Description

Ensembl ID g19183 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 1818 bases Strand Minus strand
Position FJVB01000076.1 : 533027 - 534844 RNA binding domain RLI
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g19183 RLI PF04068 1.6e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g19183.t1 946 266aa g19183.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g19183

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g19183arabidopsis_hallerig19183.t15036.0902chondrus_crispusCDF3421249.442435.6877
g19183arabidopsis_hallerig19183.t160.902343.985chlamydomonas_reinhardtiiPNW6993940.529.25
g19183arabidopsis_hallerig19183.t177.067764.2857papaver_somniferumRZC4387274.817562.4088
g19183arabidopsis_hallerig19183.t178.947466.1654cannabis_sativa_femalecds.evm.model.04.742.1.5bd9b13778.066965.4275
g19183arabidopsis_hallerig19183.t163.157949.2481physcomitrium_patensPAC:32906797.CDS.154.545542.5325
g19183arabidopsis_hallerig19183.t149.624142.8571ficus_caricaFCD_00026855-RA:cds75.862165.5172
g19183arabidopsis_hallerig19183.t181.578969.9248beta_vulgarisKMT0007978.623267.3913
g19183arabidopsis_hallerig19183.t161.654149.6241citrullus_lanatusCla97C09G176690.153.947443.4211
g19183arabidopsis_hallerig19183.t179.699265.0376cucumis_sativusKGN5323254.922344.8187
g19183arabidopsis_hallerig19183.t183.458669.1729theobroma_cacaoEOX9220985.057570.4981
g19183arabidopsis_hallerig19183.t193.98592.4812arabidopsis_thalianaAT5G10070.293.98592.4812
g19183arabidopsis_hallerig19183.t178.195564.2857cucumis_meloMELO3C017578.2.166.666754.8077
g19183arabidopsis_hallerig19183.t183.082769.5489populus_trichocarpaPotri.005G080300.1.v4.183.712170.0758
g19183arabidopsis_hallerig19183.t189.097784.9624brassica_junceacds.BjuA10g24010S53.863651.3636
g19183arabidopsis_hallerig19183.t137.969932.3308brassica_junceacds.BjuB02g42340S30.421725.9036
g19183arabidopsis_hallerig19183.t192.105387.9699brassica_junceacds.BjuB02g42360S85.069481.25
g19183arabidopsis_hallerig19183.t190.977486.4662brassica_napusCDY2162881.756877.7027
g19183arabidopsis_hallerig19183.t190.977485.3383brassica_napusCDX6986381.481576.431
g19183arabidopsis_hallerig19183.t177.067765.4135malus_domestica_goldenmRNA:MD15G028570075.367663.9706
g19183arabidopsis_hallerig19183.t160.526351.5038malus_domestica_goldenmRNA:MD01G001350051.602643.9103
g19183arabidopsis_hallerig19183.t164.285751.5038marchantia_polymorphaPTQ2829248.16938.5915
g19183arabidopsis_hallerig19183.t176.315863.9098prunus_dulcisVVA2882076.893964.3939
g19183arabidopsis_hallerig19183.t176.315864.2857prunus_persicaONI0212876.893964.7727
g19183arabidopsis_hallerig19183.t163.157950.3759cajanus_cajanC.cajan_32095.t83.168366.3366
g19183arabidopsis_hallerig19183.t175.563960.9023glycine_maxKRH4324874.169759.7786
g19183arabidopsis_hallerig19183.t175.18861.2782glycine_maxKRH5940673.800760.1476
g19183arabidopsis_hallerig19183.t149.248139.4737lupinus_angustifoliusOIW1820882.389966.0377
g19183arabidopsis_hallerig19183.t175.18863.1579medicago_truncatulaAET0455673.260161.5385
g19183arabidopsis_hallerig19183.t175.563959.7744phaseolus_vulgarisESW3172874.721259.1078
g19183arabidopsis_hallerig19183.t161.654147.7444pisum_sativumPsat7g089320.1.cds63.813249.4163
g19183arabidopsis_hallerig19183.t176.691759.7744pisum_sativumPsat7g053400.1.cds69.387854.0816
g19183arabidopsis_hallerig19183.t169.548951.8797vigna_radiataVradi01g10430.175.819756.5574
g19183arabidopsis_hallerig19183.t177.819562.406vigna_unguiculataVigun03g072700.1.v1.276.666761.4815
g19183arabidopsis_hallerig19183.t178.571462.406vigna_angularisKOM3067571.575356.8493
g19183arabidopsis_hallerig19183.t181.20369.1729manihot_esculentaOAY3321778.545566.9091
g19183arabidopsis_hallerig19183.t172.180561.2782capsicum_annuumPHT8248271.641860.8209
g19183arabidopsis_hallerig19183.t173.684262.406solanum_tuberosumPGSC0003DMT40006010773.134361.9403
g19183arabidopsis_hallerig19183.t159.398550.3759solanum_lycopersicumSolyc05g055380.2.169.298258.7719
g19183arabidopsis_hallerig19183.t171.052661.2782sesamum_indicumSIN_1014961.t71.863161.9772
g19183arabidopsis_hallerig19183.t177.819566.9173helianthus_annuusmRNA:HanXRQr2_Chr14g064790176.951766.171
g19183arabidopsis_hallerig19183.t178.195566.9173lactuca_sativacds-PLY89807.178.787967.4242
g19183arabidopsis_hallerig19183.t166.917358.6466lolium_perennecds.KYUSt_chr4.5008877.391367.8261
g19183arabidopsis_hallerig19183.t174.81262.782avena_sativa_sangAVESA.00010b.r2.5AG0795070.1.CDS71.582760.0719
g19183arabidopsis_hallerig19183.t164.661756.391avena_sativa_sangAVESA.00010b.r2.4CG1290430.1.CDS78.899168.8073
g19183arabidopsis_hallerig19183.t175.939863.9098avena_sativa_sangAVESA.00010b.r2.1DG0132300.1.CDS72.924261.3718
g19183arabidopsis_hallerig19183.t174.436163.1579avena_sativa_sangAVESA.00010b.r2.4CG1280220.1.CDS71.480160.6498
g19183arabidopsis_hallerig19183.t173.684261.2782oryza_brachyanthaOB03G17120.172.592660.3704
g19183arabidopsis_hallerig19183.t173.684261.2782oryza_punctataOPUNC03G06670.171.794959.707
g19183arabidopsis_hallerig19183.t174.060261.6541oryza_glaberrimaORGLA03G0067100.172.426560.2941
g19183arabidopsis_hallerig19183.t165.037657.1429secale_cerealeSECCE7Rv1G0470090.175.877266.6667
g19183arabidopsis_hallerig19183.t175.563962.782setaria_viridisTKV9768161.467951.0703
g19183arabidopsis_hallerig19183.t177.819564.2857sorghum_bicolorEER9270375.547462.4088
g19183arabidopsis_hallerig19183.t175.563962.406setaria_italicaKQK9214761.656450.9202
g19183arabidopsis_hallerig19183.t174.436163.5338triticum_aestivumTraesCS4D02G264400.169.718359.507
g19183arabidopsis_hallerig19183.t174.060263.1579triticum_aestivumTraesCS4B02G264400.169.122858.9474
g19183arabidopsis_hallerig19183.t174.060262.782triticum_aestivumTraesCS4A02G043700.169.366258.8028
g19183arabidopsis_hallerig19183.t177.443663.9098zea_maysZm00001eb401110_P00375.735362.5
g19183arabidopsis_hallerig19183.t169.172957.5188ananas_comosusAco004099.1.mrna170.498158.6207
g19183arabidopsis_hallerig19183.t167.669255.6391asparagus_officinalisONK7551771.428658.7302
g19183arabidopsis_hallerig19183.t174.060262.782triticum_turgidumTRITD4Av1G015930.169.366258.8028
g19183arabidopsis_hallerig19183.t174.060263.1579triticum_turgidumTRITD4Bv1G157710.169.122858.9474
g19183arabidopsis_hallerig19183.t151.127833.8346caenorhabditis_elegansF52C12.2.152.107334.4828
g19183arabidopsis_hallerig19183.t155.639140.2256drosophila_melanogasterFBpp008252554.014639.0511
g19183arabidopsis_hallerig19183.t171.804559.7744amborella_trichopodaERM9424768.214356.7857
g19183arabidopsis_hallerig19183.t175.18860.5263corylus_avellanaCav11g04570.t153.619343.1635
g19183arabidopsis_hallerig19183.t178.195567.6692gossypium_raimondiiKJB1829683.272
g19183arabidopsis_hallerig19183.t175.18863.1579brachypodium_distachyonKQK2315073.800761.9926
g19183arabidopsis_hallerig19183.t154.135338.7218homo_sapiensENSP0000000739046.153833.0128
g19183arabidopsis_hallerig19183.t162.78250.3759fraxinus_excelsiorFRAEX38873_v2_000379140.1.cds73.893859.292
g19183arabidopsis_hallerig19183.t175.563962.782eragrostis_curvulaTVU4808766.336655.1155
g19183arabidopsis_hallerig19183.t174.060261.6541oryza_indicaBGIOSGA011288-PA72.426560.2941
g19183arabidopsis_hallerig19183.t178.947467.6692vitis_viniferaVitvi07g01798_P00171.672461.4334
g19183arabidopsis_hallerig19183.t170.676760.9023nicotiana_attenuataOIT2202070.676760.9023
g19183arabidopsis_hallerig19183.t177.819563.1579coffea_canephoraCDP2079870.169556.9492
g19183arabidopsis_hallerig19183.t172.932361.2782ipomoea_trilobaitb03g10750.t172.932361.2782
g19183arabidopsis_hallerig19183.t174.060262.782triticum_urartuTuG1812G0400003025.01.T0169.366258.8028
g19183arabidopsis_hallerig19183.t166.541457.1429prunus_aviumPav_sc0002914.1_g010.1.mk:mrna83.098671.3615
g19183arabidopsis_hallerig19183.t174.060261.6541oryza_sativaOs03t0195200-0172.426560.2941
g19183arabidopsis_hallerig19183.t182.330868.0451pistacia_veracds-EVM0010207.176.041762.8472
g19183arabidopsis_hallerig19183.t181.954969.1729quercus_subercds-POF10915.173.898362.3729
g19183arabidopsis_hallerig19183.t154.511337.9699galdieria_sulphurariaEME3209152.727336.7273
g19183arabidopsis_hallerig19183.t149.248134.2105ciona_savignyiENSCSAVP0000001895064.215744.6078
g19183arabidopsis_hallerig19183.t179.323366.9173chenopodium_quinoaAUR62013645-RA:cds76.449364.4928
g19183arabidopsis_hallerig19183.t165.789557.1429chenopodium_quinoaAUR62013648-RA:cds78.828868.4685
g19183arabidopsis_hallerig19183.t175.939865.7895chenopodium_quinoaAUR62004203-RA:cds79.215768.6274
g19183arabidopsis_hallerig19183.t181.954971.0526citrus_clementinaESR4136578.136267.7419
g19183arabidopsis_hallerig19183.t147.368436.8421ostreococcus_lucimarinusABO9900268.852553.5519
g19183arabidopsis_hallerig19183.t148.496234.2105saccharomyces_cerevisiaeYOR006C41.214129.0735
g19183arabidopsis_hallerig19183.t179.323366.9173actinidia_chinensisPSS3671278.731366.4179
g19183arabidopsis_hallerig19183.t174.436162.406leersia_perrieriLPERR03G06230.172.794161.0294
g19183arabidopsis_hallerig19183.t170.300860.9023aegilops_tauschiiAET4Gv20652400.376.326566.1225
g19183arabidopsis_hallerig19183.t173.684262.406musa_acuminataMa06_p11990.172.058861.0294
g19183arabidopsis_hallerig19183.t157.518842.4812selaginella_moellendorffiiEFJ2018773.205754.067
g19183arabidopsis_hallerig19183.t157.518842.8571selaginella_moellendorffiiEFJ2313074.634155.6098
g19183arabidopsis_hallerig19183.t174.81262.406panicum_halliiPUZ4239164.820854.0717
g19183arabidopsis_hallerig19183.t190.977484.9624arabis_alpinaKFK2530282.876777.3973
g19183arabidopsis_hallerig19183.t183.458670.3008quercus_lobataQL06p050567:mrna69.811358.805
g19183arabidopsis_hallerig19183.t192.105387.218eutrema_salsugineumESQ4095091.417986.5672
g19183arabidopsis_hallerig19183.t162.030151.5038kalanchoe_fedtschenkoiKaladp0095s0099.1.v1.173.333360.8889
g19183arabidopsis_hallerig19183.t165.037654.8872kalanchoe_fedtschenkoiKaladp0192s0017.1.v1.1.CDS.172.995861.6034
g19183arabidopsis_hallerig19183.t173.308363.1579hordeum_vulgareHORVU.MOREX.r3.4HG0399930.170.652260.8696
g19183arabidopsis_hallerig19183.t177.067766.5414rosa_chinensisPRQ4887377.067766.5414
g19183arabidopsis_hallerig19183.t173.308360.9023oryza_barthiiOBART03G06900.274.427561.8321
g19183arabidopsis_hallerig19183.t162.78247.7444chara_brauniiGBG615889.869987.50591
g19183arabidopsis_hallerig19183.t185.714370.6767corymbia_citriodoracds-KAF8012064.183.211768.6131
g19183arabidopsis_hallerig19183.t190.225684.9624brassica_rapa_ro18A10p034410.1_BraROA.181.081176.3513
g19183arabidopsis_hallerig19183.t175.563960.5263olea_europaeaOE9A099017C169.791755.9028
g19183arabidopsis_hallerig19183.t183.458669.1729eucalyptus_grandisKCW5442481.021967.1533
g19183arabidopsis_hallerig19183.t146.240632.7068cyanidioschyzon_merolaeCMD016CT55.405439.1892
g19183arabidopsis_hallerig19183.t194.360989.4737camelina_sativaCsa13g011820.192.619987.8229
g19183arabidopsis_hallerig19183.t194.736889.8496camelina_sativaCsa08g054530.192.988988.1919
g19183arabidopsis_hallerig19183.t194.360989.0977camelina_sativaCsa20g015330.192.619987.4539
g19183arabidopsis_hallerig19183.t171.804559.7744digitaria_exilisDexi9B01G0043640.1:cds67.017555.7895
g19183arabidopsis_hallerig19183.t171.804559.7744digitaria_exilisDexi9A01G0044360.1:cds67.017555.7895
g19183arabidopsis_hallerig19183.t174.81262.406eragrostis_tefEt_4B_038721.CDS65.89454.9669
g19183arabidopsis_hallerig19183.t174.81262.406eragrostis_tefEt_4A_034581.CDS65.89454.9669
g19183arabidopsis_hallerig19183.t152.631643.2331triticum_dicoccoidesTRIDC4BG045820.171.06658.3756
g19183arabidopsis_hallerig19183.t172.180561.2782triticum_dicoccoidesTRIDC4AG006070.573.282462.2137
g19183arabidopsis_hallerig19183.t195.112892.8571arabidopsis_lyratafgenesh2_kg.6__967__AT5G10070.293.703791.4815
g19183arabidopsis_hallerig19183.t167.669257.8947saccharum_spontaneumSspon.01G0005220-1A-mRNA-1:cds82.191870.3196
g19183arabidopsis_hallerig19183.t168.79757.8947saccharum_spontaneumSspon.01G0005220-3D-mRNA-1:cds77.215264.9789
g19183arabidopsis_hallerig19183.t142.857134.2105saccharum_spontaneumSspon.01G0005220-2B-mRNA-1:cds73.548458.7097
g19183arabidopsis_hallerig19183.t172.180560.5263nymphaea_colorataNC10G0162460.1:cds65.979455.3265
g19183arabidopsis_hallerig19183.t175.563962.0301echinochloa_crusgalliscaffold179.60.cds73.090960
g19183arabidopsis_hallerig19183.t174.81262.406echinochloa_crusgalliscaffold157.95.cds73.161861.0294
g19183arabidopsis_hallerig19183.t175.18862.0301echinochloa_crusgalliscaffold9.394.cds72.992760.219
g19183arabidopsis_hallerig19183.t190.977486.8421brassica_oleraceaBo9g173520.182.876779.1096
g19183arabidopsis_hallerig19183.t176.315863.5338corchorus_capsularisOMO5600184.583370.4167
g19183arabidopsis_hallerig19183.t173.684261.6541oryza_nivaraONIVA03G06620.269.503558.156
g19183arabidopsis_hallerig19183.t174.060262.0301trifolium_pratenseTp57577_TGAC_v2_mRNA228960.429450.6135
g19183arabidopsis_hallerig19183.t175.939865.0376cynara_cardunculusKVI0855864.951855.627

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression