Description

Ensembl ID g11071 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 1355 bases Strand Minus strand
Position FJVB01000026.1 : 1396017 - 1397371 RNA binding domain 2OG-FeII_Oxy_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g11071 2OG-FeII_Oxy_2 PF13532 2.2e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g11071.t1 1024 268aa g11071.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g11071arabidopsis_hallerig24989.t149.309747.14arabidopsis_hallerig11071.t193.283689.1791
g11071arabidopsis_hallerig24310.t165.361456.6265arabidopsis_hallerig11071.t180.970170.1493
g11071arabidopsis_hallerig31367.t164.462853.3058arabidopsis_hallerig11071.t158.20948.1343
g11071arabidopsis_hallerig03108.t143.680338.1041arabidopsis_hallerig11071.t187.686676.4925
g11071arabidopsis_hallerig10116.t120.500810.9546arabidopsis_hallerig11071.t148.880626.1194
g11071arabidopsis_hallerig09513.t126.757416.0998arabidopsis_hallerig11071.t144.029926.4925
g11071arabidopsis_hallerig09047.t122.775812.6335arabidopsis_hallerig11071.t147.761226.4925

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g11071arabidopsis_hallerig11071.t164.552247.3881papaver_somniferumRZC8389245.052133.0729
g11071arabidopsis_hallerig11071.t164.179147.3881papaver_somniferumRZC8389353.7539.6875
g11071arabidopsis_hallerig11071.t163.432854.4776papaver_somniferumRZC4482535.196730.2277
g11071arabidopsis_hallerig11071.t185.074675.3731papaver_somniferumRZC6664526.237123.2451
g11071arabidopsis_hallerig11071.t186.940377.9851cannabis_sativa_femalecds.evm.model.04.211233.573530.1153
g11071arabidopsis_hallerig11071.t12521.2687ficus_caricaFCD_00008593-RA:cds22.866919.4539
g11071arabidopsis_hallerig11071.t188.432875.7463citrullus_lanatusCla97C01G019650.126.450922.6562
g11071arabidopsis_hallerig11071.t188.432875.7463cucumis_sativusKGN4890747.49540.6814
g11071arabidopsis_hallerig11071.t187.313476.8657theobroma_cacaoEOX9086645.261139.8453
g11071arabidopsis_hallerig11071.t187.313474.2537cucumis_meloMELO3C007897.2.146.839.8
g11071arabidopsis_hallerig11071.t185.447872.0149populus_trichocarpaPotri.005G114800.1.v4.145.256938.1423
g11071arabidopsis_hallerig11071.t182.462767.9104populus_trichocarpaPotri.007G012200.1.v4.143.248535.6164
g11071arabidopsis_hallerig11071.t193.656786.5672brassica_junceacds.BjuB03g03560S52.953648.9451
g11071arabidopsis_hallerig11071.t193.656786.194brassica_junceacds.BjuA07g02340S53.747349.4647
g11071arabidopsis_hallerig11071.t193.656786.194brassica_napusCDY3814553.747349.4647
g11071arabidopsis_hallerig11071.t193.283685.8209brassica_napusCDY478045046
g11071arabidopsis_hallerig11071.t183.582170.5224malus_domestica_goldenmRNA:MD02G011380043.326936.5571
g11071arabidopsis_hallerig11071.t185.447873.5075malus_domestica_goldenmRNA:MD15G021560044.90238.6275
g11071arabidopsis_hallerig11071.t172.761261.194marchantia_polymorphaPTQ5055443.141636.2832
g11071arabidopsis_hallerig11071.t185.447875prunus_dulcisVVA0987145.167739.645
g11071arabidopsis_hallerig11071.t185.074674.6269prunus_persicaONH9706245.148539.604
g11071arabidopsis_hallerig11071.t185.447877.2388cajanus_cajanC.cajan_38208.t47.708343.125
g11071arabidopsis_hallerig11071.t183.955274.6269glycine_maxKRH0532543.269238.4615
g11071arabidopsis_hallerig11071.t184.701576.4925glycine_maxKRH1571143.403439.1969
g11071arabidopsis_hallerig11071.t181.343370.5224lupinus_angustifoliusOIW1496058.760150.9434
g11071arabidopsis_hallerig11071.t186.567274.6269lupinus_angustifoliusOIW0399948.945142.1941
g11071arabidopsis_hallerig11071.t183.582173.8806medicago_truncatulaKEH3989042.829837.8585
g11071arabidopsis_hallerig11071.t185.820975phaseolus_vulgarisESW3310944.145938.5797
g11071arabidopsis_hallerig11071.t183.582172.3881pisum_sativumPsat6g024280.1.cds42.105336.4662
g11071arabidopsis_hallerig11071.t184.701576.1194vigna_radiataVradi06g13130.147.789542.9474
g11071arabidopsis_hallerig11071.t183.20974.6269vigna_unguiculataVigun08g047600.1.v1.247.145942.2833
g11071arabidopsis_hallerig11071.t183.955275vigna_angularisKOM4876647.468442.4051
g11071arabidopsis_hallerig11071.t186.19475manihot_esculentaOAY6086146.015940.0398
g11071arabidopsis_hallerig11071.t185.074674.6269manihot_esculentaOAY5753543.930638.5356
g11071arabidopsis_hallerig11071.t133.20927.6119capsicum_annuumPHT8899654.938345.679
g11071arabidopsis_hallerig11071.t183.20972.7612capsicum_annuumPHT9114746.947441.0526
g11071arabidopsis_hallerig11071.t172.388161.9403solanum_tuberosumPGSC0003DMT40006135428.571424.4477
g11071arabidopsis_hallerig11071.t182.835872.0149solanum_tuberosumPGSC0003DMT40000915641.807936.3465
g11071arabidopsis_hallerig11071.t180.970168.2836solanum_lycopersicumSolyc02g062180.3.133.748128.4603
g11071arabidopsis_hallerig11071.t183.20972.3881solanum_lycopersicumSolyc02g083960.3.141.449836.0595
g11071arabidopsis_hallerig11071.t185.074673.1343sesamum_indicumSIN_1025331.t49.032342.1505
g11071arabidopsis_hallerig11071.t185.820978.7313helianthus_annuusmRNA:HanXRQr2_Chr16g077647146.938843.0612
g11071arabidopsis_hallerig11071.t186.567276.4925lactuca_sativacds-PLY96081.142.96337.963
g11071arabidopsis_hallerig11071.t179.850767.5373lolium_perennecds.KYUSt_chr7.3879931.98827.0553
g11071arabidopsis_hallerig11071.t179.477665.6716avena_sativa_ot3098cds.AVESA.00001b.r3.7Ag0000733.130.603425.2874
g11071arabidopsis_hallerig11071.t179.104565.6716avena_sativa_ot3098cds.AVESA.00001b.r3.7Dg0003409.430.635825.4335
g11071arabidopsis_hallerig11071.t179.477665.6716avena_sativa_ot3098cds.AVESA.00001b.r3.5Cg0003212.131.649326.1516
g11071arabidopsis_hallerig11071.t179.477665.6716avena_sativa_sangAVESA.00010b.r2.5CG0864500.1.CDS32.819727.1186
g11071arabidopsis_hallerig11071.t179.477665.6716avena_sativa_sangAVESA.00010b.r2.7DG1337970.1.CDS33.177627.4143
g11071arabidopsis_hallerig11071.t179.477665.6716avena_sativa_sangAVESA.00010b.r2.7AG1202400.1.CDS32.972127.2446
g11071arabidopsis_hallerig11071.t169.029957.4627oryza_longistaminataKN538905.1_FGP01534.579428.785
g11071arabidopsis_hallerig11071.t179.104566.791oryza_rufipogonORUFI06G02440.134.415629.0584
g11071arabidopsis_hallerig11071.t178.731365.6716oryza_brachyanthaOB06G12310.134.308928.6179
g11071arabidopsis_hallerig11071.t179.477666.0448oryza_punctataOPUNC06G02310.133.755928.0507
g11071arabidopsis_hallerig11071.t179.104566.4179oryza_glaberrimaORGLA06G0024500.134.415628.8961
g11071arabidopsis_hallerig11071.t178.731366.791secale_cerealeSECCE4Rv1G0269920.133.977528.8245
g11071arabidopsis_hallerig11071.t179.477666.4179setaria_viridisTKW1954234.577928.8961
g11071arabidopsis_hallerig11071.t177.985166.4179sorghum_bicolorKXG1924934.206229.1326
g11071arabidopsis_hallerig11071.t179.104566.0448setaria_italicaKQL0919734.304228.6408
g11071arabidopsis_hallerig11071.t179.104566.791triticum_aestivumTraesCS4A02G378300.143.265336.5306
g11071arabidopsis_hallerig11071.t179.850767.1642triticum_aestivumTraesCS7A02G081300.134.967329.4118
g11071arabidopsis_hallerig11071.t161.19451.8657triticum_aestivumTraesCS7D02G075200.141.943735.5499
g11071arabidopsis_hallerig11071.t178.358266.0448zea_maysZm00001eb377750_P00234.146328.7805
g11071arabidopsis_hallerig11071.t181.716470.5224ananas_comosusAco018614.1.mrna140.934635.3271
g11071arabidopsis_hallerig11071.t165.298554.8507asparagus_officinalisONK8016249.575141.6431
g11071arabidopsis_hallerig11071.t179.850767.1642triticum_turgidumTRITD7Av1G023080.234.967329.4118
g11071arabidopsis_hallerig11071.t179.104566.791triticum_turgidumTRITD4Av1G238900.134.527729.1531
g11071arabidopsis_hallerig11071.t133.582123.8806amborella_trichopodaERN1078230.508521.6949
g11071arabidopsis_hallerig11071.t185.447876.4925corylus_avellanaCav02g02060.t142.250937.8229
g11071arabidopsis_hallerig11071.t185.447875.3731gossypium_raimondiiKJB4334944.552539.2996
g11071arabidopsis_hallerig11071.t179.104566.0448brachypodium_distachyonKQK1993535.690229.798
g11071arabidopsis_hallerig11071.t183.582170.8955fraxinus_excelsiorFRAEX38873_v2_000157720.1.cds44.268837.5494
g11071arabidopsis_hallerig11071.t180.223969.0299fraxinus_excelsiorFRAEX38873_v2_000042600.1.cds44.979138.7029
g11071arabidopsis_hallerig11071.t171.641859.7015oryza_glumipatulaOGLUM06G02460.130.967725.8065
g11071arabidopsis_hallerig11071.t180.223966.4179eragrostis_curvulaTVU1274236.37930.1184
g11071arabidopsis_hallerig11071.t179.104567.1642oryza_indicaBGIOSGA022263-PA35.333330
g11071arabidopsis_hallerig11071.t187.686675vitis_viniferaVitvi04g01448_P00146.078439.4118
g11071arabidopsis_hallerig11071.t183.955274.2537nicotiana_attenuataOIT0045141.666736.8519
g11071arabidopsis_hallerig11071.t185.820974.6269coffea_canephoraCDP0190944.230838.4615
g11071arabidopsis_hallerig11071.t183.955273.1343ipomoea_trilobaitb05g24620.t143.103437.5479
g11071arabidopsis_hallerig11071.t182.462769.0299ipomoea_trilobaitb12g02930.t340.476233.8828
g11071arabidopsis_hallerig11071.t160.820951.4925triticum_urartuTuG1812S0003278000.01.T0141.68835.2941
g11071arabidopsis_hallerig11071.t179.850766.791oryza_meridionalisOMERI06G02350.124.569520.5511
g11071arabidopsis_hallerig11071.t185.074674.2537prunus_aviumPav_sc0000044.1_g620.1.mk:mrna45.238139.4841
g11071arabidopsis_hallerig11071.t179.104567.1642oryza_sativaOs06t0138200-0134.415629.2208
g11071arabidopsis_hallerig11071.t186.19475.3731pistacia_veracds-EVM0014624.145.742640
g11071arabidopsis_hallerig11071.t188.059778.3582quercus_subercds-POF19139.151.982446.2555
g11071arabidopsis_hallerig11071.t187.686678.3582quercus_subercds-POE87187.155.819549.8812
g11071arabidopsis_hallerig11071.t158.582150.7463chenopodium_quinoaAUR62043716-RA:cds69.16359.9119
g11071arabidopsis_hallerig11071.t155.59747.7612chenopodium_quinoaAUR62043238-RA:cds89.75977.1084
g11071arabidopsis_hallerig11071.t158.582150.7463chenopodium_quinoaAUR62043611-RA:cds15.498513.4255
g11071arabidopsis_hallerig11071.t182.835871.6418dioscorea_rotundataDRNTG_01859.137.563532.4873
g11071arabidopsis_hallerig11071.t185.447875.3731citrus_clementinaESR3874344.46639.2233
g11071arabidopsis_hallerig11071.t179.850766.791juglans_regiacds.Jr11_07880_p143.058336.0161
g11071arabidopsis_hallerig11071.t184.328473.5075juglans_regiacds.Jr08_17220_p141.697436.3469
g11071arabidopsis_hallerig11071.t187.313476.1194actinidia_chinensisPSS2135445.086739.3064
g11071arabidopsis_hallerig11071.t186.940375.3731actinidia_chinensisPSS3655240.592335.1916
g11071arabidopsis_hallerig11071.t180.970168.2836leersia_perrieriLPERR06G02170.134.664529.2332
g11071arabidopsis_hallerig11071.t179.477667.1642aegilops_tauschiiAET7Gv20212500.242.685436.0721
g11071arabidopsis_hallerig11071.t181.343369.403musa_acuminataMa11_p06260.136.152630.8458
g11071arabidopsis_hallerig11071.t176.492561.194selaginella_moellendorffiiEFJ2757866.775253.4202
g11071arabidopsis_hallerig11071.t176.492561.194selaginella_moellendorffiiEFJ3736670.934356.7474
g11071arabidopsis_hallerig11071.t180.223967.1642panicum_halliiPUZ6228835.245929.5082
g11071arabidopsis_hallerig11071.t191.417985.0746arabis_alpinaKFK4017147.206243.9306
g11071arabidopsis_hallerig11071.t187.686677.9851quercus_lobataQL06p032625:mrna46.62741.4683
g11071arabidopsis_hallerig11071.t194.029987.3134eutrema_salsugineumESQ5066951.219547.561
g11071arabidopsis_hallerig11071.t183.955274.2537kalanchoe_fedtschenkoiKaladp0040s0535.1.v1.144.554539.4059
g11071arabidopsis_hallerig11071.t133.20929.8507kalanchoe_fedtschenkoiKaladp0016s0357.1.v1.166.917360.1504
g11071arabidopsis_hallerig11071.t179.477666.791hordeum_vulgareHORVU.MOREX.r3.7HG0647650.135.032929.4408
g11071arabidopsis_hallerig11071.t183.20973.5075rosa_chinensisPRQ4742444.33439.165
g11071arabidopsis_hallerig11071.t178.731366.4179oryza_barthiiOBART06G02380.138.503732.4818
g11071arabidopsis_hallerig11071.t179.104564.5522chara_brauniiGBG6224413.291510.8464
g11071arabidopsis_hallerig11071.t186.567275.3731corymbia_citriodoracds-KAF8011161.145.579639.6857
g11071arabidopsis_hallerig11071.t193.656786.194brassica_rapa_ro18A07p004030.1_BraROA.150.809746.7611
g11071arabidopsis_hallerig11071.t182.462770.1493olea_europaeaOE9A046349C144.237.6
g11071arabidopsis_hallerig11071.t183.582170.5224olea_europaeaOE9A078511C144.444437.5
g11071arabidopsis_hallerig11071.t167.910458.9552eucalyptus_grandisKCW5314245.843839.7985
g11071arabidopsis_hallerig11071.t192.537385.8209camelina_sativaCsa19g054940.149.50145.9082
g11071arabidopsis_hallerig11071.t192.537385.0746camelina_sativaCsa15g076400.149.645.6
g11071arabidopsis_hallerig11071.t189.925483.9552camelina_sativaCsa01g039680.172.372467.5676
g11071arabidopsis_hallerig11071.t185.074674.2537daucus_carotaKZM9113547.010341.0309
g11071arabidopsis_hallerig11071.t141.417934.3284digitaria_exilisDexi4A01G0002540.1:cds22.289218.4739
g11071arabidopsis_hallerig11071.t172.761258.9552digitaria_exilisDexi4B01G0002690.1:cds28.718723.2695
g11071arabidopsis_hallerig11071.t180.59765.2985eragrostis_tefEt_2B_019781.CDS35.46828.7356
g11071arabidopsis_hallerig11071.t180.59765.2985eragrostis_tefEt_2A_015607.CDS35.179228.5016
g11071arabidopsis_hallerig11071.t178.731366.791triticum_dicoccoidesTRIDC7AG009160.234.032328.871
g11071arabidopsis_hallerig11071.t179.104567.1642triticum_dicoccoidesTRIDC4AG060930.334.527729.316
g11071arabidopsis_hallerig11071.t198.134397.3881arabidopsis_lyrataAl_scaffold_0008_238087.086186.4238
g11071arabidopsis_hallerig11071.t176.865766.0448saccharum_spontaneumSspon.08G0015910-2B-mRNA-1:cds38.721833.2707
g11071arabidopsis_hallerig11071.t165.671655.9701nymphaea_colorataNC2G0286860.1:cds40.835334.8028
g11071arabidopsis_hallerig11071.t179.850767.9104echinochloa_crusgalliscaffold34.604.cds34.796729.5935
g11071arabidopsis_hallerig11071.t179.850767.9104echinochloa_crusgalliscaffold507.16.cds34.967329.7386
g11071arabidopsis_hallerig11071.t179.850767.5373echinochloa_crusgalliscaffold10.133.cds21.659918.3198
g11071arabidopsis_hallerig11071.t193.283685.8209brassica_oleraceaBo7g012800.153.418849.1453
g11071arabidopsis_hallerig11071.t186.19474.2537corchorus_capsularisOMO5705744.941638.716
g11071arabidopsis_hallerig11071.t179.104566.4179oryza_nivaraONIVA06G02940.134.415628.8961
g11071arabidopsis_hallerig11071.t183.582174.2537trifolium_pratenseTp57577_TGAC_v2_mRNA4016341.869237.1963
g11071arabidopsis_hallerig11071.t177.985169.403cynara_cardunculusKVI0293942.307737.6518

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression