Description

Ensembl ID g02544 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 1586 bases Strand Minus strand
Position FJVB01000004.1 : 320253 - 321838 RNA binding domain RRM_1 , Nup35_RRM_2
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g02544 RRM_1 PF00076 9.6e-13 1
g02544 Nup35_RRM_2 PF14605 3.1e-15 2

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g02544.t1 991 245aa g02544.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g02544arabidopsis_hallerig20594.t186.695380.6867arabidopsis_hallerig02544.t182.44976.7347
g02544arabidopsis_hallerig17723.t16048.6792arabidopsis_hallerig02544.t164.89852.6531
g02544arabidopsis_hallerig19377.t152.592635.5556arabidopsis_hallerig02544.t128.979619.5918
g02544arabidopsis_hallerig15850.t122.140215.4982arabidopsis_hallerig02544.t148.979634.2857
g02544arabidopsis_hallerig29052.t156.194738.9381arabidopsis_hallerig02544.t151.836735.9184
g02544arabidopsis_hallerig15854.t153.888938.8889arabidopsis_hallerig02544.t139.591828.5714
g02544arabidopsis_hallerig15852.t147.580633.4677arabidopsis_hallerig02544.t148.163333.8776
g02544arabidopsis_hallerig09489.t147.881436.0169arabidopsis_hallerig02544.t146.122434.6939

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g02544arabidopsis_hallerig02544.t160.408247.3469camelina_sativaCsa19g002910.137.755129.5918
g02544arabidopsis_hallerig02544.t164.489851.8367camelina_sativaCsa15g001900.162.698450.3968
g02544arabidopsis_hallerig02544.t162.857152.6531camelina_sativaCsa01g001820.168.141657.0796
g02544arabidopsis_hallerig02544.t135.918430.2041camelina_sativaCsa19g002980.168.217157.3643
g02544arabidopsis_hallerig02544.t169.795956.3265camelina_sativaCsa15g001830.169.230855.8704

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression