RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	fgenesh1_pm.C_scaffold_6002153	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	LSM
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	fgenesh1_pm.C_scaffold_6002153	432	143aa	fgenesh1_pm.C_scaffold_6002153

Gene Model

Click here to download fgenesh1_pm.C_scaffold_6002153's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download fgenesh1_pm.C_scaffold_6002153's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_1001871	44.3662	26.0563	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	44.0559	25.8741
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh2_kg.2__1913__AT1G76300.1	46.5116	27.907	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	41.958	25.1748
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	Al_scaffold_0003_785	38.2353	22.549	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	27.2727	16.0839
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	Al_scaffold_0001_239	43.5897	29.9145	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	35.6643	24.4755
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh2_kg.6__3408__AT4G02840.1	46.5517	32.7586	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	37.7622	26.5734

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	60.1399	51.7483	chondrus_crispus	CDF38570	66.6667	57.3643
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	52.4476	42.6573	chondrus_crispus	CDF36960	40.7609	33.1522
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	69.2308	58.7413	chlamydomonas_reinhardtii	PNW81552	73.8806	62.6866
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	76.2238	72.028	marchantia_polymorpha	PTQ49664	72.1854	68.2119
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.7203	papaver_somniferum	RZC51961	76.8212	75.4967
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.9161	80.4196	cannabis_sativa_female	cds.evm.model.01.770	80	76.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.9161	81.1189	ficus_carica	FCD_00035311-RA:cds	73.6196	71.1656
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	65.7343	62.9371	ficus_carica	FCD_00006923-RA:cds	75.8064	72.5806
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.7203	79.021	beta_vulgaris	KMT06000	78.6207	77.931
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	74.1259	68.5315	cucumis_melo	MELO3C024092.2.1	43.2653	40
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	77.6224	cucumis_melo	MELO3C018097.2.1	75.8389	74.4966
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	77.6224	cucumis_sativus	KGN44471	75.8389	74.4966
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	77.6224	cucumis_sativus	KGN54771	46.3115	45.4918
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	78.3217	populus_trichocarpa	Potri.002G205700.1.v4.1	78.6667	74.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.021	populus_trichocarpa	Potri.014G130700.1.v4.1	77.4834	74.8344
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.7203	77.6224	citrullus_lanatus	Cla97C09G172870.1	63.3333	61.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	86.014	85.3147	arabidopsis_thaliana	AT5G27720.1	95.3488	94.5736
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	79.7203	prunus_dulcis	VVA14157	78.1457	75.4967
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	81.8182	brassica_napus	CDY19734	89.4737	87.9699
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	81.8182	brassica_napus	CDX80625	85.5072	84.7826
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	81.1189	brassica_napus	CDX86143	85.5072	84.058
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	84.6154	81.8182	brassica_napus	CDX99972	86.4286	83.5714
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	78.3217	malus_domestica_golden	mRNA:MD11G0250900	78.5235	75.1678
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	79.021	malus_domestica_golden	mRNA:MD03G0234500	77.6316	74.3421
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	79.7203	prunus_persica	ONH93893	78.1457	75.4967
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	81.8182	brassica_juncea	cds.BjuB07g32290S	92.2481	90.6977
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	58.042	53.1469	brassica_juncea	cds.BjuA06g10180S	85.567	78.3505
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	74.1259	71.3287	cajanus_cajan	C.cajan_25059.t	61.2717	58.9595
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	73.4266	72.028	cajanus_cajan	C.cajan_06686.t	72.9167	71.5278
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	80.4196	glycine_max	KRH31884	79.1946	77.1812
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	60.8392	58.042	glycine_max	KRG96430	52.7273	50.303
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	80.4196	glycine_max	KRH71562	79.1946	77.1812
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	81.1189	glycine_max	KRH68174	79.7297	78.3784
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.7203	lupinus_angustifolius	OIW06779	78.3784	77.027
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	84.6154	81.8182	lupinus_angustifolius	OIV91290	61.4213	59.3909
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	77.6224	74.8252	phaseolus_vulgaris	ESW16286	77.6224	74.8252
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	79.7203	phaseolus_vulgaris	ESW35094	80.4054	77.027
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.9161	81.8182	medicago_truncatula	AET02932	82.1918	80.137
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	81.1189	medicago_truncatula	AES82132	78.6667	77.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	81.1189	medicago_truncatula	AET04566	78.6667	77.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.9161	81.8182	medicago_truncatula	KEH19398	82.1918	80.137
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	53.8462	51.049	medicago_truncatula	AES61801	72.6415	68.8679
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	79.021	vigna_angularis	KOM39472	79.7297	76.3513
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	60.8392	60.1399	vigna_angularis	KOM34891	96.6667	95.5556
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	81.8182	pisum_sativum	Psat3g021920.1.cds	61.1399	60.6218
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	80.4196	pisum_sativum	Psat6g165920.2.cds	78.6667	76.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	67.8322	65.7343	vigna_radiata	Vradi08g10200.1	74.0458	71.7557
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	84.6154	79.7203	vigna_radiata	Vradi03g05990.1	45.4887	42.8571
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.021	vigna_unguiculata	Vigun07g118200.1.v1.2	78	75.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	77.6224	vigna_unguiculata	Vigun01g190800.1.v1.2	77.7027	75
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	76.9231	solanum_lycopersicum	Solyc01g099740.3.1	77.7027	74.3243
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.7273	65.7343	solanum_lycopersicum	Solyc09g065940.3.1	67.5325	61.039
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	58.042	55.9441	manihot_esculenta	OAY42317	68.0328	65.5738
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.7203	76.2238	capsicum_annuum	PHT62042	77.551	74.1497
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	41.958	39.1608	solanum_tuberosum	PGSC0003DMT400019498	61.8557	57.732
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	77.6224	sesamum_indicum	SIN_1012531.t	48.1781	44.9393
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	77.6224	73.4266	lactuca_sativa	cds-PLY81209.1	82.2222	77.7778
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	51.7483	51.049	helianthus_annuus	mRNA:HanXRQr2_Chr03g0100301	96.1039	94.8052
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	52.4476	51.049	helianthus_annuus	mRNA:HanXRQr2_Chr09g0374061	100	97.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	avena_sativa_sang	AVESA.00010b.r2.3AG0425020.1.CDS	79.5775	77.4648
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	avena_sativa_sang	AVESA.00010b.r2.3DG0525720.1.CDS	79.5775	77.4648
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	avena_sativa_ot3098	cds.AVESA.00001b.r3.3Cg0001769.1	53.3019	51.8868
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	avena_sativa_ot3098	cds.AVESA.00001b.r3.3Ag0001002.3	55.9406	54.4554
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	avena_sativa_ot3098	cds.AVESA.00001b.r3.3Dg0000567.2	79.5775	77.4648
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	84.6154	79.021	oryza_longistaminata	KN541569.1_FGP002	64.0212	59.7884
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.028	67.8322	oryza_rufipogon	ORUFI01G10810.1	77.4436	72.9323
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	69.9301	68.5315	lolium_perenne	cds.KYUSt_chr3.17744	65.3595	64.0523
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.028	66.4336	oryza_punctata	OPUNC01G09730.1	67.7632	62.5
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	oryza_glaberrima	ORGLA01G0089600.1	79.5918	75.5102
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	secale_cereale	SECCE3Rv1G0171300.1	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.7203	setaria_viridis	TKW12755	80.137	78.0822
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.7203	setaria_italica	KQL03860	80.137	78.0822
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	triticum_urartu	TuG1812G0300001955.01.T01	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	78.3217	zea_mays	Zm00001eb127790_P002	67.4419	65.1163
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.021	zea_mays	Zm00001eb333500_P001	79.4521	77.3973
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	78.3217	76.2238	triticum_turgidum	TRITD3Av1G082490.2	62.5698	60.8939
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	triticum_turgidum	TRITD3Bv1G087050.1	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.021	ananas_comosus	Aco001862.1.mrna1	66.2857	64.5714
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	triticum_aestivum	TraesCS3A02G175900.1	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	triticum_aestivum	TraesCS3B02G205600.2	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	triticum_aestivum	TraesCS3D02G181600.1	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	62.9371	51.7483	caenorhabditis_elegans	F32A5.7.1	73.1707	60.1626
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	78.3217	sorghum_bicolor	EES02709	79.3103	77.2414
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	60.1399	59.4406	asparagus_officinalis	ONK55071	97.7273	96.5909
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	76.2238	asparagus_officinalis	ONK68259	58.8832	55.3299
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	67.8322	60.8392	homo_sapiens	ENSP00000469468	69.7842	62.5899
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	77.6224	amborella_trichopoda	ERN02219	77.3973	76.0274
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	vitis_vinifera	Vitvi14g00175_P001	78.5235	74.4966
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	70.6294	57.3427	drosophila_melanogaster	FBpp0099642	65.5844	53.2468
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.021	ipomoea_triloba	itb15g13170.t1	80.6897	77.931
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	80.4196	ipomoea_triloba	itb10g12370.t1	81.3793	79.3103
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	brachypodium_distachyon	KQK03686	79.5775	77.4648
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	oryza_sativa	Os01t0256900-01	79.5918	75.5102
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	oryza_meridionalis	OMERI01G09920.1	79.5918	75.5102
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.021	eragrostis_curvula	TVU22461	80.137	77.3973
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	50.3497	47.5524	physcomitrium_patens	Pp3c1_35400V3.2	82.7586	78.1609
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	76.9231	73.4266	physcomitrium_patens	Pp3c14_11180V3.1	69.1824	66.0377
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	80.4196	gossypium_raimondii	KJB22525	77.8523	77.1812
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	gossypium_raimondii	KJB49934	68.0233	64.5349
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.028	67.8322	oryza_glumipatula	OGLUM01G11300.1	77.4436	72.9323
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	coffea_canephora	CDP17186	70.9091	67.2727
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.7203	theobroma_cacao	EOX95047	78.5235	76.5101
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	69.2308	61.5385	ciona_savignyi	ENSCSAVP00000014715	79.2	70.4
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	78.3217	fraxinus_excelsior	FRAEX38873_v2_000050370.2.cds	79.3333	74.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.7203	76.2238	fraxinus_excelsior	FRAEX38873_v2_000249940.1.cds	81.4286	77.8571
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.7273	67.8322	fraxinus_excelsior	FRAEX38873_v2_000379430.1.cds	77.037	71.8519
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	oryza_indica	BGIOSGA001965-PA	79.5918	75.5102
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	75.5245	cynara_cardunculus	KVI01643	77.931	74.4828
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.9161	80.4196	juglans_regia	cds.Jr11_14590_p1	80	76.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.9161	80.4196	juglans_regia	cds.Jr08_12400_p1	81.0811	77.7027
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	79.7203	juglans_regia	cds.Jr08_12410_p1	65.7459	62.9834
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.021	saccharum_spontaneum	Sspon.03G0017390-3C-mRNA-1:cds	79.4521	77.3973
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	65.035	61.5385	saccharum_spontaneum	Sspon.03G0017390-1A-mRNA-1:cds	53.7572	50.8671
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	67.8322	62.9371	saccharum_spontaneum	Sspon.03G0017390-4D-mRNA-1	18.835	17.4757
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.021	saccharum_spontaneum	Sspon.03G0017390-2B-mRNA-1:cds	79.4521	77.3973
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	80.4196	pistacia_vera	cds-EVM0027542.1	79.3333	76.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	76.9231	eucalyptus_grandis	KCW50019	77.3333	73.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	79.021	chenopodium_quinoa	AUR62008655-RA:cds	79.8611	78.4722
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	79.021	chenopodium_quinoa	AUR62033113-RA:cds	58.6735	57.6531
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	59.4406	41.2587	galdieria_sulphuraria	EME26802	66.9291	46.4567
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	73.4266	67.1329	chara_braunii	GBG79380	70.9459	64.8649
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	80.4196	citrus_clementina	ESR46030	79.3333	76.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	80.4196	citrus_clementina	ESR57540	79.3333	76.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.9161	81.1189	eutrema_salsugineum	ESQ49515	86.9565	84.058
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	45.4545	30.7692	saccharomyces_cerevisiae	YER112W	34.7594	23.5294
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.028	67.8322	oryza_barthii	OBART01G09880.1	77.4436	72.9323
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	78.3217	dioscorea_rotundata	DRNTG_25146.1	77.1812	75.1678
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	77.6224	corymbia_citriodora	cds-KAF8006708.1	78	74
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	79.7203	musa_acuminata	Ma02_p08900.1	77.1812	76.5101
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.7203	musa_acuminata	Ma01_p06590.2	79.0541	77.027
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.021	rosa_chinensis	PRQ26357	78.3784	76.3513
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	hordeum_vulgare	HORVU.MOREX.r3.3HG0253800.1	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	81.8182	brassica_oleracea	Bo9g010500.1	92.2481	90.6977
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	78.3217	quercus_lobata	QL03p020177:mrna	78.5235	75.1678
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.7203	corchorus_capsularis	OMO63831	78.3784	77.027
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	80.4196	78.3217	kalanchoe_fedtschenkoi	Kaladp0024s0628.1.v1.1	79.8611	77.7778
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	86.014	86.014	arabidopsis_halleri	g17923.t1	95.3488	95.3488
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	64.3357	57.3427	ostreococcus_lucimarinus	ABO96486	80	71.3043
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	triticum_dicoccoides	TRIDC3AG024440.1	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.021	76.9231	triticum_dicoccoides	TRIDC3BG028150.1	79.021	76.9231
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	57.3427	55.2448	digitaria_exilis	Dexi5A01G0011480.1:cds	54.6667	52.6667
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	63.6364	61.5385	digitaria_exilis	Dexi5B01G0011780.1:cds	54.1667	52.381
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	63.6364	60.8392	nymphaea_colorata	NC6G0097620.1:cds	75.8333	72.5
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	86.014	83.9161	camelina_sativa	Csa13g036150.1	95.3488	93.0233
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	85.3147	83.2168	camelina_sativa	Csa08g027970.1	94.5736	92.2481
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	77.6224	73.4266	selaginella_moellendorffii	EFJ10085	61.6667	58.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	52.4476	51.049	selaginella_moellendorffii	EFJ34907	83.3333	81.1111
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	81.8182	brassica_rapa_ro18	A09p005690.1_BraROA.1	92.2481	90.6977
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	67.1329	63.6364	eragrostis_tef	Et_3A_025795.CDS	50	47.3958
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	77.6224	74.8252	eragrostis_tef	Et_3B_031508.CDS	68.0982	65.6442
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.028	67.8322	leersia_perrieri	LPERR01G09400.1	78.626	74.0458
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.021	actinidia_chinensis	PSR94764	79.0541	76.3513
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.021	actinidia_chinensis	PSS14672	79.0541	76.3513
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	78.3217	76.2238	aegilops_tauschii	AET3Gv20400700.6	67.0659	65.2695
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	78.3217	74.8252	olea_europaea	OE9A077760C1	74.6667	71.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	78.3217	74.8252	olea_europaea	OE9A056130C2	74.6667	71.3333
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	82.5175	78.3217	olea_europaea	OE9A107457C4	79.1946	75.1678
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.7203	echinochloa_crusgalli	scaffold298.11.cds	80.6897	78.6207
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	79.021	echinochloa_crusgalli	scaffold54.321.cds	80	77.931
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	44.7552	39.8601	echinochloa_crusgalli	scaffold458.44.cds	15.0943	13.4434
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.8182	79.7203	echinochloa_crusgalli	scaffold109.125.cds	80.6897	78.6207
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	72.028	67.8322	oryza_nivara	ONIVA01G12400.1	77.4436	72.9323
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	83.2168	81.8182	trifolium_pratense	Tp57577_TGAC_v2_mRNA9936	76.7742	75.4839
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	79.7203	76.2238	trifolium_pratense	Tp57577_TGAC_v2_mRNA35151	75.4967	72.1854
fgenesh1_pm.C_scaffold_6002153	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6002153	81.1189	77.6224	quercus_suber	cds-POE72561.1	77.8523	74.4966

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression