Description

Ensembl ID g10851 Gene ID Accession -
Symbol Alias - Full Name Replication protein A subunit
Status Confidence Length 3114 bases Strand Plus strand
Position FJVB01000026.1 : 327258 - 330371 RNA binding domain tRNA_anti-codon
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g10851 tRNA_anti-codon PF01336 1.2e-13 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g10851.t1 2086 631aa g10851.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g10851arabidopsis_hallerig19093.t140.388826.5659arabidopsis_hallerig10851.t129.635519.4929
g10851arabidopsis_hallerig23844.t192.05384.106arabidopsis_hallerig10851.t188.114180.5071
g10851arabidopsis_hallerig28300.t137.790719.186arabidopsis_hallerig10851.t110.30115.22979
g10851arabidopsis_hallerig30064.t129.120915.0183arabidopsis_hallerig10851.t125.198112.9952
g10851arabidopsis_hallerig29160.t116.61477.68432arabidopsis_hallerig10851.t125.356611.7274
g10851arabidopsis_hallerig27336.t132.026116.5577arabidopsis_hallerig10851.t123.296412.0444
g10851arabidopsis_hallerig20593.t133.875318.4282arabidopsis_hallerig10851.t119.809810.7765
g10851arabidopsis_hallerig25519.t116.57967.04961arabidopsis_hallerig10851.t120.12688.55785
g10851arabidopsis_hallerig08592.t134.121616.8919arabidopsis_hallerig10851.t116.00637.92393
g10851arabidopsis_hallerig00488.t130.188716.3522arabidopsis_hallerig10851.t122.820912.3613
g10851arabidopsis_hallerig02225.t115.21287.12766arabidopsis_hallerig10851.t122.662410.6181
g10851arabidopsis_hallerig18826.t133.439517.1975arabidopsis_hallerig10851.t116.64038.55785
g10851arabidopsis_hallerig22179.t126.283414.3737arabidopsis_hallerig10851.t120.285311.0935
g10851arabidopsis_hallerig31737.t124.788113.5593arabidopsis_hallerig10851.t118.54210.1426
g10851arabidopsis_hallerig18671.t131.368817.3004arabidopsis_hallerig10851.t126.14914.4216
g10851arabidopsis_hallerig03308.t132.126717.1946arabidopsis_hallerig10851.t111.2526.02219
g10851arabidopsis_hallerig18727.t129.545515.4959arabidopsis_hallerig10851.t122.662411.8859
g10851arabidopsis_hallerig13382.t127.212413.9381arabidopsis_hallerig10851.t119.49299.98415
g10851arabidopsis_hallerig19761.t132.775914.0468arabidopsis_hallerig10851.t115.53096.6561
g10851arabidopsis_hallerig25594.t217.7348.86699arabidopsis_hallerig10851.t117.11578.55785
g10851arabidopsis_hallerig31013.t130.332712.7202arabidopsis_hallerig10851.t124.564210.3011
g10851arabidopsis_hallerig31655.t126.418413.2979arabidopsis_hallerig10851.t123.613311.8859
g10851arabidopsis_hallerig09250.t136.789317.7258arabidopsis_hallerig10851.t117.43268.39937
g10851arabidopsis_hallerig31228.t138.139517.6744arabidopsis_hallerig10851.t112.99526.02219
g10851arabidopsis_hallerig18478.t152.343832.8125arabidopsis_hallerig10851.t153.090333.2805
g10851arabidopsis_hallerig07575.t139.523822.9762arabidopsis_hallerig10851.t152.614930.5864
g10851arabidopsis_hallerig15405.t143.658224.9666arabidopsis_hallerig10851.t151.822529.6355

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g10851arabidopsis_hallerig10851.t179.714764.0254papaver_somniferumRZC5990982.189566.0131
g10851arabidopsis_hallerig10851.t179.080862.916papaver_somniferumRZC5997681.402964.7635
g10851arabidopsis_hallerig10851.t184.786169.7306cannabis_sativa_femalecds.evm.model.03.133785.737270.5128
g10851arabidopsis_hallerig10851.t156.101439.3027physcomitrium_patensPp3c1_20770V3.173.90451.7745
g10851arabidopsis_hallerig10851.t184.944568.4628ficus_caricaFCD_00014786-RA:cds85.214668.6804
g10851arabidopsis_hallerig10851.t182.725867.3534beta_vulgarisKMS9779983.386667.8914
g10851arabidopsis_hallerig10851.t182.567465.9271citrullus_lanatusCla97C06G125140.183.627666.7737
g10851arabidopsis_hallerig10851.t182.250465.9271cucumis_sativusKGN6373283.306666.7737
g10851arabidopsis_hallerig10851.t182.567467.5119theobroma_cacaoEOY2208076.957262.9247
g10851arabidopsis_hallerig10851.t198.098395.0872arabidopsis_thalianaAT5G61000.198.410295.3895
g10851arabidopsis_hallerig10851.t182.408965.7686cucumis_meloMELO3C017228.2.182.018965.4574
g10851arabidopsis_hallerig10851.t183.518267.3534populus_trichocarpaPotri.015G057300.1.v4.183.518267.3534
g10851arabidopsis_hallerig10851.t193.502488.1141brassica_junceacds.BjuA09g65010S94.70389.2456
g10851arabidopsis_hallerig10851.t194.770288.9065brassica_junceacds.BjuB02g64720S95.833389.9038
g10851arabidopsis_hallerig10851.t191.283785.5784brassica_junceacds.BjuA03g18220S94.581388.67
g10851arabidopsis_hallerig10851.t178.1373.5341brassica_napusCDY2309147.725144.9177
g10851arabidopsis_hallerig10851.t182.725878.2884brassica_napusCDY0217792.389487.4336
g10851arabidopsis_hallerig10851.t193.502488.2726brassica_napusCDY1682694.70389.4061
g10851arabidopsis_hallerig10851.t193.660988.2726brassica_napusCDX8719695.016189.5498
g10851arabidopsis_hallerig10851.t182.091966.878malus_domestica_goldenmRNA:MD14G018390085.761669.8675
g10851arabidopsis_hallerig10851.t183.993768.9382malus_domestica_goldenmRNA:MD06G018800083.464668.5039
g10851arabidopsis_hallerig10851.t167.511949.9208marchantia_polymorphaPTQ3161667.405149.8418
g10851arabidopsis_hallerig10851.t181.933467.3534prunus_dulcisVVA2762884.893369.7865
g10851arabidopsis_hallerig10851.t181.77567.1949prunus_persicaONI0887484.729169.6223
g10851arabidopsis_hallerig10851.t181.933467.5119cajanus_cajanC.cajan_02877.t84.754169.8361
g10851arabidopsis_hallerig10851.t180.665667.0365glycine_maxKRH5680782.096868.2258
g10851arabidopsis_hallerig10851.t181.14166.7195glycine_maxKRH0313682.714168.0129
g10851arabidopsis_hallerig10851.t179.873265.4517lupinus_angustifoliusOIW1966482.758667.8161
g10851arabidopsis_hallerig10851.t181.299564.9762lupinus_angustifoliusOIW1852384.37567.4342
g10851arabidopsis_hallerig10851.t130.903324.2472medicago_truncatulaKEH3202973.033757.3034
g10851arabidopsis_hallerig10851.t180.348765.6101medicago_truncatulaKEH3202782.038866.9903
g10851arabidopsis_hallerig10851.t181.77567.6704phaseolus_vulgarisESW2722683.630569.2058
g10851arabidopsis_hallerig10851.t181.616566.2441pisum_sativumPsat4g047800.1.cds84.564968.6371
g10851arabidopsis_hallerig10851.t181.616567.8288vigna_radiataVradi07g17560.173.571461.1429
g10851arabidopsis_hallerig10851.t182.250467.6704vigna_unguiculataVigun03g341800.1.v1.284.116769.2058
g10851arabidopsis_hallerig10851.t181.616567.5119vigna_angularisKOM3317583.468469.0438
g10851arabidopsis_hallerig10851.t184.310669.5721manihot_esculentaOAY4749985.256470.3526
g10851arabidopsis_hallerig10851.t184.786170.0475capsicum_annuumPHT8833386.991971.8699
g10851arabidopsis_hallerig10851.t185.10371.4739solanum_tuberosumPGSC0003DMT40006332987.459373.4528
g10851arabidopsis_hallerig10851.t184.786171.3154solanum_lycopersicumSolyc03g115050.3.183.724670.4225
g10851arabidopsis_hallerig10851.t184.944567.9873sesamum_indicumSIN_1017420.t86.173668.9711
g10851arabidopsis_hallerig10851.t179.873263.8669helianthus_annuusmRNA:HanXRQr2_Chr02g006176183.860267.0549
g10851arabidopsis_hallerig10851.t180.507164.9762helianthus_annuusmRNA:HanXRQr2_Chr04g015609184.525868.2196
g10851arabidopsis_hallerig10851.t180.824165.1347lactuca_sativacds-PLY86838.184.858668.386
g10851arabidopsis_hallerig10851.t178.446961.3312lolium_perennecds.KYUSt_chr4.4520680.882463.2353
g10851arabidopsis_hallerig10851.t178.763962.4406avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0000118.173.738958.457
g10851arabidopsis_hallerig10851.t178.288461.9651avena_sativa_ot3098cds.AVESA.00001b.r3.1Dg0003044.176.234660.3395
g10851arabidopsis_hallerig10851.t178.605462.916avena_sativa_ot3098cds.AVESA.00001b.r3.4Cg0003694.177.258661.838
g10851arabidopsis_hallerig10851.t178.288461.9651avena_sativa_sangAVESA.00010b.r2.1DG0134310.1.CDS80.587363.7847
g10851arabidopsis_hallerig10851.t178.605462.916avena_sativa_sangAVESA.00010b.r2.4CG1330330.1.CDS81.045864.8693
g10851arabidopsis_hallerig10851.t178.922362.599avena_sativa_sangAVESA.00010b.r2.5AG0797010.1.CDS81.372664.5425
g10851arabidopsis_hallerig10851.t178.763963.7084oryza_longistaminataKN538847.1_FGP00178.888963.8095
g10851arabidopsis_hallerig10851.t178.922364.0254oryza_rufipogonORUFI03G08340.179.047664.127
g10851arabidopsis_hallerig10851.t178.605463.5499oryza_brachyanthaOB03G18650.178.48163.4494
g10851arabidopsis_hallerig10851.t179.080863.8669oryza_punctataOPUNC03G08000.179.332364.07
g10851arabidopsis_hallerig10851.t178.922364.0254oryza_glaberrimaORGLA03G0080400.179.047664.127
g10851arabidopsis_hallerig10851.t180.190262.4406secale_cerealeSECCE7Rv1G0472160.181.350563.3441
g10851arabidopsis_hallerig10851.t176.862161.0143setaria_viridisTKV9744577.849161.7978
g10851arabidopsis_hallerig10851.t178.1361.9651sorghum_bicolorEER9527679.133262.7608
g10851arabidopsis_hallerig10851.t176.862160.8558setaria_italicaKQK9196677.849161.6372
g10851arabidopsis_hallerig10851.t175.118959.271triticum_aestivumTraesCS4B02G246900.180.067663.1757
g10851arabidopsis_hallerig10851.t179.556362.4406triticum_aestivumTraesCS4A02G058000.180.707463.3441
g10851arabidopsis_hallerig10851.t179.873262.4406triticum_aestivumTraesCS4D02G246300.181.028963.3441
g10851arabidopsis_hallerig10851.t137.08429.794zea_maysZm00001eb282530_P00171.779157.6687
g10851arabidopsis_hallerig10851.t177.020661.0143zea_maysZm00001eb400180_P00178.009661.7978
g10851arabidopsis_hallerig10851.t175.752860.0634zea_maysZm00001eb008630_P00177.471661.4263
g10851arabidopsis_hallerig10851.t180.031766.2441asparagus_officinalisONK6469483.471169.0909
g10851arabidopsis_hallerig10851.t114.104611.5689asparagus_officinalisONK6420488.118872.2772
g10851arabidopsis_hallerig10851.t143.106234.3899asparagus_officinalisONK757438063.8235
g10851arabidopsis_hallerig10851.t179.873262.599triticum_turgidumTRITD4Av1G021300.181.028963.5048
g10851arabidopsis_hallerig10851.t176.862160.6973triticum_turgidumTRITD4Bv1G148680.277.974361.5756
g10851arabidopsis_hallerig10851.t173.534159.1125amborella_trichopodaERN0753479.316263.7607
g10851arabidopsis_hallerig10851.t185.261570.6815corylus_avellanaCav03g06930.t185.532670.9062
g10851arabidopsis_hallerig10851.t184.152168.9382gossypium_raimondiiKJB1941484.824369.4888
g10851arabidopsis_hallerig10851.t179.714763.3914brachypodium_distachyonKQK2290279.212662.9921
g10851arabidopsis_hallerig10851.t184.786167.9873fraxinus_excelsiorFRAEX38873_v2_000337800.1.cds85.463368.5303
g10851arabidopsis_hallerig10851.t184.152168.3043fraxinus_excelsiorFRAEX38873_v2_000256250.2.cds85.369869.2926
g10851arabidopsis_hallerig10851.t19.350246.97306eragrostis_curvulaTVU2067463.440947.3118
g10851arabidopsis_hallerig10851.t178.922364.0254oryza_indicaBGIOSGA012113-PA79.047664.127
g10851arabidopsis_hallerig10851.t118.700514.4216vitis_viniferaVitvi00g04586_P00152.678640.625
g10851arabidopsis_hallerig10851.t113.470711.7274vitis_viniferaVitvi13g04678_P00182.524371.8447
g10851arabidopsis_hallerig10851.t110.61819.35024vitis_viniferaVitvi13g04387_P00191.780880.8219
g10851arabidopsis_hallerig10851.t185.736971.9493nicotiana_attenuataOIT0497686.837972.8732
g10851arabidopsis_hallerig10851.t184.310667.6704coffea_canephoraCDP1910384.98468.2109
g10851arabidopsis_hallerig10851.t182.091966.4025ipomoea_trilobaitb06g24570.t185.761669.3709
g10851arabidopsis_hallerig10851.t185.10367.3534ipomoea_trilobaitb02g17390.t185.782767.8914
g10851arabidopsis_hallerig10851.t179.873262.7575triticum_urartuTuG1812G0400002855.01.T0181.028963.6656
g10851arabidopsis_hallerig10851.t179.080864.0254oryza_meridionalisOMERI03G08000.179.206464.127
g10851arabidopsis_hallerig10851.t182.250467.8288prunus_aviumPav_sc0000358.1_g260.1.mk:mrna77.927964.2643
g10851arabidopsis_hallerig10851.t178.922364.0254oryza_sativaOs03t0214100-0179.047664.127
g10851arabidopsis_hallerig10851.t177.337664.8177pistacia_veracds-EVM0031426.184.869671.1304
g10851arabidopsis_hallerig10851.t113.312211.252pistacia_veracds-EVM0018188.182.352969.6078
g10851arabidopsis_hallerig10851.t128.684621.87pistacia_veracds-EVM0015451.164.642949.2857
g10851arabidopsis_hallerig10851.t113.470710.6181quercus_subercds-POF20576.174.561458.7719
g10851arabidopsis_hallerig10851.t184.944570.0475quercus_subercds-POF19172.185.350370.3822
g10851arabidopsis_hallerig10851.t117.115711.4105quercus_subercds-POE73917.158.064538.7097
g10851arabidopsis_hallerig10851.t113.312210.1426quercus_subercds-POE61212.186.597965.9794
g10851arabidopsis_hallerig10851.t143.264734.3899quercus_subercds-POF22047.176.901461.1268
g10851arabidopsis_hallerig10851.t182.091965.6101chenopodium_quinoaAUR62021554-RA:cds82.747666.1342
g10851arabidopsis_hallerig10851.t181.933466.7195chenopodium_quinoaAUR62008537-RA:cds82.587967.2524
g10851arabidopsis_hallerig10851.t180.982667.0365dioscorea_rotundataDRNTG_22276.184.602670.0331
g10851arabidopsis_hallerig10851.t183.518269.8891citrus_clementinaESR5400584.590770.7865
g10851arabidopsis_hallerig10851.t176.228264.0254juglans_regiacds.Jr02_07060_p184.534371.0018
g10851arabidopsis_hallerig10851.t185.4268.9382actinidia_chinensisPSR8911786.102269.4888
g10851arabidopsis_hallerig10851.t185.578468.4628actinidia_chinensisPSS0798486.26269.0096
g10851arabidopsis_hallerig10851.t179.080861.6482leersia_perrieriLPERR03G07550.173.274657.1219
g10851arabidopsis_hallerig10851.t179.873262.599aegilops_tauschiiAET4Gv20613200.266.932352.4568
g10851arabidopsis_hallerig10851.t180.824164.9762musa_acuminataMa04_p14340.180.568764.7709
g10851arabidopsis_hallerig10851.t164.659348.1775selaginella_moellendorffiiEFJ1744072.084853.7102
g10851arabidopsis_hallerig10851.t164.342347.7021selaginella_moellendorffiiEFJ3503471.731453.1802
g10851arabidopsis_hallerig10851.t177.654561.9651panicum_halliiPUZ4217979.934763.7847
g10851arabidopsis_hallerig10851.t194.294888.5895arabis_alpinaKFK2787895.289.44
g10851arabidopsis_hallerig10851.t185.736969.8891quercus_lobataQL10p019699:mrna86.146570.2229
g10851arabidopsis_hallerig10851.t195.404190.4913eutrema_salsugineumESQ3183096.3291.36
g10851arabidopsis_hallerig10851.t182.091966.0856kalanchoe_fedtschenkoiKaladp0018s0032.1.v1.181.703565.7729
g10851arabidopsis_hallerig10851.t180.031764.0254hordeum_vulgareHORVU.MOREX.r3.4HG0396660.181.189764.9518
g10851arabidopsis_hallerig10851.t114.738510.4596rosa_chinensisPRQ3112753.142937.7143
g10851arabidopsis_hallerig10851.t17.923936.6561rosa_chinensisPRQ3175679.365166.6667
g10851arabidopsis_hallerig10851.t178.922364.0254oryza_barthiiOBART03G08260.179.047664.127
g10851arabidopsis_hallerig10851.t163.074543.4231chara_brauniiGBG6175260.30341.5152
g10851arabidopsis_hallerig10851.t161.489751.981corymbia_citriodoracds-KAF8041574.184.531671.4597
g10851arabidopsis_hallerig10851.t183.676769.0967corymbia_citriodoracds-KAF8037400.181.481567.284
g10851arabidopsis_hallerig10851.t193.660988.2726brassica_rapa_ro18A09p007800.1_BraROA.194.863689.4061
g10851arabidopsis_hallerig10851.t191.125285.42brassica_rapa_ro18A03p050040.1_BraROA.194.417188.5057
g10851arabidopsis_hallerig10851.t184.469169.0967olea_europaeaOE9A048657C185.691370.0965
g10851arabidopsis_hallerig10851.t184.469168.4628olea_europaeaOE9A090710C485.416769.2308
g10851arabidopsis_hallerig10851.t147.543639.9366eucalyptus_grandisKCW8372987.719373.6842
g10851arabidopsis_hallerig10851.t183.676769.5721eucalyptus_grandisKCW8372281.481567.7469
g10851arabidopsis_hallerig10851.t195.087291.1252camelina_sativaCsa11g094840.155.401753.0933
g10851arabidopsis_hallerig10851.t153.565849.9208camelina_sativaCsa02g067970.157.777853.8462
g10851arabidopsis_hallerig10851.t195.087290.8082camelina_sativaCsa18g034380.156.764454.21
g10851arabidopsis_hallerig10851.t183.835268.7797daucus_carotaKZN0281384.775669.5513
g10851arabidopsis_hallerig10851.t165.451754.6751daucus_carotaKZN0281289.782675
g10851arabidopsis_hallerig10851.t182.884367.8288daucus_carotaKZM8946983.6868.48
g10851arabidopsis_hallerig10851.t136.925528.8431digitaria_exilisDexi9B01G0042240.1:cds76.897760.066
g10851arabidopsis_hallerig10851.t178.288461.6482digitaria_exilisDexi9A01G0043050.1:cds79.293762.4398
g10851arabidopsis_hallerig10851.t19.508727.13154digitaria_exilisDexi9B01G0042230.1:cds8060
g10851arabidopsis_hallerig10851.t179.873262.7575triticum_dicoccoidesTRIDC4AG007980.181.028963.6656
g10851arabidopsis_hallerig10851.t175.911359.7464triticum_dicoccoidesTRIDC4BG043080.376.762860.4167
g10851arabidopsis_hallerig10851.t199.366197.7813arabidopsis_lyratafgenesh2_kg.8__2070__AT5G61000.199.366197.7813
g10851arabidopsis_hallerig10851.t112.99529.50872saccharum_spontaneumSspon.01G0006260-2B-mRNA-1:cds79.611658.2524
g10851arabidopsis_hallerig10851.t177.81361.4897saccharum_spontaneumSspon.01G0006260-1P-mRNA-1:cds78.812262.2793
g10851arabidopsis_hallerig10851.t164.342351.1886saccharum_spontaneumSspon.01G0006260-1A-mRNA-1:cds76.603860.9434
g10851arabidopsis_hallerig10851.t177.81361.4897saccharum_spontaneumSspon.01G0006260-2P-mRNA-1:cds78.812262.2793
g10851arabidopsis_hallerig10851.t124.405719.1759saccharum_spontaneumSspon.01G0008070-1A-mRNA-162.348248.9879
g10851arabidopsis_hallerig10851.t179.397864.6593nymphaea_colorataNC7G0300820.1:cds80.1665.28
g10851arabidopsis_hallerig10851.t178.288462.4406echinochloa_crusgalliscaffold42.538.cds79.677463.5484
g10851arabidopsis_hallerig10851.t178.288462.4406echinochloa_crusgalliscaffold9.264.cds79.549163.4461
g10851arabidopsis_hallerig10851.t178.288461.8067echinochloa_crusgalliscaffold97.434.cds79.806163.0048
g10851arabidopsis_hallerig10851.t181.616576.7036brassica_oleraceaBo7g098280.148.676845.7467
g10851arabidopsis_hallerig10851.t193.660988.2726brassica_oleraceaBo9g014440.195.016189.5498
g10851arabidopsis_hallerig10851.t184.152168.6212corchorus_capsularisOMO5314484.9669.28
g10851arabidopsis_hallerig10851.t178.922364.0254oryza_nivaraONIVA03G09120.179.047664.127
g10851arabidopsis_hallerig10851.t111.72749.03328trifolium_pratenseTp57577_TGAC_v2_mRNA2071771.153854.8077
g10851arabidopsis_hallerig10851.t123.613319.0174cynara_cardunculusKVI0637082.320466.2983
g10851arabidopsis_hallerig10851.t110.77658.55785cynara_cardunculusKVH8973478.160962.069
g10851arabidopsis_hallerig10851.t117.115712.3613cynara_cardunculusKVI0636969.230850
g10851arabidopsis_hallerig10851.t120.443715.8479cynara_cardunculusKVH8836064.824150.2513

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression