Description

Ensembl ID g02367 Gene ID Accession -
Symbol Alias - Full Name CST complex subunit STN1
Status Confidence Length 2462 bases Strand Plus strand
Position FJVB01000003.1 : 2966723 - 2969184 RNA binding domain tRNA_anti-codon
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g02367 tRNA_anti-codon PF01336 6.5e-12 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g02367.t1 977 158aa g02367.t1.cds1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g02367arabidopsis_hallerig08851.t122.661913.3094arabidopsis_hallerig02367.t1.cds139.873423.4177
g02367arabidopsis_hallerig02469.t121.582712.5899arabidopsis_hallerig02367.t1.cds137.974722.1519

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g02367arabidopsis_hallerig02367.t1.cds174.050651.2658papaver_somniferumRZC8067469.642948.2143
g02367arabidopsis_hallerig02367.t1.cds173.417751.2658papaver_somniferumRZC5093559.183741.3265
g02367arabidopsis_hallerig02367.t1.cds174.050656.3291cannabis_sativa_femalecds.evm.model.01.95873.584955.9748
g02367arabidopsis_hallerig02367.t1.cds153.797534.1772physcomitrium_patensPp3c1_6180V3.437.777824
g02367arabidopsis_hallerig02367.t1.cds194.936791.1392arabidopsis_thalianaAT1G07130.193.7590
g02367arabidopsis_hallerig02367.t1.cds172.151956.3291populus_trichocarpaPotri.005G212900.2.v4.168.674753.6145
g02367arabidopsis_hallerig02367.t1.cds186.07675.3165brassica_junceacds.BjuB03g57530S86.07675.3165
g02367arabidopsis_hallerig02367.t1.cds183.544374.6835brassica_junceacds.BjuA08g29840S83.544374.6835
g02367arabidopsis_hallerig02367.t1.cds182.911475.3165brassica_napusCDX8649982.911475.3165
g02367arabidopsis_hallerig02367.t1.cds183.544374.6835brassica_napusCDY1560183.544374.6835
g02367arabidopsis_hallerig02367.t1.cds174.683558.2278malus_domestica_goldenCDS:MD03G0213700.171.515255.7576
g02367arabidopsis_hallerig02367.t1.cds153.797534.8101marchantia_polymorphaPTQ4026248.571431.4286
g02367arabidopsis_hallerig02367.t1.cds160.759546.2025glycine_maxKRH4386352.45939.8907
g02367arabidopsis_hallerig02367.t1.cds167.721549.3671lupinus_angustifoliusOIW0190262.941245.8824
g02367arabidopsis_hallerig02367.t1.cds167.721549.3671medicago_truncatulaKEH4068159.776543.5754
g02367arabidopsis_hallerig02367.t1.cds167.088648.7342medicago_truncatulaAES9497757.297341.6216
g02367arabidopsis_hallerig02367.t1.cds165.189947.4684pisum_sativumPsat6g050280.1.cds158.857142.8571
g02367arabidopsis_hallerig02367.t1.cds169.620351.2658pisum_sativumPsat6g025560.1.cds164.327547.3684
g02367arabidopsis_hallerig02367.t1.cds169.620351.2658capsicum_annuumPHT9482067.073249.3902
g02367arabidopsis_hallerig02367.t1.cds168.987350.6329solanum_lycopersicumSolyc01g088130.2.1.166.463448.7805
g02367arabidopsis_hallerig02367.t1.cds173.417754.4304sesamum_indicumSIN_1012394.t.cds170.731752.439
g02367arabidopsis_hallerig02367.t1.cds166.455751.2658lactuca_sativacds-PLY71624.161.764747.6471
g02367arabidopsis_hallerig02367.t1.cds157.594945.5696lolium_perennecds.KYUSt_chr2.946651.412440.678
g02367arabidopsis_hallerig02367.t1.cds156.329143.038avena_sativa_ot3098cds.AVESA.00001b.r3.5Ag0000838.155.974842.7673
g02367arabidopsis_hallerig02367.t1.cds157.594944.3038avena_sativa_sangAVESA.00010b.r2.4CG1314850.1.CDS54.166741.6667
g02367arabidopsis_hallerig02367.t1.cds156.329143.038avena_sativa_sangAVESA.00010b.r2.5AG0809660.1.CDS.155.974842.7673
g02367arabidopsis_hallerig02367.t1.cds151.265840.5063oryza_longistaminataKN539251.1_FGP01019.950715.7635
g02367arabidopsis_hallerig02367.t1.cds155.696241.7722oryza_brachyanthaOB03G27920.15541.25
g02367arabidopsis_hallerig02367.t1.cds151.898741.1392oryza_punctataOPUNC03G17660.139.047630.9524
g02367arabidopsis_hallerig02367.t1.cds156.329141.7722oryza_glaberrimaORGLA03G0174700.155.62541.25
g02367arabidopsis_hallerig02367.t1.cds156.96244.3038secale_cerealeSECCE6Rv1G0430080.1.CDS.157.692344.8718
g02367arabidopsis_hallerig02367.t1.cds156.329144.9367secale_cerealeSECCE6Rv1G0430120.1.CDS.157.051345.5128
g02367arabidopsis_hallerig02367.t1.cds156.329143.6709secale_cerealeSECCE6Rv1G0430170.1.CDS.157.051344.2308
g02367arabidopsis_hallerig02367.t1.cds158.227843.038setaria_viridisTKV9593947.916735.4167
g02367arabidopsis_hallerig02367.t1.cds160.759544.9367sorghum_bicolorEER9222158.536643.2927
g02367arabidopsis_hallerig02367.t1.cds158.227843.6709setaria_italicaKQK9076156.441742.3313
g02367arabidopsis_hallerig02367.t1.cds155.696246.2025triticum_aestivumTraesCS3A02G485900.125.882421.4706
g02367arabidopsis_hallerig02367.t1.cds157.594944.9367triticum_aestivumTraesCS3D02G481300.1.cds158.333345.5128
g02367arabidopsis_hallerig02367.t1.cds155.696243.6709triticum_aestivumTraesCS3B02G533300.1.cds156.410344.2308
g02367arabidopsis_hallerig02367.t1.cds156.96244.9367triticum_aestivumTraesCS3A02G485700.1.cds157.692345.5128
g02367arabidopsis_hallerig02367.t1.cds156.329144.9367triticum_aestivumTraesCS3A02G486100.1.cds157.051345.5128
g02367arabidopsis_hallerig02367.t1.cds156.96244.9367triticum_aestivumTraesCS3D02G481600.1.cds157.692345.5128
g02367arabidopsis_hallerig02367.t1.cds154.430443.6709triticum_aestivumTraesCS3B02G534200.1.cds155.128244.2308
g02367arabidopsis_hallerig02367.t1.cds156.329143.6709triticum_aestivumTraesCS3B02G533600.1.cds157.051344.2308
g02367arabidopsis_hallerig02367.t1.cds160.759545.5696zea_maysZm00001eb394240_P00158.181843.6364
g02367arabidopsis_hallerig02367.t1.cds161.392446.2025ananas_comosusAco017164.1.mrna1.cds159.146344.5122
g02367arabidopsis_hallerig02367.t1.cds155.063344.3038triticum_turgidumTRITD0Uv1G113850.155.769244.8718
g02367arabidopsis_hallerig02367.t1.cds156.96244.9367triticum_turgidumTRITD3Av1G266140.157.692345.5128
g02367arabidopsis_hallerig02367.t1.cds155.696245.5696triticum_turgidumTRITD3Av1G266090.225.882421.1765
g02367arabidopsis_hallerig02367.t1.cds156.96244.9367triticum_turgidumTRITD3Av1G266070.157.692345.5128
g02367arabidopsis_hallerig02367.t1.cds156.329143.6709triticum_turgidumTRITD3Bv1G260280.157.051344.2308
g02367arabidopsis_hallerig02367.t1.cds155.063344.3038triticum_turgidumTRITD0Uv1G026030.155.769244.8718
g02367arabidopsis_hallerig02367.t1.cds155.063344.3038triticum_turgidumTRITD0Uv1G123370.155.769244.8718
g02367arabidopsis_hallerig02367.t1.cds174.683555.6962corylus_avellanaCav04g01050.t1.cds170.658752.6946
g02367arabidopsis_hallerig02367.t1.cds172.784860.1266corylus_avellanaCav02g11530.t1.cds168.862356.8862
g02367arabidopsis_hallerig02367.t1.cds156.329141.7722brachypodium_distachyonKQK2156855.974841.5094
g02367arabidopsis_hallerig02367.t1.cds142.405127.8481homo_sapiensENSP0000022495018.206511.9565
g02367arabidopsis_hallerig02367.t1.cds171.51952.5316fraxinus_excelsiorFRAEX38873_v2_000180150.1.cds170.186351.5528
g02367arabidopsis_hallerig02367.t1.cds155.063341.1392oryza_indicaBGIOSGA010670-PA26.605519.8777
g02367arabidopsis_hallerig02367.t1.cds169.620351.8987nicotiana_attenuataOIS9748567.073250
g02367arabidopsis_hallerig02367.t1.cds173.417755.6962coffea_canephoraCDP0365875.324757.1429
g02367arabidopsis_hallerig02367.t1.cds156.96244.9367triticum_urartuTuG1812G0300005276.01.T01.cds26348057.692345.5128
g02367arabidopsis_hallerig02367.t1.cds156.96244.3038triticum_urartuTuG1812G0300005275.01.T0141.666732.4074
g02367arabidopsis_hallerig02367.t1.cds156.96244.9367triticum_urartuTuG1812S0002315200.01.T01.s_cds4530257.692345.5128
g02367arabidopsis_hallerig02367.t1.cds151.898739.8734oryza_meridionalisOMERI03G16650.146.590935.7955
g02367arabidopsis_hallerig02367.t1.cds156.329141.7722oryza_sativaOs03t0366900-0155.62541.25
g02367arabidopsis_hallerig02367.t1.cds146.835432.2785dioscorea_rotundataDRNTG_21650.1.cds159.677441.129
g02367arabidopsis_hallerig02367.t1.cds169.620357.5949citrus_clementinaESR5726968.7556.875
g02367arabidopsis_hallerig02367.t1.cds153.797541.7722leersia_perrieriLPERR03G16020.141.262132.0388
g02367arabidopsis_hallerig02367.t1.cds160.126643.038musa_acuminataMa04_p35300.264.625846.2585
g02367arabidopsis_hallerig02367.t1.cds190.506384.8101eutrema_salsugineumESQ3619490.506384.8101
g02367arabidopsis_hallerig02367.t1.cds170.253256.962kalanchoe_fedtschenkoiKaladp0040s0043.1.v1.1.CDS.170.700657.3248
g02367arabidopsis_hallerig02367.t1.cds156.329144.3038hordeum_vulgareHORVU.MOREX.r3.3HG0229410.1.CDS155.974844.0252
g02367arabidopsis_hallerig02367.t1.cds156.96244.3038hordeum_vulgareHORVU.MOREX.r3.3HG0319520.1.CDS157.692344.8718
g02367arabidopsis_hallerig02367.t1.cds174.050658.2278rosa_chinensisPRQ2605560.621847.6684
g02367arabidopsis_hallerig02367.t1.cds151.265840.5063oryza_barthiiOBART03G18440.141.326532.6531
g02367arabidopsis_hallerig02367.t1.cds170.886153.1646corymbia_citriodoracds-KAF8010828.170.440352.8302
g02367arabidopsis_hallerig02367.t1.cds171.51954.4304corymbia_citriodoracds-KAF7848256.171.069254.0881
g02367arabidopsis_hallerig02367.t1.cds183.544374.6835brassica_rapa_ro18A08p044480.1_BraROA.1.cds183.544374.6835
g02367arabidopsis_hallerig02367.t1.cds171.51953.1646olea_europaeaOE9A027927C170.186352.1739
g02367arabidopsis_hallerig02367.t1.cds171.51953.1646olea_europaeaOE9A107238C170.186352.1739
g02367arabidopsis_hallerig02367.t1.cds168.354450.6329eucalyptus_grandisKCW5878371.052652.6316
g02367arabidopsis_hallerig02367.t1.cds168.987351.8987eucalyptus_grandisKCW5879668.553551.5723
g02367arabidopsis_hallerig02367.t1.cds168.354451.8987eucalyptus_grandisKCW5880167.924551.5723
g02367arabidopsis_hallerig02367.t1.cds169.620353.7975eucalyptus_grandisKCW5880771.428655.1948
g02367arabidopsis_hallerig02367.t1.cds186.07684.1772camelina_sativaCsa17g010510.1.cds189.473787.5
g02367arabidopsis_hallerig02367.t1.cds190.506387.9747camelina_sativaCsa03g010520.1.cds190.506387.9747
g02367arabidopsis_hallerig02367.t1.cds189.873486.7089camelina_sativaCsa14g008530.1.cds189.873486.7089
g02367arabidopsis_hallerig02367.t1.cds158.860844.3038eragrostis_tefEt_4B_036005.CDS157.055242.9448
g02367arabidopsis_hallerig02367.t1.cds158.860844.3038eragrostis_tefEt_4A_032695.CDS51.098938.4615
g02367arabidopsis_hallerig02367.t1.cds198.734297.4684arabidopsis_lyratascaffold_100715.198.734297.4684
g02367arabidopsis_hallerig02367.t1.cds162.025347.4684nymphaea_colorataNC10G0162320.1:cds57.988244.3787
g02367arabidopsis_hallerig02367.t1.cds159.493744.9367echinochloa_crusgalliscaffold287.28.cds33.81325.5396
g02367arabidopsis_hallerig02367.t1.cds183.544375.9494brassica_oleraceaBo8g008390.183.544375.9494
g02367arabidopsis_hallerig02367.t1.cds184.177275.3165brassica_oleraceaBo8g007380.184.177275.3165
g02367arabidopsis_hallerig02367.t1.cds169.620355.0633corchorus_capsularisOMO6647770.063755.414
g02367arabidopsis_hallerig02367.t1.cds151.265840.5063oryza_nivaraONIVA03G19420.141.326532.6531
g02367arabidopsis_hallerig02367.t1.cds169.620353.7975cynara_cardunculusKVH9436265.088850.2959

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression