Description

Ensembl ID g15852 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 1388 bases Strand Plus strand
Position FJVB01000049.1 : 854911 - 856298 RNA binding domain Nup35_RRM_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g15852 Nup35_RRM_2 PF14605 1.1e-18 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g15852.t1 895 248aa g15852.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g15852arabidopsis_hallerig15850.t138.560936.1624arabidopsis_hallerig15852.t184.274279.0323
g15852arabidopsis_hallerig15854.t180.555672.7778arabidopsis_hallerig15852.t158.467752.8226
g15852arabidopsis_hallerig19377.t181.481574.0741arabidopsis_hallerig15852.t144.354840.3226
g15852arabidopsis_hallerig29052.t166.814256.1947arabidopsis_hallerig15852.t160.887151.2097
g15852arabidopsis_hallerig20594.t148.92736.9099arabidopsis_hallerig15852.t145.967734.6774
g15852arabidopsis_hallerig17723.t152.452838.8679arabidopsis_hallerig15852.t156.048441.5323
g15852arabidopsis_hallerig02544.t148.163333.8776arabidopsis_hallerig15852.t147.580633.4677
g15852arabidopsis_hallerig09489.t146.610235.5932arabidopsis_hallerig15852.t144.354833.871

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g15852arabidopsis_hallerig15852.t120.564517.3387camelina_sativaCsa13g003430.171.83160.5634
g15852arabidopsis_hallerig15852.t165.725852.0161camelina_sativaCsa20g003530.152.580641.6129
g15852arabidopsis_hallerig15852.t129.032322.5806camelina_sativaCsa08g061080.141.142932
g15852arabidopsis_hallerig15852.t154.435543.9516camelina_sativaCsa08g060280.149.815540.2214
g15852arabidopsis_hallerig15852.t143.145235.8871camelina_sativaCsa12g016520.1.cds149.308841.0138
g15852arabidopsis_hallerig15852.t197.177496.371arabidopsis_lyrataAl_scaffold_0006_25497.177496.371

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression