RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	fgenesh1_pm.C_scaffold_4002334	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	Fcf1
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID

Gene Model

Click here to download fgenesh1_pm.C_scaffold_4002334's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download fgenesh1_pm.C_scaffold_4002334's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	Al_scaffold_0001_2651	84.6939	78.5714	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	93.2584	86.5169
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	Al_scaffold_0001_2840	56.8	52	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	79.7753	73.0337
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh2_kg.4__1480__AT2G34570.1	22.4199	12.8114	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	35.3933	20.2247

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	39.8876	33.1461	chondrus_crispus	CDF39978	65.1376	54.1284
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	75.2809	58.9888	chlamydomonas_reinhardtii	PNW72170	69.7917	54.6875
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.8315	69.1011	marchantia_polymorpha	PTQ47574	75.8794	61.809
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	56.7416	41.573	papaver_somniferum	RZC73788	38.1132	27.9245
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.2022	77.5281	cannabis_sativa_female	cds.evm.model.07.1265	80.102	70.4082
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	75.2809	beta_vulgaris	KMT20380	75.7576	67.6768
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	78.0899	69.1011	cucumis_melo	MELO3C009766.2.1	75.5435	66.8478
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.764	78.0899	cucumis_sativus	KGN59454	79.798	70.202
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	74.1573	populus_trichocarpa	Potri.002G166200.1.v4.1	76.7677	66.6667
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	86.5169	75.2809	populus_trichocarpa	Potri.014G092600.3.v4.1	77.7778	67.6768
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.764	77.5281	citrullus_lanatus	Cla97C10G199020.1	79.798	69.697
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	93.8202	88.2022	arabidopsis_thaliana	AT2G46230.1	85.2041	80.102
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	77.5281	prunus_dulcis	VVA23697	53.7931	47.5862
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	83.1461	brassica_napus	CDY65208	83.1633	75.5102
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	82.5843	brassica_napus	CDY42021	79.1262	71.3592
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	82.5843	brassica_napus	CDY27326	73.0942	65.9193
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	82.0225	brassica_napus	CDX79999	83.1633	74.4898
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.0787	76.9663	malus_domestica_golden	mRNA:MD01G0055800	78.2828	69.1919
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	77.5281	prunus_persica	ONI23305	78.7879	69.697
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	90.4494	82.0225	brassica_juncea	cds.BjuB06g58210S	82.1429	74.4898
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	82.0225	brassica_juncea	cds.BjuA05g01470S	83.1633	74.4898
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	86.5169	75.8427	cajanus_cajan	C.cajan_32965.t	64.9789	56.962
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	74.7191	cajanus_cajan	C.cajan_10831.t	71.831	62.4413
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	59.5506	47.191	glycine_max	KRG97097	58.2418	46.1538
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	75.2809	glycine_max	KRH26742	77.2727	67.6768
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	75.8427	65.7303	glycine_max	KRH68850	70.6806	61.2565
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	75.2809	glycine_max	KRH22590	77.2727	67.6768
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	76.4045	lupinus_angustifolius	OIW21687	77.665	69.0355
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	74.7191	phaseolus_vulgaris	ESW21990	76.7677	67.1717
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	71.9101	medicago_truncatula	AES76735	75.2525	64.6465
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.0337	medicago_truncatula	AES82733	75.2525	65.6566
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.8315	74.7191	pisum_sativum	Psat3g005280.1.cds	76.2626	67.1717
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.8315	74.1573	vigna_radiata	Vradi0234s00150.1	72.2488	63.1579
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	75.8427	vigna_unguiculata	Vigun05g229800.1.v1.2	76.7677	68.1818
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	77.5281	solanum_lycopersicum	Solyc03g121140.3.1	18.4615	16.3314
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	86.5169	76.4045	manihot_esculenta	OAY37257	77.7778	68.6869
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	74.1573	capsicum_annuum	PHT88936	73.0769	63.4615
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	76.9663	solanum_tuberosum	PGSC0003DMT400006706	78.7879	69.1919
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	75.8427	lactuca_sativa	cds-PLY77483.1	88.9535	78.4884
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	52.2472	42.6966	lactuca_sativa	cds-PLY80511.1	72.6562	59.375
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.764	77.5281	helianthus_annuus	mRNA:HanXRQr2_Chr17g0820501	79.798	69.697
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	74.7191	avena_sativa_sang	AVESA.00010b.r2.5CG0862470.1.CDS	74.3719	66.8342
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	avena_sativa_sang	AVESA.00010b.r2.1AG0038050.1.CDS	74.8744	66.3317
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	74.7191	avena_sativa_sang	AVESA.00010b.r2.7AG1204260.1.CDS	74.3719	66.8342
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	70.7865	65.1685	avena_sativa_sang	AVESA.00010b.r2.7DG1339810.1.CDS	81.8182	75.3247
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	73.5955	avena_sativa_sang	AVESA.00010b.r2.1AG0006500.1.CDS	74.3719	65.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	avena_sativa_sang	AVESA.00010b.r2.1DG0157140.1.CDS	74.8744	66.3317
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	74.7191	avena_sativa_ot3098	cds.AVESA.00001b.r3.5Cg0003112.1	74.3719	66.8342
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	avena_sativa_ot3098	cds.AVESA.00001b.r3.1Dg0001952.2	51.5571	45.6747
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	76.9663	69.1011	avena_sativa_ot3098	cds.AVESA.00001b.r3.7Dg0003308.1	68.1592	61.194
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	avena_sativa_ot3098	cds.AVESA.00001b.r3.1Ag0001931.1	55.1852	48.8889
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	73.5955	oryza_longistaminata	KN538819.1_FGP001	73.1707	63.9024
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	73.0337	oryza_rufipogon	ORUFI06G03940.1	70.8134	62.201
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	82.5843	73.5955	lolium_perenne	cds.KYUSt_chr7.37529	45.6522	40.6832
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	lolium_perenne	cds.KYUSt_chr1.38850	61.8257	54.7718
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	73.5955	oryza_brachyantha	OB06G13640.1	75.3769	65.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	49.4382	39.3258	oryza_punctata	OPUNC06G03680.1	75.2137	59.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	74.1573	oryza_glaberrima	ORGLA06G0036300.1	70.7547	62.2642
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.0337	secale_cereale	SECCE4Rv1G0262380.1	74.8744	65.3266
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	setaria_viridis	TKW20127	74.8744	66.3317
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	setaria_italica	KQL09674	67.7273	60
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	72.4719	triticum_urartu	TuG1812G0700001208.01.T01	74.8744	64.8241
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.5955	zea_mays	Zm00001eb376230_P001	74.8744	65.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	73.0337	64.6067	zea_mays	Zm00001eb376200_P001	72.2222	63.8889
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	73.0337	zea_mays	Zm00001eb376300_P001	74.3719	65.3266
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	72.4719	64.6067	zea_mays	Zm00001eb376270_P001	71.6667	63.8889
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.0337	zea_mays	Zm00001eb376330_P001	74.8744	65.3266
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.5955	triticum_turgidum	TRITD7Bv1G004470.4	73.399	64.532
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	72.4719	triticum_turgidum	TRITD7Av1G034720.1	70.283	60.8491
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	75.2809	ananas_comosus	Aco000356.1.mrna1	77.2727	67.6768
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	72.4719	triticum_aestivum	TraesCS7A02G117600.1	74.8744	64.8241
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	72.4719	triticum_aestivum	TraesCS7D02G113200.1	74.3719	64.8241
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.5955	triticum_aestivum	TraesCS7B02G014700.2	74.8744	65.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	68.5393	46.0674	caenorhabditis_elegans	F30A10.9.1	62.2449	41.8367
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	73.0337	sorghum_bicolor	EER89232	74.3719	65.3266
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	48.3146	39.3258	asparagus_officinalis	ONK66489	64.1791	52.2388
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	76.9663	61.7978	homo_sapiens	ENSP00000344393	69.1919	55.5556
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	42.6966	39.3258	amborella_trichopoda	ERN09097	91.5663	84.3373
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	79.7753	68.5393	corylus_avellana	Cav07g06900.t1	64.2534	55.2036
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	76.9663	vitis_vinifera	Vitvi15g04618_P001	77.2727	69.1919
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	76.9663	vitis_vinifera	Vitvi15g04598_P001	60.2362	53.937
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	70.2247	52.809	drosophila_melanogaster	FBpp0079470	62.5	47
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.0787	78.0899	ipomoea_triloba	itb11g00190.t1	78.2828	70.202
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.5955	brachypodium_distachyon	KQK19514	74.8744	65.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	74.1573	oryza_sativa	Os06t0158600-01	75.3769	66.3317
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	72.4719	oryza_meridionalis	OMERI06G04480.3	75.5102	65.8163
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	73.0337	eragrostis_curvula	TVU12457	58.1395	50.3876
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	67.9775	physcomitrium_patens	Pp3c7_15560V3.2	75.7576	61.1111
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	67.4157	physcomitrium_patens	Pp3c11_12810V3.2	74.7475	60.6061
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	90.4494	76.9663	gossypium_raimondii	KJB41434	81.3131	69.1919
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	82.0225	71.9101	oryza_glumipatula	OGLUM06G04000.1	68.8679	60.3774
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.764	78.0899	nicotiana_attenuata	OIT07377	41.4698	36.4829
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	40.4494	35.9551	coffea_canephora	CDP21693	64.8649	57.6577
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.2022	75.8427	coffea_canephora	CDP08735	79.2929	68.1818
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	89.8876	78.0899	theobroma_cacao	EOX95823	80.8081	70.202
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	70.2247	56.7416	ciona_savignyi	ENSCSAVP00000008415	65.7895	53.1579
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	75.8427	fraxinus_excelsior	FRAEX38873_v2_000000640.1.cds	78.7879	68.1818
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	74.1573	oryza_indica	BGIOSGA021867-PA	75.3769	66.3317
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	65.7303	56.7416	cynara_cardunculus	KVH97277	58.209	50.2488
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	73.0337	juglans_regia	cds.Jr07_07870_p1	78.7879	65.6566
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	65.7303	56.7416	saccharum_spontaneum	Sspon.08G0014460-2D-mRNA-1:cds	70.0599	60.479
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	44.9438	40.4494	saccharum_spontaneum	Sspon.08G0014460-1A-mRNA-1:cds	72.0721	64.8649
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.2022	79.7753	pistacia_vera	cds-EVM0013414.1	79.2929	71.7172
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	82.5843	arabis_alpina	KFK37421	83.1633	75
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.2022	75.8427	eucalyptus_grandis	KCW71541	79.2929	68.1818
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	74.1573	chenopodium_quinoa	AUR62004429-RA:cds	74.8768	65.0246
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	74.7191	chenopodium_quinoa	AUR62022636-RA:cds	77.2727	67.1717
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	70.2247	52.2472	galdieria_sulphuraria	EME31379	63.4518	47.2081
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	80.3371	67.4157	chara_braunii	GBG75705	71.8593	60.3015
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	89.3258	78.0899	citrus_clementina	ESR58155	80.303	70.202
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	92.1348	83.7079	eutrema_salsugineum	ESQ39262	83.6735	76.0204
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	72.4719	55.618	saccharomyces_cerevisiae	YDR339C	68.254	52.381
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	73.5955	oryza_barthii	OBART06G03880.1	70.7547	61.7925
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.0787	76.4045	dioscorea_rotundata	DRNTG_09784.1	78.2828	68.6869
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.2022	76.9663	corymbia_citriodora	cds-KAF8026946.1	79.2929	69.1919
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	86.5169	77.5281	musa_acuminata	Ma04_p21960.1	77.7778	69.697
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	75.8427	musa_acuminata	Ma05_p11390.1	48.4076	42.9936
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	88.2022	77.5281	rosa_chinensis	PRQ58356	79.2929	69.697
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	82.5843	71.3483	hordeum_vulgare	HORVU.MOREX.r3.7HG0654170.1	72.4138	62.5616
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	82.5843	brassica_oleracea	Bo4g196100.1	71.4912	64.4737
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	72.4719	quercus_lobata	QL04p058903:mrna	76.7677	65.1515
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.3933	72.4719	quercus_lobata	QL06p021685:mrna	62.8099	53.3058
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	77.5281	67.4157	corchorus_capsularis	OMO64361	92	80
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	82.5843	70.7865	kalanchoe_fedtschenkoi	Kaladp0081s0268.1.v1.1	72.7723	62.3762
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	70.2247	51.6854	cyanidioschyzon_merolae	CML046CT	63.7755	46.9388
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	43.8202	39.8876	arabidopsis_halleri	g09709.t1	67.8261	61.7391
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	94.9438	91.573	arabidopsis_halleri	g09706.t1	86.2245	83.1633
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	74.1573	57.8652	ostreococcus_lucimarinus	ABO96514	66	51.5
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.5955	triticum_dicoccoides	TRIDC7BG002060.3	74.1294	65.1741
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	72.4719	triticum_dicoccoides	TRIDC7AG013740.4	71.2919	61.7225
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	85.9551	77.5281	daucus_carota	KZM93810	77.2727	69.697
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	32.5843	26.9663	daucus_carota	KZN04531	40.8451	33.8028
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	73.5955	digitaria_exilis	Dexi4A01G0004240.1:cds	68.1818	59.5455
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.2697	73.5955	digitaria_exilis	Dexi4B01G0006660.1:cds	75.3769	65.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	79.2135	67.9775	nymphaea_colorata	NC9G0112890.1:cds	64.6789	55.5046
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	94.9438	89.3258	camelina_sativa	Csa06g052670.1	64.751	60.9195
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	78.0899	camelina_sativa	Csa04g065270.1	84.6591	78.9773
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	94.9438	89.3258	camelina_sativa	Csa06g037730.1	86.2245	81.1225
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	94.9438	89.3258	camelina_sativa	Csa05g002980.1	86.2245	81.1225
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	81.4607	67.9775	selaginella_moellendorffii	EFJ12146	72.5	60.5
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	81.4607	67.9775	selaginella_moellendorffii	EFJ29386	66.8203	55.7604
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	91.573	82.0225	brassica_rapa_ro18	A05p002720.1_BraROA.1	80.2956	71.9212
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	73.5955	eragrostis_tef	Et_2B_020721.CDS	69.953	61.5023
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.7079	74.1573	eragrostis_tef	Et_2A_016556.CDS	73.399	65.0246
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.8315	75.2809	leersia_perrieri	LPERR08G12210.1	75.8794	67.3367
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	84.8315	73.5955	panicum_hallii	PUZ62105	75.8794	65.8291
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	76.9663	actinidia_chinensis	PSS03983	78.7879	69.1919
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	76.9663	actinidia_chinensis	PSS24242	78.7879	69.1919
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	72.4719	aegilops_tauschii	AET7Gv20298800.1	62.1849	54.2017
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	33.1461	25.8427	olea_europaea	OE9A089285C1	53.6364	41.8182
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	75.8427	olea_europaea	OE9A098456C2	62.1514	53.7849
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	26.4045	25.8427	olea_europaea	OE9A115724C1	94	92
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	87.6404	75.8427	olea_europaea	OE9A014302C1	62.1514	53.7849
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	82.5843	73.0337	echinochloa_crusgalli	scaffold367.4.cds	73.8693	65.3266
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	82.5843	72.4719	echinochloa_crusgalli	scaffold10.324.cds	74.2424	65.1515
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	82.5843	72.4719	echinochloa_crusgalli	scaffold34.443.cds	69.0141	60.5634
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	73.0337	oryza_nivara	ONIVA06G05240.1	70.8134	62.201
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	83.1461	74.1573	trifolium_pratense	Tp57577_TGAC_v2_mRNA4858	74.7475	66.6667
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	78.0899	66.8539	quercus_suber	cds-POE98170.1	74.7312	63.9785
fgenesh1_pm.C_scaffold_4002334	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_4002334	78.6517	66.8539	quercus_suber	cds-POE51273.1	76.5027	65.0273

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression