elegansC04G2.6.156.815838.9178
g22189arabidopsis_hallerig22189.t162.70145.7663drosophila_melanogasterFBpp008398959.572343.4827
g22189arabidopsis_hallerig22189.t187.459877.3848amborella_trichopodaERN1714886.90176.8903
g22189arabidopsis_hallerig22189.t192.175883.6013corylus_avellanaCav02g00400.t188.84380.5785
g22189arabidopsis_hallerig22189.t191.532782.6367corylus_avellanaCav02g00310.t181.879273.9214
g22189arabidopsis_hallerig22189.t191.639982.5295gossypium_raimondiiKJB1041090.668181.6543
g22189arabidopsis_hallerig22189.t187.56775.9914brachypodium_distachyonPNT7826982.110571.2563
g22189arabidopsis_hallerig22189.t165.70248.1243homo_sapiensENSP0000036699763.987546.8685
g22189arabidopsis_hallerig22189.t185.316277.2776fraxinus_excelsiorFRAEX38873_v2_000143970.1.cds88.542880.2002
g22189arabidopsis_hallerig22189.t183.494172.2401oryza_glumipatulaOGLUM03G02270.179.327968.6354
g22189arabidopsis_hallerig22189.t187.031174.7053eragrostis_curvulaTVU4852084.232472.3029
g22189arabidopsis_hallerig22189.t186.495275.4555oryza_indicaBGIOSGA011530-PA87.812876.605
g22189arabidopsis_hallerig22189.t190.139381.7792vitis_viniferaVitvi07g01892_P00189.754581.4301
g22189arabidopsis_hallerig22189.t190.032280.1715nicotiana_attenuataOIT2694290.225680.3437
g22189arabidopsis_hallerig22189.t187.888577.492coffea_canephoraCDP0177487.888577.492
g22189arabidopsis_hallerig22189.t136.227232.1543ipomoea_trilobaitb05g22810.t192.602782.1918
g22189arabidopsis_hallerig22189.t154.769648.2315ipomoea_trilobaitb05g22800.t189.335778.6713
g22189arabidopsis_hallerig22189.t186.173675.2412oryza_meridionalisOMERI03G02190.286.825175.8099
g22189arabidopsis_hallerig22189.t190.032280.9218prunus_aviumPav_sc0000113.1_g360.1.mk:mrna89.935880.8351
g22189arabidopsis_hallerig22189.t138.906833.5477oryza_sativaOs03t0129200-0082.571.1364
g22189arabidopsis_hallerig22189.t191.318383.4941pistacia_veracds-EVM0007045.157.684552.742
g22189arabidopsis_hallerig22189.t191.961482.851quercus_subercds-POE64240.150.619545.6047
g22189arabidopsis_hallerig22189.t160.34341.1576galdieria_sulphurariaEME2797855.577537.9072
g22189arabidopsis_hallerig22189.t158.092243.4084ciona_savignyiENSCSAVP0000000086865.776749.1505
g22189arabidopsis_hallerig22189.t184.458776.8489chenopodium_quinoaAUR62016565-RA:cds90.36782.2248
g22189arabidopsis_hallerig22189.t184.565976.5273chenopodium_quinoaAUR62003736-RA:cds89.659181.1364
g22189arabidopsis_hallerig22189.t189.067577.3848dioscorea_rotundataDRNTG_14900.188.782177.1367
g22189arabidopsis_hallerig22189.t191.961482.5295citrus_clementinaESR3849591.961482.5295
g22189arabidopsis_hallerig22189.t190.996881.8864juglans_regiacds.Jr11_00220_p190.899481.7987
g22189arabidopsis_hallerig22189.t173.097564.9518juglans_regiacds.Jr11_00250_p186.768477.0992
g22189arabidopsis_hallerig22189.t165.166147.8028ostreococcus_lucimarinusABO9867963.201746.3617
g22189arabidopsis_hallerig22189.t159.699941.0504saccharomyces_cerevisiaeYOL021C55.644438.2617
g22189arabidopsis_hallerig22189.t183.386974.4909actinidia_chinensisPSS0036990.887881.1916
g22189arabidopsis_hallerig22189.t185.316276.0986actinidia_chinensisPSS2997690.76480.9578
g22189arabidopsis_hallerig22189.t183.922873.2047leersia_perrieriLPERR03G02140.184.648773.8378
g22189arabidopsis_hallerig22189.t187.995776.0986aegilops_tauschiiAET4Gv20763500.387.620175.7737
g22189arabidopsis_hallerig22189.t188.102976.2058musa_acuminataMa04_p31990.188.008676.1242
g22189arabidopsis_hallerig22189.t183.065468.5959selaginella_moellendorffiiEFJ0984682.446868.0851
g22189arabidopsis_hallerig22189.t183.065468.7031selaginella_moellendorffiiEFJ1521982.534668.2641
g22189arabidopsis_hallerig22189.t188.424476.313panicum_halliiPUZ4302981.360970.217
g22189arabidopsis_hallerig22189.t197.856495.3912arabis_alpinaKFK4012797.856495.3912
g22189arabidopsis_hallerig22189.t191.854282.7438quercus_lobataQL06p053209:mrna91.755982.6552
g22189arabidopsis_hallerig22189.t198.606696.6774eutrema_salsugineumESQ5075298.606696.6774
g22189arabidopsis_hallerig22189.t191.211181.1361kalanchoe_fedtschenkoiKaladp0057s0059.1.v1.191.01680.9626
g22189arabidopsis_hallerig22189.t188.102975.8842hordeum_vulgareHORVU.MOREX.r3.4HG0410560.187.914475.7219
g22189arabidopsis_hallerig22189.t190.568178.135rosa_chinensisPRQ4718490.277877.8846
g22189arabidopsis_hallerig22189.t184.458773.6334oryza_barthiiOBART03G02330.187.555676.3333
g22189arabidopsis_hallerig22189.t110.93256.53805chara_brauniiGBG6106535.172421.0345
g22189arabidopsis_hallerig22189.t189.92581.3505corymbia_citriodoracds-KAF7849656.190.021581.4378
g22189arabidopsis_hallerig22189.t198.070795.7128brassica_rapa_ro18A09p012560.1_BraROA.197.965795.6103
g22189arabidopsis_hallerig22189.t127.545624.1158olea_europaeaOE9A083528C285.666775
g22189arabidopsis_hallerig22189.t189.817881.1361olea_europaeaOE9A027581C289.721681.0492
g22189arabidopsis_hallerig22189.t189.710681.9936eucalyptus_grandisKCW5047389.806982.0815
g22189arabidopsis_hallerig22189.t157.449139.5498cyanidioschyzon_merolaeCMA140CT51.14535.2099
g22189arabidopsis_hallerig22189.t198.606697.2133camelina_sativaCsa15g075750.198.501197.1092
g22189arabidopsis_hallerig22189.t194.319492.8189camelina_sativaCsa19g054350.185.106483.7524
g22189arabidopsis_hallerig22189.t198.606697.3205camelina_sativaCsa01g032270.196.436195.1782
g22189arabidopsis_hallerig22189.t190.032280.8146daucus_carotaKZM9583889.839680.6417
g22189arabidopsis_hallerig22189.t147.159740.9432digitaria_exilisDexi9A01G0048250.1:cds89.61377.8004
g22189arabidopsis_hallerig22189.t182.958270.6324digitaria_exilisDexi9B01G0047650.1:cds78.658566.9715
g22189arabidopsis_hallerig22189.t131.296926.045digitaria_exilisDexi9A01G0048240.1:cds45.271337.6744
g22189arabidopsis_hallerig22189.t184.673172.5616eragrostis_tefEt_4A_032876.CDS87.875475.3059
g22189arabidopsis_hallerig22189.t187.031174.4909eragrostis_tefEt_4B_036970.CDS88.16575.4615
g22189arabidopsis_hallerig22189.t187.995776.0986triticum_dicoccoidesTRIDC5AG070430.987.062675.2916
g22189arabidopsis_hallerig22189.t187.888575.8842triticum_dicoccoidesTRIDC4BG054320.387.700575.7219
g22189arabidopsis_hallerig22189.t199.678599.1425arabidopsis_lyratafgenesh2_kg.3__3337__AT2G17510.199.678599.1425
g22189arabidopsis_hallerig22189.t167.202656.806saccharum_spontaneumSspon.01G0057330-1D-mRNA-1:cds85.538972.3056
g22189arabidopsis_hallerig22189.t120.042917.7921saccharum_spontaneumSspon.01G0001780-3C-mRNA-1:cds88.625678.673
g22189arabidopsis_hallerig22189.t185.959375.5627nymphaea_colorataNC9G0173340.1:cds82.936972.9059
g22189arabidopsis_hallerig22189.t188.424475.9914echinochloa_crusgalliscaffold293.18.cds88.235375.8289
g22189arabidopsis_hallerig22189.t188.531675.9914echinochloa_crusgalliscaffold104.80.cds88.342275.8289
g22189arabidopsis_hallerig22189.t188.424476.0986echinochloa_crusgalliscaffold52.194.cds88.235375.9358
g22189arabidopsis_hallerig22189.t198.285195.7128brassica_oleraceaBo9g024560.192.439590.0202
g22189arabidopsis_hallerig22189.t191.425581.4577corchorus_capsularisOMO5568091.229981.2834
g22189arabidopsis_hallerig22189.t184.887574.0622oryza_nivaraONIVA03G01940.187.513876.3536
g22189arabidopsis_hallerig22189.t190.353780.6002trifolium_pratenseTp57577_TGAC_v2_mRNA1418190.160480.4278
g22189arabidopsis_hallerig22189.t160.771753.8049cynara_cardunculusKVI0871188.180478.0715

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression