RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | g02544 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
NA |
Status |
Confidence |
Length |
1586 bases |
Strand |
Minus strand |
Position |
FJVB01000004.1 : 320253 - 321838 |
RNA binding domain |
RRM_1 , Nup35_RRM_2 |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
g02544 |
RRM_1 |
PF00076 |
9.6e-13 |
1 |
g02544 |
Nup35_RRM_2 |
PF14605 |
3.1e-15 |
2 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
g02544.t1 |
991 |
245aa |
g02544.t1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g02544 | arabidopsis_halleri | g20594.t1 | 86.6953 | 80.6867 | arabidopsis_halleri | g02544.t1 | 82.449 | 76.7347 |
g02544 | arabidopsis_halleri | g17723.t1 | 60 | 48.6792 | arabidopsis_halleri | g02544.t1 | 64.898 | 52.6531 |
g02544 | arabidopsis_halleri | g19377.t1 | 52.5926 | 35.5556 | arabidopsis_halleri | g02544.t1 | 28.9796 | 19.5918 |
g02544 | arabidopsis_halleri | g15850.t1 | 22.1402 | 15.4982 | arabidopsis_halleri | g02544.t1 | 48.9796 | 34.2857 |
g02544 | arabidopsis_halleri | g29052.t1 | 56.1947 | 38.9381 | arabidopsis_halleri | g02544.t1 | 51.8367 | 35.9184 |
g02544 | arabidopsis_halleri | g15854.t1 | 53.8889 | 38.8889 | arabidopsis_halleri | g02544.t1 | 39.5918 | 28.5714 |
g02544 | arabidopsis_halleri | g15852.t1 | 47.5806 | 33.4677 | arabidopsis_halleri | g02544.t1 | 48.1633 | 33.8776 |
g02544 | arabidopsis_halleri | g09489.t1 | 47.8814 | 36.0169 | arabidopsis_halleri | g02544.t1 | 46.1224 | 34.6939 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g02544 | arabidopsis_halleri | g02544.t1 | 60.4082 | 47.3469 | camelina_sativa | Csa19g002910.1 | 37.7551 | 29.5918 |
g02544 | arabidopsis_halleri | g02544.t1 | 64.4898 | 51.8367 | camelina_sativa | Csa15g001900.1 | 62.6984 | 50.3968 |
g02544 | arabidopsis_halleri | g02544.t1 | 62.8571 | 52.6531 | camelina_sativa | Csa01g001820.1 | 68.1416 | 57.0796 |
g02544 | arabidopsis_halleri | g02544.t1 | 35.9184 | 30.2041 | camelina_sativa | Csa19g002980.1 | 68.2171 | 57.3643 |
g02544 | arabidopsis_halleri | g02544.t1 | 69.7959 | 56.3265 | camelina_sativa | Csa15g001830.1 | 69.2308 | 55.8704 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |