RBP Type |
N.A. |
Diseases |
|
Drug |
|
Main interacting RNAs |
|
Moonlighting functions |
|
Localizations |
|
BulkPerturb-seq
|
|
Ensembl ID | g02367 | Gene ID |
|
Accession |
- |
Symbol |
|
Alias |
- |
Full Name |
CST complex subunit STN1 |
Status |
Confidence |
Length |
2462 bases |
Strand |
Plus strand |
Position |
FJVB01000003.1 : 2966723 - 2969184 |
RNA binding domain |
tRNA_anti-codon |
Summary |
N.A. |
RNA binding domains (RBDs)
Protein |
Domain |
Pfam ID |
E-value |
Domain number |
g02367 |
tRNA_anti-codon |
PF01336 |
6.5e-12 |
1 |
RNA binding proteomes (RBPomes)
Pubmed ID |
Full Name |
Cell |
Author |
Time |
Doi |
Literatures on RNA binding capacity
Pubmed ID |
Title |
Author |
Time |
Journal |
Name |
Transcript ID |
bp |
Protein |
Translation ID |
- |
g02367.t1 |
977 |
158aa |
g02367.t1.cds1 |
Pathway ID |
Pathway Name |
Source |
| | |
ensgID |
Trait |
pValue |
Pubmed ID |
ensgID | SNP | Chromosome | Position |
Trait | PubmedID | Or or BEAT |
EFO ID |
Protein-Protein Interaction (PPI)
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g02367 | arabidopsis_halleri | g08851.t1 | 22.6619 | 13.3094 | arabidopsis_halleri | g02367.t1.cds1 | 39.8734 | 23.4177 |
g02367 | arabidopsis_halleri | g02469.t1 | 21.5827 | 12.5899 | arabidopsis_halleri | g02367.t1.cds1 | 37.9747 | 22.1519 |
Ensembl ID |
Source |
Target |
Species |
Protein ID |
Perc_pos |
Perc_id |
Species |
Protein ID |
Perc_pos |
Perc_id |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 74.0506 | 51.2658 | papaver_somniferum | RZC80674 | 69.6429 | 48.2143 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 73.4177 | 51.2658 | papaver_somniferum | RZC50935 | 59.1837 | 41.3265 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 74.0506 | 56.3291 | cannabis_sativa_female | cds.evm.model.01.958 | 73.5849 | 55.9748 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 53.7975 | 34.1772 | physcomitrium_patens | Pp3c1_6180V3.4 | 37.7778 | 24 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 94.9367 | 91.1392 | arabidopsis_thaliana | AT1G07130.1 | 93.75 | 90 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 72.1519 | 56.3291 | populus_trichocarpa | Potri.005G212900.2.v4.1 | 68.6747 | 53.6145 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 86.076 | 75.3165 | brassica_juncea | cds.BjuB03g57530S | 86.076 | 75.3165 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 83.5443 | 74.6835 | brassica_juncea | cds.BjuA08g29840S | 83.5443 | 74.6835 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 82.9114 | 75.3165 | brassica_napus | CDX86499 | 82.9114 | 75.3165 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 83.5443 | 74.6835 | brassica_napus | CDY15601 | 83.5443 | 74.6835 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 74.6835 | 58.2278 | malus_domestica_golden | CDS:MD03G0213700.1 | 71.5152 | 55.7576 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 53.7975 | 34.8101 | marchantia_polymorpha | PTQ40262 | 48.5714 | 31.4286 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 60.7595 | 46.2025 | glycine_max | KRH43863 | 52.459 | 39.8907 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 67.7215 | 49.3671 | lupinus_angustifolius | OIW01902 | 62.9412 | 45.8824 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 67.7215 | 49.3671 | medicago_truncatula | KEH40681 | 59.7765 | 43.5754 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 67.0886 | 48.7342 | medicago_truncatula | AES94977 | 57.2973 | 41.6216 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 65.1899 | 47.4684 | pisum_sativum | Psat6g050280.1.cds1 | 58.8571 | 42.8571 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 69.6203 | 51.2658 | pisum_sativum | Psat6g025560.1.cds1 | 64.3275 | 47.3684 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 69.6203 | 51.2658 | capsicum_annuum | PHT94820 | 67.0732 | 49.3902 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 68.9873 | 50.6329 | solanum_lycopersicum | Solyc01g088130.2.1.1 | 66.4634 | 48.7805 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 73.4177 | 54.4304 | sesamum_indicum | SIN_1012394.t.cds1 | 70.7317 | 52.439 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 66.4557 | 51.2658 | lactuca_sativa | cds-PLY71624.1 | 61.7647 | 47.6471 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 57.5949 | 45.5696 | lolium_perenne | cds.KYUSt_chr2.9466 | 51.4124 | 40.678 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 43.038 | avena_sativa_ot3098 | cds.AVESA.00001b.r3.5Ag0000838.1 | 55.9748 | 42.7673 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 57.5949 | 44.3038 | avena_sativa_sang | AVESA.00010b.r2.4CG1314850.1.CDS | 54.1667 | 41.6667 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 43.038 | avena_sativa_sang | AVESA.00010b.r2.5AG0809660.1.CDS.1 | 55.9748 | 42.7673 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 51.2658 | 40.5063 | oryza_longistaminata | KN539251.1_FGP010 | 19.9507 | 15.7635 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.6962 | 41.7722 | oryza_brachyantha | OB03G27920.1 | 55 | 41.25 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 51.8987 | 41.1392 | oryza_punctata | OPUNC03G17660.1 | 39.0476 | 30.9524 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 41.7722 | oryza_glaberrima | ORGLA03G0174700.1 | 55.625 | 41.25 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.3038 | secale_cereale | SECCE6Rv1G0430080.1.CDS.1 | 57.6923 | 44.8718 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 44.9367 | secale_cereale | SECCE6Rv1G0430120.1.CDS.1 | 57.0513 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 43.6709 | secale_cereale | SECCE6Rv1G0430170.1.CDS.1 | 57.0513 | 44.2308 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 58.2278 | 43.038 | setaria_viridis | TKV95939 | 47.9167 | 35.4167 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 60.7595 | 44.9367 | sorghum_bicolor | EER92221 | 58.5366 | 43.2927 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 58.2278 | 43.6709 | setaria_italica | KQK90761 | 56.4417 | 42.3313 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.6962 | 46.2025 | triticum_aestivum | TraesCS3A02G485900.1 | 25.8824 | 21.4706 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 57.5949 | 44.9367 | triticum_aestivum | TraesCS3D02G481300.1.cds1 | 58.3333 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.6962 | 43.6709 | triticum_aestivum | TraesCS3B02G533300.1.cds1 | 56.4103 | 44.2308 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.9367 | triticum_aestivum | TraesCS3A02G485700.1.cds1 | 57.6923 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 44.9367 | triticum_aestivum | TraesCS3A02G486100.1.cds1 | 57.0513 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.9367 | triticum_aestivum | TraesCS3D02G481600.1.cds1 | 57.6923 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 54.4304 | 43.6709 | triticum_aestivum | TraesCS3B02G534200.1.cds1 | 55.1282 | 44.2308 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 43.6709 | triticum_aestivum | TraesCS3B02G533600.1.cds1 | 57.0513 | 44.2308 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 60.7595 | 45.5696 | zea_mays | Zm00001eb394240_P001 | 58.1818 | 43.6364 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 61.3924 | 46.2025 | ananas_comosus | Aco017164.1.mrna1.cds1 | 59.1463 | 44.5122 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.0633 | 44.3038 | triticum_turgidum | TRITD0Uv1G113850.1 | 55.7692 | 44.8718 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.9367 | triticum_turgidum | TRITD3Av1G266140.1 | 57.6923 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.6962 | 45.5696 | triticum_turgidum | TRITD3Av1G266090.2 | 25.8824 | 21.1765 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.9367 | triticum_turgidum | TRITD3Av1G266070.1 | 57.6923 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 43.6709 | triticum_turgidum | TRITD3Bv1G260280.1 | 57.0513 | 44.2308 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.0633 | 44.3038 | triticum_turgidum | TRITD0Uv1G026030.1 | 55.7692 | 44.8718 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.0633 | 44.3038 | triticum_turgidum | TRITD0Uv1G123370.1 | 55.7692 | 44.8718 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 74.6835 | 55.6962 | corylus_avellana | Cav04g01050.t1.cds1 | 70.6587 | 52.6946 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 72.7848 | 60.1266 | corylus_avellana | Cav02g11530.t1.cds1 | 68.8623 | 56.8862 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 41.7722 | brachypodium_distachyon | KQK21568 | 55.9748 | 41.5094 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 42.4051 | 27.8481 | homo_sapiens | ENSP00000224950 | 18.2065 | 11.9565 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 71.519 | 52.5316 | fraxinus_excelsior | FRAEX38873_v2_000180150.1.cds1 | 70.1863 | 51.5528 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 55.0633 | 41.1392 | oryza_indica | BGIOSGA010670-PA | 26.6055 | 19.8777 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 69.6203 | 51.8987 | nicotiana_attenuata | OIS97485 | 67.0732 | 50 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 73.4177 | 55.6962 | coffea_canephora | CDP03658 | 75.3247 | 57.1429 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.9367 | triticum_urartu | TuG1812G0300005276.01.T01.cds263480 | 57.6923 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.3038 | triticum_urartu | TuG1812G0300005275.01.T01 | 41.6667 | 32.4074 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.9367 | triticum_urartu | TuG1812S0002315200.01.T01.s_cds45302 | 57.6923 | 45.5128 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 51.8987 | 39.8734 | oryza_meridionalis | OMERI03G16650.1 | 46.5909 | 35.7955 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 41.7722 | oryza_sativa | Os03t0366900-01 | 55.625 | 41.25 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 46.8354 | 32.2785 | dioscorea_rotundata | DRNTG_21650.1.cds1 | 59.6774 | 41.129 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 69.6203 | 57.5949 | citrus_clementina | ESR57269 | 68.75 | 56.875 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 53.7975 | 41.7722 | leersia_perrieri | LPERR03G16020.1 | 41.2621 | 32.0388 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 60.1266 | 43.038 | musa_acuminata | Ma04_p35300.2 | 64.6258 | 46.2585 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 90.5063 | 84.8101 | eutrema_salsugineum | ESQ36194 | 90.5063 | 84.8101 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 70.2532 | 56.962 | kalanchoe_fedtschenkoi | Kaladp0040s0043.1.v1.1.CDS.1 | 70.7006 | 57.3248 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.3291 | 44.3038 | hordeum_vulgare | HORVU.MOREX.r3.3HG0229410.1.CDS1 | 55.9748 | 44.0252 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 56.962 | 44.3038 | hordeum_vulgare | HORVU.MOREX.r3.3HG0319520.1.CDS1 | 57.6923 | 44.8718 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 74.0506 | 58.2278 | rosa_chinensis | PRQ26055 | 60.6218 | 47.6684 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 51.2658 | 40.5063 | oryza_barthii | OBART03G18440.1 | 41.3265 | 32.6531 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 70.8861 | 53.1646 | corymbia_citriodora | cds-KAF8010828.1 | 70.4403 | 52.8302 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 71.519 | 54.4304 | corymbia_citriodora | cds-KAF7848256.1 | 71.0692 | 54.0881 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 83.5443 | 74.6835 | brassica_rapa_ro18 | A08p044480.1_BraROA.1.cds1 | 83.5443 | 74.6835 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 71.519 | 53.1646 | olea_europaea | OE9A027927C1 | 70.1863 | 52.1739 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 71.519 | 53.1646 | olea_europaea | OE9A107238C1 | 70.1863 | 52.1739 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 68.3544 | 50.6329 | eucalyptus_grandis | KCW58783 | 71.0526 | 52.6316 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 68.9873 | 51.8987 | eucalyptus_grandis | KCW58796 | 68.5535 | 51.5723 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 68.3544 | 51.8987 | eucalyptus_grandis | KCW58801 | 67.9245 | 51.5723 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 69.6203 | 53.7975 | eucalyptus_grandis | KCW58807 | 71.4286 | 55.1948 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 86.076 | 84.1772 | camelina_sativa | Csa17g010510.1.cds1 | 89.4737 | 87.5 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 90.5063 | 87.9747 | camelina_sativa | Csa03g010520.1.cds1 | 90.5063 | 87.9747 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 89.8734 | 86.7089 | camelina_sativa | Csa14g008530.1.cds1 | 89.8734 | 86.7089 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 58.8608 | 44.3038 | eragrostis_tef | Et_4B_036005.CDS1 | 57.0552 | 42.9448 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 58.8608 | 44.3038 | eragrostis_tef | Et_4A_032695.CDS | 51.0989 | 38.4615 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 98.7342 | 97.4684 | arabidopsis_lyrata | scaffold_100715.1 | 98.7342 | 97.4684 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 62.0253 | 47.4684 | nymphaea_colorata | NC10G0162320.1:cds | 57.9882 | 44.3787 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 59.4937 | 44.9367 | echinochloa_crusgalli | scaffold287.28.cds | 33.813 | 25.5396 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 83.5443 | 75.9494 | brassica_oleracea | Bo8g008390.1 | 83.5443 | 75.9494 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 84.1772 | 75.3165 | brassica_oleracea | Bo8g007380.1 | 84.1772 | 75.3165 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 69.6203 | 55.0633 | corchorus_capsularis | OMO66477 | 70.0637 | 55.414 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 51.2658 | 40.5063 | oryza_nivara | ONIVA03G19420.1 | 41.3265 | 32.6531 |
g02367 | arabidopsis_halleri | g02367.t1.cds1 | 69.6203 | 53.7975 | cynara_cardunculus | KVH94362 | 65.0888 | 50.2959 |
Go ID |
Go term |
No. evidence |
Entries |
Species |
Category |