Description

Ensembl ID g01058 Gene ID Accession -
Symbol Alias - Full Name S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase
Status Confidence Length 2945 bases Strand Minus strand
Position FJVB01000002.1 : 584423 - 587367 RNA binding domain Wyosine_form
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
g01058 Wyosine_form PF08608 2.9e-25 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- g01058.t1 2162 648aa g01058.t1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g01058

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
g01058arabidopsis_hallerig01058.t165.432152.9321chlamydomonas_reinhardtiiPNW7321246.491237.6096
g01058arabidopsis_hallerig01058.t181.172871.142papaver_somniferumRZC6639882.316172.144
g01058arabidopsis_hallerig01058.t181.172870.9877papaver_somniferumRZC4456182.316171.9875
g01058arabidopsis_hallerig01058.t145.21641.358cannabis_sativa_femalecds.evm.model.09.4089.602481.9572
g01058arabidopsis_hallerig01058.t174.691463.1173physcomitrium_patensPp3c8_14160V3.258.454149.3961
g01058arabidopsis_hallerig01058.t162.654354.784ficus_caricaFCD_00008885-RA:cds29.062325.4116
g01058arabidopsis_hallerig01058.t178.703766.9753beta_vulgarisKMS9994479.315767.4961
g01058arabidopsis_hallerig01058.t181.327271.6049citrullus_lanatusCla97C08G158680.182.343872.5
g01058arabidopsis_hallerig01058.t182.561771.7593cucumis_sativusKGN6259783.593872.6562
g01058arabidopsis_hallerig01058.t180.864271.9136theobroma_cacaoEOY1475782.260673.1554
g01058arabidopsis_hallerig01058.t198.148197.2222arabidopsis_thalianaAT1G75200.198.299897.3725
g01058arabidopsis_hallerig01058.t181.327272.0679populus_trichocarpaPotri.002G260700.3.v4.182.861673.4277
g01058arabidopsis_hallerig01058.t192.746987.6543brassica_junceacds.BjuB06g28810S92.746987.6543
g01058arabidopsis_hallerig01058.t188.271682.716brassica_junceacds.BjuA07g24490S92.706686.872
g01058arabidopsis_hallerig01058.t192.746987.6543brassica_junceacds.BjuB06g16460S92.746987.6543
g01058arabidopsis_hallerig01058.t193.055688.1173brassica_junceacds.BjuB03g14680S93.779288.8025
g01058arabidopsis_hallerig01058.t192.438386.5741brassica_junceacds.BjuA07g34610S93.157187.2473
g01058arabidopsis_hallerig01058.t192.28486.5741brassica_napusCDY4541693.001687.2473
g01058arabidopsis_hallerig01058.t192.438386.5741brassica_napusCDX6814292.153886.3077
g01058arabidopsis_hallerig01058.t181.172876.0802brassica_napusCDX8588188.701583.1366
g01058arabidopsis_hallerig01058.t192.129686.4198brassica_napusCDX7314992.84687.0918
g01058arabidopsis_hallerig01058.t182.098873.3025malus_domestica_goldenmRNA:MD15G002400082.608773.7578
g01058arabidopsis_hallerig01058.t182.870474.2284malus_domestica_goldenmRNA:MD08G002690083.255874.5736
g01058arabidopsis_hallerig01058.t172.530960.0309marchantia_polymorphaPTQ4682257.387147.4969
g01058arabidopsis_hallerig01058.t183.024774.2284prunus_dulcisVVA2296883.670374.8056
g01058arabidopsis_hallerig01058.t183.024774.0741prunus_persicaONI3268083.670374.6501
g01058arabidopsis_hallerig01058.t174.53764.1975cajanus_cajanC.cajan_43265.t79.310368.3087
g01058arabidopsis_hallerig01058.t179.012369.4444glycine_maxKRH0581579.25769.6594
g01058arabidopsis_hallerig01058.t178.703768.0556glycine_maxKRH1521279.439368.6916
g01058arabidopsis_hallerig01058.t149.382739.8148medicago_truncatulaKEH4013662.745150.5882
g01058arabidopsis_hallerig01058.t135.493832.4074medicago_truncatulaKEH4013589.843882.0312
g01058arabidopsis_hallerig01058.t177.623567.7469phaseolus_vulgarisESW3274939.022534.0574
g01058arabidopsis_hallerig01058.t179.32169.2901pisum_sativumPsat6g008800.1.cds79.813769.7205
g01058arabidopsis_hallerig01058.t173.765463.2716vigna_radiataVradi06g15840.144.382538.0687
g01058arabidopsis_hallerig01058.t178.395168.9815vigna_unguiculataVigun08g015800.1.v1.279.004769.5179
g01058arabidopsis_hallerig01058.t181.944472.5309manihot_esculentaOAY2279981.692372.3077
g01058arabidopsis_hallerig01058.t179.475369.1358solanum_lycopersicumSolyc04g080340.3.177.677267.5716
g01058arabidopsis_hallerig01058.t179.938368.3642sesamum_indicumSIN_1011601.t78.484867.1212
g01058arabidopsis_hallerig01058.t179.475369.1358helianthus_annuusmRNA:HanXRQr2_Chr02g005851180.847770.3297
g01058arabidopsis_hallerig01058.t181.327270.216lactuca_sativacds-PLY77900.179.969769.044
g01058arabidopsis_hallerig01058.t175.308661.8827lolium_perennecds.KYUSt_chr4.845873.71660.574
g01058arabidopsis_hallerig01058.t175.771661.7284avena_sativa_ot3098cds.AVESA.00001b.r3.7Cg0000636.171.470258.2242
g01058arabidopsis_hallerig01058.t175.154361.7284avena_sativa_ot3098cds.AVESA.00001b.r3.4Dg0002004.171.828958.9971
g01058arabidopsis_hallerig01058.t175.308660.9568avena_sativa_ot3098cds.AVESA.00001b.r3.4Ag0001650.170.827357.3295
g01058arabidopsis_hallerig01058.t173.611159.7222avena_sativa_sangAVESA.00010b.r2.7CG0705260.1.CDS36.635929.7235
g01058arabidopsis_hallerig01058.t162.03750.463avena_sativa_sangAVESA.00010b.r2.4DG0753180.1.CDS61.656450.1534
g01058arabidopsis_hallerig01058.t168.827256.1728oryza_longistaminataKN541489.1_FGP00240.252732.852
g01058arabidopsis_hallerig01058.t174.382762.1914oryza_rufipogonORUFI03G37340.173.813261.7152
g01058arabidopsis_hallerig01058.t114.814810.3395oryza_rufipogonORUFI10G07950.141.921429.2576
g01058arabidopsis_hallerig01058.t17562.963oryza_punctataOPUNC03G32880.174.085462.1951
g01058arabidopsis_hallerig01058.t174.382762.1914oryza_glaberrimaORGLA03G0329100.173.813261.7152
g01058arabidopsis_hallerig01058.t175.46362.6543secale_cerealeSECCE5Rv1G0355370.173.867161.3293
g01058arabidopsis_hallerig01058.t175.154362.6543setaria_viridisTKV9107270.375758.6705
g01058arabidopsis_hallerig01058.t175.154362.6543setaria_italicaKQK8687775.038562.5578
g01058arabidopsis_hallerig01058.t175.308662.1914triticum_aestivumTraesCS5A02G408800.173.604860.7843
g01058arabidopsis_hallerig01058.t175.771662.1914triticum_aestivumTraesCS5D02G418600.174.506861.1533
g01058arabidopsis_hallerig01058.t173.611161.5741triticum_aestivumTraesCS5B02G413500.171.945760.181
g01058arabidopsis_hallerig01058.t174.53761.7284zea_maysZm00001eb059170_P00175.233662.3053
g01058arabidopsis_hallerig01058.t177.160565.8951ananas_comosusAco005002.1.mrna176.335965.1908
g01058arabidopsis_hallerig01058.t119.598815.8951asparagus_officinalisONK6492266.492153.9267
g01058arabidopsis_hallerig01058.t175.308662.3457triticum_turgidumTRITD5Bv1G206230.273.604860.9351
g01058arabidopsis_hallerig01058.t174.845762.3457triticum_turgidumTRITD5Av1G209650.173.152360.9351
g01058arabidopsis_hallerig01058.t177.623564.5062amborella_trichopodaERN1747565.837754.712
g01058arabidopsis_hallerig01058.t135.956834.4136corylus_avellanaCav06g06150.t191.372687.451
g01058arabidopsis_hallerig01058.t181.327271.9136gossypium_raimondiiKJB1449582.601973.0407
g01058arabidopsis_hallerig01058.t157.253141.6667homo_sapiensENSP0000048250255.538940.4192
g01058arabidopsis_hallerig01058.t165.277848.3025homo_sapiensENSP0000035264557.786942.7596
g01058arabidopsis_hallerig01058.t179.012367.7469fraxinus_excelsiorFRAEX38873_v2_000246010.1.cds76.417965.5224
g01058arabidopsis_hallerig01058.t169.753158.179oryza_glumipatulaOGLUM03G35610.172.435960.4167
g01058arabidopsis_hallerig01058.t17561.5741eragrostis_curvulaTVU448017561.5741
g01058arabidopsis_hallerig01058.t174.382762.1914oryza_indicaBGIOSGA013647-PA73.813261.7152
g01058arabidopsis_hallerig01058.t181.172871.9136vitis_viniferaVitvi18g00959_P00180.428171.2538
g01058arabidopsis_hallerig01058.t180.401271.142nicotiana_attenuataOIT0405178.700969.6375
g01058arabidopsis_hallerig01058.t135.956833.179coffea_canephoraCDP0751988.257681.4394
g01058arabidopsis_hallerig01058.t181.481570.9877ipomoea_trilobaitb08g03890.t180.733970.3364
g01058arabidopsis_hallerig01058.t175.308662.1914triticum_urartuTuG1812G0500004309.01.T0173.604860.7843
g01058arabidopsis_hallerig01058.t174.228462.5oryza_meridionalisOMERI03G33110.173.435161.8321
g01058arabidopsis_hallerig01058.t182.098873.9198prunus_aviumPav_sc0000078.1_g080.1.mk:mrna82.737274.4946
g01058arabidopsis_hallerig01058.t114.814811.4198oryza_sativaOs10t0365900-0073.282456.4885
g01058arabidopsis_hallerig01058.t181.481571.142pistacia_veracds-EVM0002312.182.115171.6952
g01058arabidopsis_hallerig01058.t182.098871.9136pistacia_veracds-EVM0013756.182.737272.4728
g01058arabidopsis_hallerig01058.t122.222216.358quercus_subercds-POE72382.134.698825.5422
g01058arabidopsis_hallerig01058.t160.030945.9877ciona_savignyiENSCSAVP0000000973459.208545.3577
g01058arabidopsis_hallerig01058.t179.012366.5123chenopodium_quinoaAUR62013733-RA:cds79.750867.134
g01058arabidopsis_hallerig01058.t173.456861.2654chenopodium_quinoaAUR62023420-RA:cds76.774264.0323
g01058arabidopsis_hallerig01058.t154.78448.7654dioscorea_rotundataDRNTG_29248.187.654378.0247
g01058arabidopsis_hallerig01058.t178.549466.821citrus_clementinaESR4822438.825333.0282
g01058arabidopsis_hallerig01058.t181.944472.2222juglans_regiacds.Jr15_06530_p181.944472.2222
g01058arabidopsis_hallerig01058.t158.487746.6049ostreococcus_lucimarinusABO9497473.592258.6408
g01058arabidopsis_hallerig01058.t157.407439.0432saccharomyces_cerevisiaeYPL207W45.925931.2346
g01058arabidopsis_hallerig01058.t181.635871.4506actinidia_chinensisPSR9968382.398872.1184
g01058arabidopsis_hallerig01058.t170.370458.3333leersia_perrieriLPERR03G30230.172.49660.0954
g01058arabidopsis_hallerig01058.t165.277855.4012aegilops_tauschiiAET5Gv20941600.276.769565.1543
g01058arabidopsis_hallerig01058.t178.549466.358musa_acuminataMa05_p02020.178.670866.4606
g01058arabidopsis_hallerig01058.t169.135859.2593selaginella_moellendorffiiEFJ3046971.224261.0493
g01058arabidopsis_hallerig01058.t174.845762.5panicum_halliiPUZ3680673.932961.7378
g01058arabidopsis_hallerig01058.t193.518587.963arabis_alpinaKFK4195993.230887.6923
g01058arabidopsis_hallerig01058.t133.17929.9383quercus_lobataQL02p008579:mrna90.336181.5126
g01058arabidopsis_hallerig01058.t180.709970.3704quercus_lobataQL02p008596:mrna81.718871.25
g01058arabidopsis_hallerig01058.t187.96385.0309eutrema_salsugineumESQ2762295.477492.2948
g01058arabidopsis_hallerig01058.t178.549469.7531kalanchoe_fedtschenkoiKaladp0076s0196.1.v1.178.428469.6456
g01058arabidopsis_hallerig01058.t175.925962.963hordeum_vulgareHORVU.MOREX.r3.5HG0513920.174.096461.4458
g01058arabidopsis_hallerig01058.t183.487773.9198rosa_chinensisPRQ2703483.487773.9198
g01058arabidopsis_hallerig01058.t174.382762.1914oryza_barthiiOBART03G35900.173.813261.7152
g01058arabidopsis_hallerig01058.t125.771615.8951chara_brauniiGBG7840031.21519.2523
g01058arabidopsis_hallerig01058.t170.524760.6481corymbia_citriodoracds-KAF8024342.173.1262.88
g01058arabidopsis_hallerig01058.t192.28486.7284brassica_rapa_ro18A07p047900.1_BraROA.193.001687.4028
g01058arabidopsis_hallerig01058.t192.746986.5741brassica_rapa_ro18A07p035620.1_BraROA.192.60486.4407
g01058arabidopsis_hallerig01058.t180.246968.3642olea_europaeaOE9A103438C178.907467.2231
g01058arabidopsis_hallerig01058.t125.771623.6111olea_europaeaOE9A000348C190.760983.1522
g01058arabidopsis_hallerig01058.t123.919819.5988olea_europaeaOE9A000309C171.759358.7963
g01058arabidopsis_hallerig01058.t174.53765.8951eucalyptus_grandisKCW6825074.422265.7935
g01058arabidopsis_hallerig01058.t197.222293.3642camelina_sativaCsa16g039100.196.923193.0769
g01058arabidopsis_hallerig01058.t197.839594.2901camelina_sativaCsa07g046630.197.990794.4359
g01058arabidopsis_hallerig01058.t197.376593.9815camelina_sativaCsa09g079790.197.226593.8367
g01058arabidopsis_hallerig01058.t178.85868.0556daucus_carotaKZM9166179.59568.6916
g01058arabidopsis_hallerig01058.t124.074115.4321digitaria_exilisDexi9A01G0006880.1:cds58.867937.7358
g01058arabidopsis_hallerig01058.t175.46362.3457digitaria_exilisDexi9B01G0006510.1:cds73.094260.3886
g01058arabidopsis_hallerig01058.t175.308662.5triticum_dicoccoidesTRIDC5AG059290.173.604861.086
g01058arabidopsis_hallerig01058.t171.604960.9568triticum_dicoccoidesTRIDC5BG063530.169.984959.5777
g01058arabidopsis_hallerig01058.t198.765497.6852arabidopsis_lyratascaffold_202461.198.918197.8362
g01058arabidopsis_hallerig01058.t175.154363.7346nymphaea_colorataNC3G0227590.1:cds71.407660.5572
g01058arabidopsis_hallerig01058.t175.617362.6543echinochloa_crusgalliscaffold32.690.cds75.268862.3656
g01058arabidopsis_hallerig01058.t175.925962.963echinochloa_crusgalliscaffold327.95.cds75.57662.6728
g01058arabidopsis_hallerig01058.t191.049485.4938brassica_oleraceaBo6g119350.191.757486.1586
g01058arabidopsis_hallerig01058.t191.35885.3395brassica_oleraceaBo6g086490.192.586.4062
g01058arabidopsis_hallerig01058.t176.697568.5185corchorus_capsularisOMO8757285.689776.5517
g01058arabidopsis_hallerig01058.t174.382762.1914oryza_nivaraONIVA03G37450.173.813261.7152
g01058arabidopsis_hallerig01058.t179.938370.5247trifolium_pratenseTp57577_TGAC_v2_mRNA2087378.366169.1377
g01058arabidopsis_hallerig01058.t178.395166.9753cynara_cardunculusKVH9838673.304562.6263

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression