Description

Ensembl ID g15854 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 958 bases Strand Plus strand
Position FJVB01000049.1 : 859881 - 860838 RNA binding domain Nup35_RRM_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g15854 Nup35_RRM_2 PF14605 2.4e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g15854.t1 653 180aa g15854.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g15854arabidopsis_hallerig15850.t126.568323.2472arabidopsis_hallerig15854.t18070
g15854arabidopsis_hallerig15852.t158.467752.8226arabidopsis_hallerig15854.t180.555672.7778
g15854arabidopsis_hallerig19377.t146.666738.5185arabidopsis_hallerig15854.t13528.8889
g15854arabidopsis_hallerig29052.t153.982345.1327arabidopsis_hallerig15854.t167.777856.6667
g15854arabidopsis_hallerig20594.t140.343328.7554arabidopsis_hallerig15854.t152.222237.2222
g15854arabidopsis_hallerig17723.t138.867930.9434arabidopsis_hallerig15854.t157.222245.5556
g15854arabidopsis_hallerig02544.t139.591828.5714arabidopsis_hallerig15854.t153.888938.8889
g15854arabidopsis_hallerig09489.t136.864426.2712arabidopsis_hallerig15854.t148.333334.4444

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g15854arabidopsis_hallerig15854.t18577.2222arabidopsis_thalianaAT5G03480.147.663643.3022
g15854arabidopsis_hallerig15854.t13026.1111camelina_sativaCsa13g003430.176.056366.1972
g15854arabidopsis_hallerig15854.t17561.1111camelina_sativaCsa20g003530.143.548435.4839
g15854arabidopsis_hallerig15854.t14030camelina_sativaCsa08g061080.141.142930.8571
g15854arabidopsis_hallerig15854.t160.555646.1111camelina_sativaCsa08g060280.140.221430.6273
g15854arabidopsis_hallerig15854.t16049.4444camelina_sativaCsa12g016520.1.cds149.769641.0138
g15854arabidopsis_hallerig15854.t146.111137.7778arabidopsis_lyrataAl_scaffold_0006_22343.229235.4167

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression