Description

Ensembl ID g17723 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 1682 bases Strand Minus strand
Position FJVB01000063.1 : 713330 - 715011 RNA binding domain Nup35_RRM_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g17723 Nup35_RRM_2 PF14605 1.4e-18 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g17723.t1 1068 265aa g17723.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g17723arabidopsis_hallerig20594.t162.660951.5021arabidopsis_hallerig17723.t155.094345.283
g17723arabidopsis_hallerig02544.t164.89852.6531arabidopsis_hallerig17723.t16048.6792
g17723arabidopsis_hallerig19377.t159.259347.4074arabidopsis_hallerig17723.t130.188724.1509
g17723arabidopsis_hallerig15850.t125.092318.8192arabidopsis_hallerig17723.t151.320838.4906
g17723arabidopsis_hallerig29052.t159.734544.2478arabidopsis_hallerig17723.t150.943437.7358
g17723arabidopsis_hallerig15854.t157.222245.5556arabidopsis_hallerig17723.t138.867930.9434
g17723arabidopsis_hallerig15852.t156.048441.5323arabidopsis_hallerig17723.t152.452838.8679
g17723arabidopsis_hallerig09489.t145.33936.4407arabidopsis_hallerig17723.t140.377432.4528

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g17723arabidopsis_hallerig17723.t149.056640.7547camelina_sativaCsa14g043700.161.611451.1848
g17723arabidopsis_hallerig17723.t139.245331.3208camelina_sativaCsa03g039090.15039.9038
g17723arabidopsis_hallerig17723.t195.471794.3396arabidopsis_lyrataAl_scaffold_0001_345291.666790.5797

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression