RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | g15854 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
958 bases |
Strand |
Plus strand |
Position |
FJVB01000049.1 : 859881 - 860838 |
RNA binding domain |
Nup35_RRM_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
g15854 |
Nup35_RRM_2 |
PF14605 |
2.4e-13 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
g15854.t1 |
653 |
180aa |
g15854.t1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g15854 | arabidopsis_halleri | g15850.t1 | 26.5683 | 23.2472 | arabidopsis_halleri | g15854.t1 | 80 | 70 |
g15854 | arabidopsis_halleri | g15852.t1 | 58.4677 | 52.8226 | arabidopsis_halleri | g15854.t1 | 80.5556 | 72.7778 |
g15854 | arabidopsis_halleri | g19377.t1 | 46.6667 | 38.5185 | arabidopsis_halleri | g15854.t1 | 35 | 28.8889 |
g15854 | arabidopsis_halleri | g29052.t1 | 53.9823 | 45.1327 | arabidopsis_halleri | g15854.t1 | 67.7778 | 56.6667 |
g15854 | arabidopsis_halleri | g20594.t1 | 40.3433 | 28.7554 | arabidopsis_halleri | g15854.t1 | 52.2222 | 37.2222 |
g15854 | arabidopsis_halleri | g17723.t1 | 38.8679 | 30.9434 | arabidopsis_halleri | g15854.t1 | 57.2222 | 45.5556 |
g15854 | arabidopsis_halleri | g02544.t1 | 39.5918 | 28.5714 | arabidopsis_halleri | g15854.t1 | 53.8889 | 38.8889 |
g15854 | arabidopsis_halleri | g09489.t1 | 36.8644 | 26.2712 | arabidopsis_halleri | g15854.t1 | 48.3333 | 34.4444 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g15854 | arabidopsis_halleri | g15854.t1 | 85 | 77.2222 | arabidopsis_thaliana | AT5G03480.1 | 47.6636 | 43.3022 |
g15854 | arabidopsis_halleri | g15854.t1 | 30 | 26.1111 | camelina_sativa | Csa13g003430.1 | 76.0563 | 66.1972 |
g15854 | arabidopsis_halleri | g15854.t1 | 75 | 61.1111 | camelina_sativa | Csa20g003530.1 | 43.5484 | 35.4839 |
g15854 | arabidopsis_halleri | g15854.t1 | 40 | 30 | camelina_sativa | Csa08g061080.1 | 41.1429 | 30.8571 |
g15854 | arabidopsis_halleri | g15854.t1 | 60.5556 | 46.1111 | camelina_sativa | Csa08g060280.1 | 40.2214 | 30.6273 |
g15854 | arabidopsis_halleri | g15854.t1 | 60 | 49.4444 | camelina_sativa | Csa12g016520.1.cds1 | 49.7696 | 41.0138 |
g15854 | arabidopsis_halleri | g15854.t1 | 46.1111 | 37.7778 | arabidopsis_lyrata | Al_scaffold_0006_223 | 43.2292 | 35.4167 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |