Description

Ensembl ID g20806 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 2124 bases Strand Minus strand
Position FJVB01000093.1 : 64448 - 66571 RNA binding domain Pept_tRNA_hydro
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g20806 Pept_tRNA_hydro PF01195 8.3e-54 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g20806.t1 972 241aa g20806.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g20806arabidopsis_hallerig12153.t166.972554.1284arabidopsis_hallerig20806.t160.580948.9627
g20806arabidopsis_hallerig14010.t152.38137.415arabidopsis_hallerig20806.t163.900445.6432

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g20806arabidopsis_hallerig20806.t153.52732.3651chlamydomonas_reinhardtiiPNW8619347.252728.5714
g20806arabidopsis_hallerig20806.t177.593462.6556papaver_somniferumRZC5808571.102757.4144
g20806arabidopsis_hallerig20806.t178.423267.6349cannabis_sativa_femalecds.evm.model.07.774.5.5bd9b13c75.665.2
g20806arabidopsis_hallerig20806.t159.336143.9834physcomitrium_patensPp3c13_17350V3.149.310336.5517
g20806arabidopsis_hallerig20806.t161.825743.9834physcomitrium_patensPp3c4_11200V3.155.185239.2593
g20806arabidopsis_hallerig20806.t170.539457.6763ficus_caricaFCD_00030448-RA:cds72.649659.4017
g20806arabidopsis_hallerig20806.t179.253165.5602ficus_caricaFCD_00017591-RA:cds76.706863.4538
g20806arabidopsis_hallerig20806.t179.253165.5602ficus_caricaFCD_00032240-RA:cds76.706863.4538
g20806arabidopsis_hallerig20806.t178.838265.9751beta_vulgarisKMT1856777.55164.898
g20806arabidopsis_hallerig20806.t177.593468.0498citrullus_lanatusCla97C05G094130.175.403266.129
g20806arabidopsis_hallerig20806.t177.178468.0498cucumis_sativusKGN5770674.698865.8635
g20806arabidopsis_hallerig20806.t180.912967.6349theobroma_cacaoEOY0416279.91866.8033
g20806arabidopsis_hallerig20806.t196.680594.6058arabidopsis_thalianaAT5G38290.293.291.2
g20806arabidopsis_hallerig20806.t178.008368.4647cucumis_meloMELO3C023748.2.175.266
g20806arabidopsis_hallerig20806.t181.742767.6349populus_trichocarpaPotri.004G098100.5.v4.180.737766.8033
g20806arabidopsis_hallerig20806.t192.116285.0622brassica_junceacds.BjuA07g16670S89.516182.6613
g20806arabidopsis_hallerig20806.t191.286384.2324brassica_junceacds.BjuB06g07150S83.333376.8939
g20806arabidopsis_hallerig20806.t190.871484.2324brassica_napusCDY5360789.024482.5203
g20806arabidopsis_hallerig20806.t191.701284.6473brassica_napusCDX6740089.112982.2581
g20806arabidopsis_hallerig20806.t181.742768.4647malus_domestica_goldenmRNA:MD17G020920063.14152.8846
g20806arabidopsis_hallerig20806.t162.655646.888marchantia_polymorphaPTQ4969654.316540.6475
g20806arabidopsis_hallerig20806.t180.08366.805prunus_dulcisVVA3665978.137665.1822
g20806arabidopsis_hallerig20806.t180.08366.805prunus_persicaONI1718678.137665.1822
g20806arabidopsis_hallerig20806.t178.838264.3154cajanus_cajanC.cajan_14461.t76.923162.753
g20806arabidopsis_hallerig20806.t132.780126.556glycine_maxKRH390217964
g20806arabidopsis_hallerig20806.t176.763563.4855glycine_maxKRH0173575.819762.7049
g20806arabidopsis_hallerig20806.t166.3951.0373glycine_maxKRH4694371.111154.6667
g20806arabidopsis_hallerig20806.t177.178463.4855lupinus_angustifoliusOIW1756075.303661.9433
g20806arabidopsis_hallerig20806.t178.423263.0705medicago_truncatulaAET0491177.777862.5514
g20806arabidopsis_hallerig20806.t178.838263.0705medicago_truncatulaAES8056575.697260.5578
g20806arabidopsis_hallerig20806.t178.838265.1452phaseolus_vulgarisESW1116476.923163.5628
g20806arabidopsis_hallerig20806.t178.838262.6556pisum_sativumPsat3g098200.1.cds76.612960.8871
g20806arabidopsis_hallerig20806.t170.954458.0913vigna_radiataVradi04g11130.142.537334.8259
g20806arabidopsis_hallerig20806.t179.253165.5602vigna_unguiculataVigun05g007500.1.v1.277.327963.9676
g20806arabidopsis_hallerig20806.t178.838264.3154vigna_angularisKOM2851375.396861.5079
g20806arabidopsis_hallerig20806.t178.838265.9751manihot_esculentaOAY6042677.868965.1639
g20806arabidopsis_hallerig20806.t179.668166.805manihot_esculentaOAY5709178.688565.9836
g20806arabidopsis_hallerig20806.t178.008364.3154capsicum_annuumPHT9136477.049263.5246
g20806arabidopsis_hallerig20806.t178.838264.3154solanum_tuberosumPGSC0003DMT40006785478.189363.786
g20806arabidopsis_hallerig20806.t178.838264.3154solanum_lycopersicumSolyc02g086150.3.177.868963.5246
g20806arabidopsis_hallerig20806.t180.08368.0498sesamum_indicumSIN_1004654.t77.5165.8635
g20806arabidopsis_hallerig20806.t176.763565.1452helianthus_annuusmRNA:HanXRQr2_Chr09g039450176.131764.6091
g20806arabidopsis_hallerig20806.t178.423267.2199lactuca_sativacds-PLY81248.177.142966.1225
g20806arabidopsis_hallerig20806.t177.178460.9958lolium_perennecds.KYUSt_chr3.473541.425432.7394
g20806arabidopsis_hallerig20806.t176.763562.2407avena_sativa_ot3098cds.AVESA.00001b.r3.1Cg0000458.168.014755.1471
g20806arabidopsis_hallerig20806.t176.763562.2407avena_sativa_ot3098cds.AVESA.00001b.r3.3Ag0000170.166.78754.1516
g20806arabidopsis_hallerig20806.t176.348561.4108avena_sativa_ot3098cds.AVESA.00001b.r3.3Cg0000118.166.42653.4296
g20806arabidopsis_hallerig20806.t177.178462.2407avena_sativa_sangAVESA.00010b.r2.3AG0407190.1.CDS71.814757.9151
g20806arabidopsis_hallerig20806.t175.933660.9958avena_sativa_sangAVESA.00010b.r2.3CG0454730.1.CDS72.047257.874
g20806arabidopsis_hallerig20806.t177.178462.6556avena_sativa_sangAVESA.00010b.r2.1CG0109970.1.CDS71.538558.0769
g20806arabidopsis_hallerig20806.t138.589227.3859oryza_rufipogonORUFI01G02250.162.837844.5946
g20806arabidopsis_hallerig20806.t160.995848.9627oryza_brachyanthaOB01G12060.185.465168.6047
g20806arabidopsis_hallerig20806.t176.763562.6556oryza_punctataOPUNC01G01860.171.705458.5271
g20806arabidopsis_hallerig20806.t175.933661.4108oryza_glaberrimaORGLA01G0018300.170.656457.1429
g20806arabidopsis_hallerig20806.t160.16649.7925secale_cerealeSECCE3Rv1G0148790.184.302369.7674
g20806arabidopsis_hallerig20806.t177.593463.9004setaria_viridisTKW1325973.046960.1562
g20806arabidopsis_hallerig20806.t177.178463.4855sorghum_bicolorEES0254572.656259.7656
g20806arabidopsis_hallerig20806.t177.593463.9004setaria_italicaKQL0425773.046960.1562
g20806arabidopsis_hallerig20806.t160.16649.3776triticum_aestivumTraesCS3A02G036100.184.302369.186
g20806arabidopsis_hallerig20806.t176.763562.6556triticum_aestivumTraesCS3D02G043900.172.265658.9844
g20806arabidopsis_hallerig20806.t176.348562.2407triticum_aestivumTraesCS3B02G047900.171.87558.5938
g20806arabidopsis_hallerig20806.t175.933663.0705zea_maysZm00001eb335300_P00171.484459.375
g20806arabidopsis_hallerig20806.t175.933662.2407ananas_comosusAco025563.1.mrna172.047259.0551
g20806arabidopsis_hallerig20806.t162.655649.7925asparagus_officinalisONK6638687.790769.7674
g20806arabidopsis_hallerig20806.t160.16649.3776triticum_turgidumTRITD3Av1G008310.284.302369.186
g20806arabidopsis_hallerig20806.t176.348562.2407triticum_turgidumTRITD3Bv1G012330.271.87558.5938
g20806arabidopsis_hallerig20806.t150.207539.0042amborella_trichopodaERN0401272.455156.2874
g20806arabidopsis_hallerig20806.t178.838264.3154amborella_trichopodaERN1965679.166764.5833
g20806arabidopsis_hallerig20806.t181.327867.2199corylus_avellanaCav05g17430.t178.087664.5418
g20806arabidopsis_hallerig20806.t179.668167.2199gossypium_raimondiiKJB1045573.282461.8321
g20806arabidopsis_hallerig20806.t177.178462.6556brachypodium_distachyonKQK0254873.809559.9206
g20806arabidopsis_hallerig20806.t143.568520.7469homo_sapiensENSP0000043946949.065423.3645
g20806arabidopsis_hallerig20806.t180.08367.2199fraxinus_excelsiorFRAEX38873_v2_000141750.1.cds77.822665.3226
g20806arabidopsis_hallerig20806.t179.668166.805fraxinus_excelsiorFRAEX38873_v2_000162290.1.cds77.419464.9194
g20806arabidopsis_hallerig20806.t170.124556.4315oryza_glumipatulaOGLUM01G02310.263.533851.1278
g20806arabidopsis_hallerig20806.t178.008364.7303eragrostis_curvulaTVU2206675.50262.6506
g20806arabidopsis_hallerig20806.t175.933660.9958oryza_indicaBGIOSGA002450-PA70.656456.7568
g20806arabidopsis_hallerig20806.t178.838267.2199vitis_viniferaVitvi14g01160_P00177.235865.8537
g20806arabidopsis_hallerig20806.t180.912968.0498coffea_canephoraCDP0276779.591866.9388
g20806arabidopsis_hallerig20806.t176.348561.8257ipomoea_trilobaitb04g22600.t144.660236.165
g20806arabidopsis_hallerig20806.t166.3952.6971ipomoea_trilobaitb04g20930.t134.707227.5488
g20806arabidopsis_hallerig20806.t160.16649.3776triticum_urartuTuG1812S0001757700.01.T0184.302369.186
g20806arabidopsis_hallerig20806.t176.348561.8257oryza_meridionalisOMERI01G01610.171.595357.9767
g20806arabidopsis_hallerig20806.t179.253165.5602prunus_aviumPav_sc0001488.1_g080.1.mk:mrna76.463.2
g20806arabidopsis_hallerig20806.t175.933661.4108oryza_sativaOs01t0132800-0170.656457.1429
g20806arabidopsis_hallerig20806.t181.742768.4647pistacia_veracds-EVM0019484.280.737767.6229
g20806arabidopsis_hallerig20806.t181.742768.4647pistacia_veracds-EVM0017005.179.757166.8016
g20806arabidopsis_hallerig20806.t181.742766.805quercus_subercds-POE58209.168.166155.7093
g20806arabidopsis_hallerig20806.t140.663927.8008galdieria_sulphurariaEME2814046.445531.7536
g20806arabidopsis_hallerig20806.t179.668166.39chenopodium_quinoaAUR62023289-RA:cds78.367365.3061
g20806arabidopsis_hallerig20806.t179.253165.9751chenopodium_quinoaAUR62009012-RA:cds77.959264.898
g20806arabidopsis_hallerig20806.t179.253165.9751chenopodium_quinoaAUR62043982-RA:cds77.959264.898
g20806arabidopsis_hallerig20806.t161.825751.0373dioscorea_rotundataDRNTG_29172.186.627971.5116
g20806arabidopsis_hallerig20806.t182.157769.7095citrus_clementinaESR4399081.147568.8525
g20806arabidopsis_hallerig20806.t182.987568.0498juglans_regiacds.Jr10_05370_p178.740264.5669
g20806arabidopsis_hallerig20806.t182.987568.0498juglans_regiacds.Jr10_05360_p180.971766.3968
g20806arabidopsis_hallerig20806.t148.547728.2158ostreococcus_lucimarinusABO9415261.904835.9788
g20806arabidopsis_hallerig20806.t136.099621.9917saccharomyces_cerevisiaeYHR189W45.789527.8947
g20806arabidopsis_hallerig20806.t180.912965.5602actinidia_chinensisPSS3059080.246965.0206
g20806arabidopsis_hallerig20806.t176.763562.6556leersia_perrieriLPERR01G01990.171.705458.5271
g20806arabidopsis_hallerig20806.t161.825748.5477aegilops_tauschiiAET3Gv20085700.356.439444.3182
g20806arabidopsis_hallerig20806.t177.178464.7303musa_acuminataMa05_p26060.171.538560
g20806arabidopsis_hallerig20806.t152.282237.7593selaginella_moellendorffiiEFJ3388271.186451.4124
g20806arabidopsis_hallerig20806.t152.282237.7593selaginella_moellendorffiiEFJ3740071.186451.4124
g20806arabidopsis_hallerig20806.t177.178463.0705panicum_halliiPUZ5789372.656259.375
g20806arabidopsis_hallerig20806.t181.742766.805quercus_lobataQL02p051027:mrna68.166155.7093
g20806arabidopsis_hallerig20806.t181.742766.805quercus_lobataQL12p016545:mrna66.779754.5763
g20806arabidopsis_hallerig20806.t195.435788.3817eutrema_salsugineumESQ472329285.2
g20806arabidopsis_hallerig20806.t173.44460.5809kalanchoe_fedtschenkoiKaladp0045s0351.1.v1.172.54159.8361
g20806arabidopsis_hallerig20806.t176.763562.2407hordeum_vulgareHORVU.MOREX.r3.3HG0225640.171.705458.1395
g20806arabidopsis_hallerig20806.t149.792541.9087rosa_chinensisPRQ4921373.619661.9632
g20806arabidopsis_hallerig20806.t180.08365.9751rosa_chinensisPRQ1996172.830260
g20806arabidopsis_hallerig20806.t169.709556.0166oryza_barthiiOBART01G02170.163.157950.7519
g20806arabidopsis_hallerig20806.t160.16641.9087chara_brauniiGBG6990531.182821.7204
g20806arabidopsis_hallerig20806.t161.825743.1535chara_brauniiGBG7985914.855410.3689
g20806arabidopsis_hallerig20806.t177.178465.5602corymbia_citriodoracds-KAF8010201.175.303663.9676
g20806arabidopsis_hallerig20806.t192.116285.0622brassica_rapa_ro18A07p025570.1_BraROA.189.516182.6613
g20806arabidopsis_hallerig20806.t179.253167.6349olea_europaeaOE9A015754C177.016165.7258
g20806arabidopsis_hallerig20806.t175.518765.5602eucalyptus_grandisKCW5207168.939459.8485
g20806arabidopsis_hallerig20806.t143.153527.3859cyanidioschyzon_merolaeCMQ022CT38.235324.2647
g20806arabidopsis_hallerig20806.t195.435791.2863camelina_sativaCsa12g085480.19288
g20806arabidopsis_hallerig20806.t189.211682.9875camelina_sativaCsa10g043310.182.692376.9231
g20806arabidopsis_hallerig20806.t194.605890.0415camelina_sativaCsa11g052110.191.935587.5
g20806arabidopsis_hallerig20806.t176.348563.0705daucus_carotaKZM9673273.660.8
g20806arabidopsis_hallerig20806.t178.008363.4855digitaria_exilisDexi5B01G0008340.1:cds73.151759.5331
g20806arabidopsis_hallerig20806.t177.178463.4855digitaria_exilisDexi5A01G0007830.1:cds72.373559.5331
g20806arabidopsis_hallerig20806.t178.423264.7303eragrostis_tefEt_3A_026224.CDS7561.9048
g20806arabidopsis_hallerig20806.t177.593464.3154eragrostis_tefEt_3B_030610.CDS68.248256.5693
g20806arabidopsis_hallerig20806.t175.933662.2407triticum_dicoccoidesTRIDC3BG006390.271.484458.5938
g20806arabidopsis_hallerig20806.t176.763563.0705triticum_dicoccoidesTRIDC3AG003910.270.881258.2375
g20806arabidopsis_hallerig20806.t197.510495.0207arabidopsis_lyrataAl_scaffold_0007_392797.510495.0207
g20806arabidopsis_hallerig20806.t134.024926.556saccharum_spontaneumSspon.03G0019630-2C-mRNA-1:cds62.595448.855
g20806arabidopsis_hallerig20806.t169.294656.4315saccharum_spontaneumSspon.03G0019630-1P-mRNA-1:cds54.575244.4444
g20806arabidopsis_hallerig20806.t153.941944.8133saccharum_spontaneumSspon.03G0019630-3D-mRNA-1:cds83.87169.6774
g20806arabidopsis_hallerig20806.t170.124557.2614saccharum_spontaneumSspon.03G0019630-1A-mRNA-1:cds69.834757.0248
g20806arabidopsis_hallerig20806.t153.11241.4938saccharum_spontaneumSspon.03G0042830-1C-mRNA-138.323429.9401
g20806arabidopsis_hallerig20806.t166.80555.1867nymphaea_colorataNC7G0279030.1:cds60.984850.3788
g20806arabidopsis_hallerig20806.t177.593463.4855echinochloa_crusgalliscaffold59.319.cds73.046959.7656
g20806arabidopsis_hallerig20806.t177.178463.4855echinochloa_crusgalliscaffold185.190.cds72.373559.5331
g20806arabidopsis_hallerig20806.t177.178463.0705echinochloa_crusgalliscaffold88.65.cds72.656259.375
g20806arabidopsis_hallerig20806.t190.871484.2324brassica_oleraceaBo6g059910.183.2777.1863
g20806arabidopsis_hallerig20806.t180.912967.6349corchorus_capsularisOMO8021379.91866.8033
g20806arabidopsis_hallerig20806.t170.124556.4315oryza_nivaraONIVA01G02320.263.533851.1278
g20806arabidopsis_hallerig20806.t179.253164.3154trifolium_pratenseTp57577_TGAC_v2_mRNA3259777.016162.5
g20806arabidopsis_hallerig20806.t178.008366.39cynara_cardunculusKVI0014262.458553.1561

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression