RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | g15850 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
5501 bases |
Strand |
Minus strand |
Position |
FJVB01000049.1 : 846446 - 851946 |
RNA binding domain |
Nup35_RRM_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
g15850 |
Nup35_RRM_2 |
PF14605 |
4.6e-39 |
1 |
g15850 |
Nup35_RRM_2 |
PF14605 |
4.6e-39 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
g15850.t1 |
1754 |
542aa |
g15850.t1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g15850 | arabidopsis_halleri | g15852.t1 | 84.2742 | 79.0323 | arabidopsis_halleri | g15850.t1 | 38.5609 | 36.1624 |
g15850 | arabidopsis_halleri | g15854.t1 | 80 | 70 | arabidopsis_halleri | g15850.t1 | 26.5683 | 23.2472 |
g15850 | arabidopsis_halleri | g19377.t1 | 74.0741 | 65.1852 | arabidopsis_halleri | g15850.t1 | 18.4502 | 16.2362 |
g15850 | arabidopsis_halleri | g29052.t1 | 67.2566 | 54.4248 | arabidopsis_halleri | g15850.t1 | 28.0443 | 22.6937 |
g15850 | arabidopsis_halleri | g20594.t1 | 50.2146 | 36.4807 | arabidopsis_halleri | g15850.t1 | 21.5867 | 15.6827 |
g15850 | arabidopsis_halleri | g17723.t1 | 51.3208 | 38.4906 | arabidopsis_halleri | g15850.t1 | 25.0923 | 18.8192 |
g15850 | arabidopsis_halleri | g02544.t1 | 48.9796 | 34.2857 | arabidopsis_halleri | g15850.t1 | 22.1402 | 15.4982 |
g15850 | arabidopsis_halleri | g09489.t1 | 43.6441 | 33.4746 | arabidopsis_halleri | g15850.t1 | 19.0037 | 14.5756 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g15850 | arabidopsis_halleri | g15850.t1 | 9.40959 | 7.56458 | camelina_sativa | Csa13g003430.1 | 71.831 | 57.7465 |
g15850 | arabidopsis_halleri | g15850.t1 | 28.7823 | 22.8782 | camelina_sativa | Csa20g003530.1 | 50.3226 | 40 |
g15850 | arabidopsis_halleri | g15850.t1 | 12.5461 | 9.22509 | camelina_sativa | Csa08g061080.1 | 38.8571 | 28.5714 |
g15850 | arabidopsis_halleri | g15850.t1 | 23.6162 | 18.0812 | camelina_sativa | Csa08g060280.1 | 47.2325 | 36.1624 |
g15850 | arabidopsis_halleri | g15850.t1 | 19.7417 | 15.8672 | camelina_sativa | Csa12g016520.1.cds1 | 49.3088 | 39.6313 |
g15850 | arabidopsis_halleri | g15850.t1 | 38.3764 | 36.1624 | arabidopsis_lyrata | Al_scaffold_0003_2551 | 65.2038 | 61.442 |
g15850 | arabidopsis_halleri | g15850.t1 | 38.9299 | 37.4539 | arabidopsis_lyrata | Al_scaffold_0006_251 | 80.5343 | 77.4809 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |