Description

Ensembl ID g15850 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 5501 bases Strand Minus strand
Position FJVB01000049.1 : 846446 - 851946 RNA binding domain Nup35_RRM_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g15850 Nup35_RRM_2 PF14605 4.6e-39 1
g15850 Nup35_RRM_2 PF14605 4.6e-39 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g15850.t1 1754 542aa g15850.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g15850arabidopsis_hallerig15852.t184.274279.0323arabidopsis_hallerig15850.t138.560936.1624
g15850arabidopsis_hallerig15854.t18070arabidopsis_hallerig15850.t126.568323.2472
g15850arabidopsis_hallerig19377.t174.074165.1852arabidopsis_hallerig15850.t118.450216.2362
g15850arabidopsis_hallerig29052.t167.256654.4248arabidopsis_hallerig15850.t128.044322.6937
g15850arabidopsis_hallerig20594.t150.214636.4807arabidopsis_hallerig15850.t121.586715.6827
g15850arabidopsis_hallerig17723.t151.320838.4906arabidopsis_hallerig15850.t125.092318.8192
g15850arabidopsis_hallerig02544.t148.979634.2857arabidopsis_hallerig15850.t122.140215.4982
g15850arabidopsis_hallerig09489.t143.644133.4746arabidopsis_hallerig15850.t119.003714.5756

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g15850arabidopsis_hallerig15850.t19.409597.56458camelina_sativaCsa13g003430.171.83157.7465
g15850arabidopsis_hallerig15850.t128.782322.8782camelina_sativaCsa20g003530.150.322640
g15850arabidopsis_hallerig15850.t112.54619.22509camelina_sativaCsa08g061080.138.857128.5714
g15850arabidopsis_hallerig15850.t123.616218.0812camelina_sativaCsa08g060280.147.232536.1624
g15850arabidopsis_hallerig15850.t119.741715.8672camelina_sativaCsa12g016520.1.cds149.308839.6313
g15850arabidopsis_hallerig15850.t138.376436.1624arabidopsis_lyrataAl_scaffold_0003_255165.203861.442
g15850arabidopsis_hallerig15850.t138.929937.4539arabidopsis_lyrataAl_scaffold_0006_25180.534377.4809

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression