RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | g15852 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
1388 bases |
Strand |
Plus strand |
Position |
FJVB01000049.1 : 854911 - 856298 |
RNA binding domain |
Nup35_RRM_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
g15852 |
Nup35_RRM_2 |
PF14605 |
1.1e-18 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
g15852.t1 |
895 |
248aa |
g15852.t1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g15852 | arabidopsis_halleri | g15850.t1 | 38.5609 | 36.1624 | arabidopsis_halleri | g15852.t1 | 84.2742 | 79.0323 |
g15852 | arabidopsis_halleri | g15854.t1 | 80.5556 | 72.7778 | arabidopsis_halleri | g15852.t1 | 58.4677 | 52.8226 |
g15852 | arabidopsis_halleri | g19377.t1 | 81.4815 | 74.0741 | arabidopsis_halleri | g15852.t1 | 44.3548 | 40.3226 |
g15852 | arabidopsis_halleri | g29052.t1 | 66.8142 | 56.1947 | arabidopsis_halleri | g15852.t1 | 60.8871 | 51.2097 |
g15852 | arabidopsis_halleri | g20594.t1 | 48.927 | 36.9099 | arabidopsis_halleri | g15852.t1 | 45.9677 | 34.6774 |
g15852 | arabidopsis_halleri | g17723.t1 | 52.4528 | 38.8679 | arabidopsis_halleri | g15852.t1 | 56.0484 | 41.5323 |
g15852 | arabidopsis_halleri | g02544.t1 | 48.1633 | 33.8776 | arabidopsis_halleri | g15852.t1 | 47.5806 | 33.4677 |
g15852 | arabidopsis_halleri | g09489.t1 | 46.6102 | 35.5932 | arabidopsis_halleri | g15852.t1 | 44.3548 | 33.871 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g15852 | arabidopsis_halleri | g15852.t1 | 20.5645 | 17.3387 | camelina_sativa | Csa13g003430.1 | 71.831 | 60.5634 |
g15852 | arabidopsis_halleri | g15852.t1 | 65.7258 | 52.0161 | camelina_sativa | Csa20g003530.1 | 52.5806 | 41.6129 |
g15852 | arabidopsis_halleri | g15852.t1 | 29.0323 | 22.5806 | camelina_sativa | Csa08g061080.1 | 41.1429 | 32 |
g15852 | arabidopsis_halleri | g15852.t1 | 54.4355 | 43.9516 | camelina_sativa | Csa08g060280.1 | 49.8155 | 40.2214 |
g15852 | arabidopsis_halleri | g15852.t1 | 43.1452 | 35.8871 | camelina_sativa | Csa12g016520.1.cds1 | 49.3088 | 41.0138 |
g15852 | arabidopsis_halleri | g15852.t1 | 97.1774 | 96.371 | arabidopsis_lyrata | Al_scaffold_0006_254 | 97.1774 | 96.371 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |