| RBP Type |
N.A. |
| Diseases |
|
| Drug |
|
| Main interacting RNAs |
|
| Moonlighting functions |
|
| Localizations |
|
|
BulkPerturb-seq
|
|
| Ensembl ID | g06835 | Gene ID |
|
Accession |
- |
| Symbol |
|
Alias |
- |
Full Name |
NA |
| Status |
Confidence |
Length |
2328 bases |
Strand |
Minus strand |
| Position |
FJVB01000012.1 : 1465209 - 1467536 |
RNA binding domain |
2OG-FeII_Oxy_2 |
| Summary |
N.A. |
RNA binding domains (RBDs)
| Protein |
Domain |
Pfam ID |
E-value |
Domain number |
| g06835 |
2OG-FeII_Oxy_2 |
PF13532 |
3.2e-46 |
1 |
RNA binding proteomes (RBPomes)
| Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
| Pubmed ID |
Title |
Author |
Time |
Journal |
| Name |
Transcript ID |
bp |
Protein |
Translation ID |
| - |
g06835.t1 |
2008 |
464aa |
g06835.t1 |
| Pathway ID |
Pathway Name |
Source |
| | |
| ensgID |
Trait |
pValue |
Pubmed ID |
| ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
|---|
Protein-Protein Interaction (PPI)
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| g06835 | arabidopsis_halleri | g04904.t1 | 29.9712 | 19.0202 | arabidopsis_halleri | g06835.t1 | 22.4138 | 14.2241 |
| Ensembl ID |
Source |
Target |
| Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.8448 | 30.3879 | chlamydomonas_reinhardtii | PNW79362 | 17.4941 | 11.1111 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.4138 | 34.9138 | papaver_somniferum | RZC82503 | 47.8261 | 35.2174 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.1983 | 35.1293 | papaver_somniferum | RZC78183 | 48.7751 | 36.3029 |
| g06835 | arabidopsis_halleri | g06835.t1 | 55.3879 | 42.2414 | cannabis_sativa_female | cds.novel_model_1837_5bd9a17a.1.5bd9b136 | 41.3849 | 31.562 |
| g06835 | arabidopsis_halleri | g06835.t1 | 48.4914 | 32.7586 | physcomitrium_patens | Pp3c16_188V3.2 | 30.6122 | 20.6803 |
| g06835 | arabidopsis_halleri | g06835.t1 | 48.4914 | 32.7586 | physcomitrium_patens | Pp3c16_180V3.1 | 30.6122 | 20.6803 |
| g06835 | arabidopsis_halleri | g06835.t1 | 39.4397 | 29.9569 | ficus_carica | FCD_00005737-RA:cds | 31.2821 | 23.7607 |
| g06835 | arabidopsis_halleri | g06835.t1 | 48.0603 | 37.931 | ficus_carica | FCD_00005736-RA:cds | 50.4525 | 39.819 |
| g06835 | arabidopsis_halleri | g06835.t1 | 51.7241 | 38.3621 | beta_vulgaris | KMT04786 | 41.0959 | 30.4795 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.0948 | 40.0862 | citrullus_lanatus | Cla97C07G140920.1 | 44.0351 | 32.6316 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.7414 | 41.5948 | cucumis_sativus | KGN58499 | 47.5655 | 36.1423 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.6638 | 42.2414 | theobroma_cacao | EOY27333 | 54.013 | 42.5163 |
| g06835 | arabidopsis_halleri | g06835.t1 | 89.4397 | 83.4052 | arabidopsis_thaliana | AT3G14160.1 | 91.2088 | 85.0549 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.5259 | 41.1638 | cucumis_melo | MELO3C025799.2.1 | 50.3984 | 38.0478 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.8793 | 39.8707 | populus_trichocarpa | Potri.003G070100.1.v4.1 | 50.7099 | 37.5254 |
| g06835 | arabidopsis_halleri | g06835.t1 | 76.7241 | 67.2414 | brassica_juncea | cds.BjuB01g08470S | 79.6421 | 69.7987 |
| g06835 | arabidopsis_halleri | g06835.t1 | 74.1379 | 63.7931 | brassica_juncea | cds.BjuA05g30510S | 78.7185 | 67.7346 |
| g06835 | arabidopsis_halleri | g06835.t1 | 77.5862 | 66.5948 | brassica_napus | CDX97547 | 79.2952 | 68.0617 |
| g06835 | arabidopsis_halleri | g06835.t1 | 73.9224 | 64.4397 | brassica_napus | CDY52267 | 80.5164 | 70.1878 |
| g06835 | arabidopsis_halleri | g06835.t1 | 55.1724 | 41.3793 | malus_domestica_golden | mRNA:MD09G0154900 | 53.3333 | 40 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.6293 | 31.0345 | marchantia_polymorpha | PTQ36973 | 29.9864 | 19.5387 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.0948 | 40.7328 | prunus_dulcis | VVA20704 | 52.8421 | 39.7895 |
| g06835 | arabidopsis_halleri | g06835.t1 | 55.1724 | 41.1638 | prunus_persica | ONI15304 | 48.1203 | 35.9023 |
| g06835 | arabidopsis_halleri | g06835.t1 | 37.7155 | 30.3879 | cajanus_cajan | C.cajan_11002.t.cds1 | 82.9384 | 66.8246 |
| g06835 | arabidopsis_halleri | g06835.t1 | 44.6121 | 33.4052 | glycine_max | KRG89919 | 66.5595 | 49.8392 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.2586 | 34.0517 | glycine_max | KRG97293 | 67.0927 | 50.4792 |
| g06835 | arabidopsis_halleri | g06835.t1 | 50.8621 | 39.4397 | lupinus_angustifolius | OIW17535 | 63.9566 | 49.5935 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.9828 | 37.069 | phaseolus_vulgaris | ESW11066 | 63.3721 | 50 |
| g06835 | arabidopsis_halleri | g06835.t1 | 44.181 | 34.6983 | pisum_sativum | Psat1g115360.1.cds | 62.31 | 48.9362 |
| g06835 | arabidopsis_halleri | g06835.t1 | 25.8621 | 20.9052 | pisum_sativum | Psat5g189880.1.cds1 | 70.5882 | 57.0588 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.5517 | 37.5 | vigna_unguiculata | Vigun09g000900.1.v1.2 | 61.5385 | 49.5727 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.9828 | 37.2845 | vigna_angularis | KOM29090 | 63.3721 | 50.2907 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.3103 | 41.5948 | manihot_esculenta | OAY36369 | 45.2424 | 34.6499 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.8448 | 38.7931 | sesamum_indicum | SIN_1015434.t | 54.5455 | 44.226 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.8448 | 36.4224 | helianthus_annuus | mRNA:HanXRQr2_Chr01g0043001 | 55.0868 | 41.9355 |
| g06835 | arabidopsis_halleri | g06835.t1 | 27.1552 | 21.9828 | helianthus_annuus | mRNA:HanXRQr2_Chr01g0043081 | 68.4783 | 55.4348 |
| g06835 | arabidopsis_halleri | g06835.t1 | 38.1466 | 28.0172 | lolium_perenne | cds.KYUSt_chr4.5148 | 51.0086 | 37.464 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.1983 | 35.9914 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.7Cg0000358.1 | 48.8839 | 37.2768 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.7672 | 37.069 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.4Ag0001910.1 | 55.0761 | 43.6548 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.7672 | 37.069 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.4Dg0002266.1 | 52.4155 | 41.5459 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.1983 | 35.9914 | avena_sativa_sang | AVESA.00010b.r2.7CG0710250.1.CDS | 52.518 | 40.048 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.7672 | 37.069 | avena_sativa_sang | AVESA.00010b.r2.4AG0615020.1.CDS | 56.9554 | 45.1444 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.9828 | 37.2845 | avena_sativa_sang | AVESA.00010b.r2.4DG0758510.1.CDS | 57.2178 | 45.4068 |
| g06835 | arabidopsis_halleri | g06835.t1 | 15.3017 | 13.3621 | oryza_longistaminata | AMDW01032067.1_FGP001 | 78.022 | 68.1319 |
| g06835 | arabidopsis_halleri | g06835.t1 | 27.8017 | 21.7672 | oryza_longistaminata | KN538803.1_FGP005 | 50.9881 | 39.9209 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.2586 | 34.4828 | oryza_rufipogon | ORUFI03G40430.1 | 56.6038 | 43.1267 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.0431 | 34.4828 | oryza_punctata | OPUNC03G35860.1 | 56.6396 | 43.3604 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.2586 | 34.4828 | oryza_glaberrima | ORGLA03G0355200.1 | 40.2299 | 30.6513 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.3362 | 36.2069 | secale_cereale | SECCE5Rv1G0363860.1 | 53.0864 | 41.4815 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.0431 | 35.5603 | setaria_viridis | TKV90556 | 60.0575 | 47.4138 |
| g06835 | arabidopsis_halleri | g06835.t1 | 44.6121 | 35.1293 | sorghum_bicolor | EER93210 | 54.3307 | 42.7822 |
| g06835 | arabidopsis_halleri | g06835.t1 | 44.8276 | 35.5603 | setaria_italica | KQK86473 | 59.7701 | 47.4138 |
| g06835 | arabidopsis_halleri | g06835.t1 | 48.9224 | 37.5 | triticum_aestivum | TraesCS5D02G482900.1 | 45.1292 | 34.5924 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.4138 | 37.7155 | triticum_aestivum | TraesCS5B02G482500.1 | 55.8376 | 44.4162 |
| g06835 | arabidopsis_halleri | g06835.t1 | 49.569 | 38.7931 | triticum_aestivum | TraesCS5A02G470000.1 | 49.8915 | 39.0456 |
| g06835 | arabidopsis_halleri | g06835.t1 | 43.9655 | 35.3448 | zea_mays | Zm00001eb212020_P001 | 59.1304 | 47.5362 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.1207 | 35.3448 | ananas_comosus | Aco012513.1.mrna1 | 49.652 | 38.051 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.7672 | 35.1293 | asparagus_officinalis | ONK62473 | 57.7128 | 43.3511 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.4138 | 37.7155 | triticum_turgidum | TRITD5Bv1G229160.1 | 55.8376 | 44.4162 |
| g06835 | arabidopsis_halleri | g06835.t1 | 49.569 | 38.7931 | triticum_turgidum | TRITD5Av1G229810.3 | 49.8915 | 39.0456 |
| g06835 | arabidopsis_halleri | g06835.t1 | 21.5517 | 13.1466 | caenorhabditis_elegans | Y51H7C.5.1 | 27.8552 | 16.9916 |
| g06835 | arabidopsis_halleri | g06835.t1 | 42.8879 | 33.1897 | amborella_trichopoda | ERN05375 | 49.5025 | 38.3085 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.4483 | 40.9483 | corylus_avellana | Cav07g11570.t1 | 42.1769 | 32.3129 |
| g06835 | arabidopsis_halleri | g06835.t1 | 52.3707 | 42.2414 | gossypium_raimondii | KJB68207 | 57.0423 | 46.0094 |
| g06835 | arabidopsis_halleri | g06835.t1 | 44.181 | 32.9741 | brachypodium_distachyon | PNT73911 | 66.5584 | 49.6753 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.6638 | 42.2414 | fraxinus_excelsior | FRAEX38873_v2_000181070.1.cds | 55.2106 | 43.459 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.2586 | 34.4828 | oryza_glumipatula | OGLUM03G38600.3 | 56.9106 | 43.3604 |
| g06835 | arabidopsis_halleri | g06835.t1 | 40.9483 | 33.4052 | eragrostis_curvula | TVU44438 | 62.9139 | 51.3245 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.0431 | 34.0517 | oryza_indica | BGIOSGA013818-PA | 56.6396 | 42.8184 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.6638 | 40.0862 | vitis_vinifera | Vitvi09g00056_P001 | 54.4858 | 40.7002 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.0172 | 38.1466 | coffea_canephora | CDO97817 | 52.2293 | 37.5796 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.7414 | 38.7931 | ipomoea_triloba | itb06g16800.t1 | 46.6055 | 33.0275 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.0431 | 34.6983 | triticum_urartu | TuG1812S0000599200.01.T01 | 52.5126 | 40.4523 |
| g06835 | arabidopsis_halleri | g06835.t1 | 27.1552 | 21.5517 | triticum_urartu | TuG1812S0000599600.01.T01 | 35 | 27.7778 |
| g06835 | arabidopsis_halleri | g06835.t1 | 55.6034 | 41.8103 | prunus_avium | Pav_sc0001105.1_g070.1.mk:mrna | 52.6531 | 39.5918 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.2586 | 34.4828 | oryza_sativa | Os03t0816500-02 | 56.6038 | 43.1267 |
| g06835 | arabidopsis_halleri | g06835.t1 | 56.4655 | 42.0259 | pistacia_vera | cds-EVM0023742.2 | 46.8694 | 34.8837 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.2328 | 39.0086 | quercus_suber | cds-POF24582.1 | 43.8721 | 32.1492 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.8793 | 41.3793 | quercus_suber | cds-POE49818.1 | 44.6429 | 34.2857 |
| g06835 | arabidopsis_halleri | g06835.t1 | 37.5 | 30.1724 | dioscorea_rotundata | DRNTG_04009.1 | 76.3158 | 61.4035 |
| g06835 | arabidopsis_halleri | g06835.t1 | 23.4914 | 17.2414 | dioscorea_rotundata | DRNTG_34275.1 | 71.7105 | 52.6316 |
| g06835 | arabidopsis_halleri | g06835.t1 | 43.5345 | 35.9914 | citrus_clementina | ESR39990 | 68.7075 | 56.8027 |
| g06835 | arabidopsis_halleri | g06835.t1 | 53.4483 | 39.2241 | juglans_regia | cds.Jr12_16940_p1 | 52.766 | 38.7234 |
| g06835 | arabidopsis_halleri | g06835.t1 | 52.8017 | 40.3017 | actinidia_chinensis | PSR96213 | 50.308 | 38.3984 |
| g06835 | arabidopsis_halleri | g06835.t1 | 44.181 | 33.4052 | leersia_perrieri | LPERR03G32970.1 | 57.1031 | 43.1755 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.7672 | 35.1293 | aegilops_tauschii | AET5Gv21090100.3 | 33.1298 | 24.8855 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.1207 | 35.1293 | aegilops_tauschii | AET5Gv21090400.1 | 48.8584 | 37.2146 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.8448 | 35.3448 | musa_acuminata | Ma09_p04690.1 | 53.8835 | 39.8058 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.0431 | 35.1293 | panicum_hallii | PUZ36385 | 60.4046 | 47.1098 |
| g06835 | arabidopsis_halleri | g06835.t1 | 78.6638 | 69.181 | arabis_alpina | KFK38773 | 78.3262 | 68.8841 |
| g06835 | arabidopsis_halleri | g06835.t1 | 52.1552 | 38.1466 | quercus_lobata | QL05p002051:mrna | 44.8148 | 32.7778 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.7414 | 41.1638 | quercus_lobata | QL05p003212:mrna | 45.6835 | 34.3525 |
| g06835 | arabidopsis_halleri | g06835.t1 | 78.4483 | 70.4741 | eutrema_salsugineum | ESQ48573 | 80 | 71.8681 |
| g06835 | arabidopsis_halleri | g06835.t1 | 55.6034 | 43.1034 | kalanchoe_fedtschenkoi | Kaladp0011s0420.1.v1.1 | 54.7771 | 42.4628 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.6293 | 37.069 | hordeum_vulgare | HORVU.MOREX.r3.5HG0524840.1 | 42.3372 | 32.9502 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.6897 | 35.9914 | rosa_chinensis | PRQ51631 | 66.877 | 52.6814 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.2586 | 34.4828 | oryza_barthii | OBART03G38790.1 | 56.9106 | 43.3604 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.9828 | 33.4052 | chara_braunii | GBG71408 | 24.3304 | 17.2991 |
| g06835 | arabidopsis_halleri | g06835.t1 | 52.3707 | 39.6552 | corymbia_citriodora | cds-KAF8011290.1 | 65.3226 | 49.4624 |
| g06835 | arabidopsis_halleri | g06835.t1 | 74.1379 | 63.7931 | brassica_rapa_ro18 | A05p045250.1_BraROA.1 | 78.7185 | 67.7346 |
| g06835 | arabidopsis_halleri | g06835.t1 | 54.0948 | 43.1034 | olea_europaea | OE9A067120C2 | 52.183 | 41.58 |
| g06835 | arabidopsis_halleri | g06835.t1 | 50.8621 | 39.4397 | eucalyptus_grandis | KCW53385 | 62.2691 | 48.285 |
| g06835 | arabidopsis_halleri | g06835.t1 | 86.4224 | 76.2931 | camelina_sativa | Csa15g018450.1 | 74.6741 | 65.9218 |
| g06835 | arabidopsis_halleri | g06835.t1 | 84.4828 | 75 | camelina_sativa | Csa19g020750.1 | 49.3082 | 43.7736 |
| g06835 | arabidopsis_halleri | g06835.t1 | 80.3879 | 70.9052 | camelina_sativa | Csa01g016660.1 | 70.2448 | 61.9586 |
| g06835 | arabidopsis_halleri | g06835.t1 | 46.5517 | 35.9914 | daucus_carota | KZM89352 | 56.9921 | 44.0633 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.2586 | 36.2069 | digitaria_exilis | Dexi9B01G0003420.1:cds | 61.0465 | 48.8372 |
| g06835 | arabidopsis_halleri | g06835.t1 | 43.5345 | 35.3448 | eragrostis_tef | Et_4A_034166.CDS | 59.0643 | 47.9532 |
| g06835 | arabidopsis_halleri | g06835.t1 | 41.8103 | 33.6207 | eragrostis_tef | Et_4B_038312.CDS | 61.7834 | 49.6815 |
| g06835 | arabidopsis_halleri | g06835.t1 | 48.0603 | 37.2845 | triticum_dicoccoides | TRIDC5AG067200.1 | 50.5669 | 39.229 |
| g06835 | arabidopsis_halleri | g06835.t1 | 27.1552 | 21.5517 | triticum_dicoccoides | TRIDC5AG067190.2 | 28.833 | 22.8833 |
| g06835 | arabidopsis_halleri | g06835.t1 | 47.1983 | 37.7155 | triticum_dicoccoides | TRIDC5BG072370.1 | 50.1144 | 40.0458 |
| g06835 | arabidopsis_halleri | g06835.t1 | 65.5172 | 64.0086 | arabidopsis_lyrata | fgenesh2_kg.3__1530__AT3G14160.1 | 97.7492 | 95.4984 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.4741 | 33.4052 | nymphaea_colorata | NC2G0001850.1:cds | 50.1188 | 36.8171 |
| g06835 | arabidopsis_halleri | g06835.t1 | 31.0345 | 23.9224 | nymphaea_colorata | NC2G0055590.1:cds | 69.5652 | 53.6232 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.4741 | 35.7759 | echinochloa_crusgalli | scaffold3.683.cds | 60.9827 | 47.9769 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.4741 | 35.5603 | echinochloa_crusgalli | scaffold176.218.cds | 60.8069 | 47.5504 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.6897 | 35.9914 | echinochloa_crusgalli | scaffold65.299.cds | 61.2717 | 48.2659 |
| g06835 | arabidopsis_halleri | g06835.t1 | 75.2155 | 65.3017 | brassica_oleracea | Bo5g131680.1 | 80.0459 | 69.4954 |
| g06835 | arabidopsis_halleri | g06835.t1 | 51.5086 | 38.7931 | corchorus_capsularis | OMO70560 | 60.3535 | 45.4545 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.0431 | 34.0517 | oryza_nivara | ONIVA03G40420.1 | 56.3342 | 42.5876 |
| g06835 | arabidopsis_halleri | g06835.t1 | 43.9655 | 36.4224 | trifolium_pratense | Tp57577_TGAC_v2_mRNA28662 | 65.8064 | 54.5161 |
| g06835 | arabidopsis_halleri | g06835.t1 | 45.0431 | 31.4655 | cynara_cardunculus | KVH99880 | 48.3796 | 33.7963 |
| Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |
