RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	fgenesh1_pg.C_scaffold_8001667	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	SRP19
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	fgenesh1_pg.C_scaffold_8001667	438	145aa	fgenesh1_pg.C_scaffold_8001667

Gene Model

Click here to download fgenesh1_pg.C_scaffold_8001667's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download fgenesh1_pg.C_scaffold_8001667's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	Al_scaffold_0001_4097	100	98.6207	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	100	98.6207

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	57.2414	37.931	chondrus_crispus	CDF32415	51.5528	34.1615
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	62.069	44.8276	chlamydomonas_reinhardtii	PNW86683	60	43.3333
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	60.6897	marchantia_polymorpha	PTQ49042	75	62.8571
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	65.5172	papaver_somniferum	RZC72841	75	64.1892
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	66.2069	papaver_somniferum	RZC58983	70.4403	60.3774
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	71.0345	cannabis_sativa_female	cds.novel_model_6501_5bd9a17a	84.4444	76.2963
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	69.6552	ficus_carica	FCD_00034799-RA:cds	85.1852	74.8148
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.1724	63.4483	beta_vulgaris	KMS98618	80.1471	67.6471
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	68.9655	cucumis_melo	MELO3C006747.2.1	61.7021	53.1915
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	68.9655	cucumis_sativus	KGN57200	57.2139	49.7512
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	60	53.7931	cucumis_sativus	KGN54336	76.3158	68.4211
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	71.0345	populus_trichocarpa	Potri.012G045500.5.v4.1	84.5588	75.7353
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80.6897	73.1034	populus_trichocarpa	Potri.015G036700.5.v4.1	86.0294	77.9412
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	68.2759	citrullus_lanatus	Cla97C04G074070.1	83.7037	73.3333
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	69.6552	citrullus_lanatus	Cla97C05G088450.1	85.9259	74.8148
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	100	97.931	arabidopsis_thaliana	AT1G48160.1	100	97.931
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	71.0345	prunus_dulcis	VVA15135	83.8235	75.7353
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	96.5517	87.5862	brassica_napus	CDY41855	95.8904	86.9863
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	67.5862	61.3793	brassica_napus	CDY72141	89.0909	80.9091
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	97.2414	87.5862	brassica_napus	CDX77340	96.5753	86.9863
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	68.2759	malus_domestica_golden	mRNA:MD13G0128400	54.2453	46.6981
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	71.0345	prunus_persica	ONH91265	83.8235	75.7353
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	96.5517	87.5862	brassica_juncea	cds.BjuA08g04410S	95.8904	86.9863
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	96.5517	90.3448	brassica_juncea	cds.BjuB07g06650S	88.6076	82.9114
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	96.5517	88.9655	brassica_juncea	cds.BjuA05g18130S	96.5517	88.9655
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	60.6897	51.0345	cajanus_cajan	C.cajan_11183.t	72.1311	60.6557
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	64.8276	cajanus_cajan	C.cajan_11186.t	82.6087	68.1159
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	65.5172	glycine_max	KRH08388	84.6715	69.3431
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	65.5172	glycine_max	KRH70048	82.4818	69.3431
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	63.4483	lupinus_angustifolius	OIV95288	83.2117	67.1533
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	64.8276	lupinus_angustifolius	OIW00173	83.0882	69.1176
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	65.5172	phaseolus_vulgaris	ESW23741	83.2117	69.3431
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	64.1379	phaseolus_vulgaris	ESW23742	83.2117	67.8832
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	64.1379	medicago_truncatula	KEH23892	82.6087	67.3913
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	56.5517	48.2759	vigna_angularis	KOM55858	86.3158	73.6842
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	64.1379	pisum_sativum	Psat0ss1196g0480.1.cds	32.4561	27.193
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	65.5172	vigna_radiata	Vradi01g09300.1	60.4167	49.4792
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	64.1379	vigna_radiata	Vradi01g09280.1	50.8929	41.5179
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80.6897	65.5172	vigna_unguiculata	Vigun04g103700.1.v1.2	85.4015	69.3431
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	64.8276	vigna_unguiculata	Vigun05g052600.1.v1.2	83.9416	68.6131
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	68.9655	manihot_esculenta	OAY24438	83.0882	73.5294
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	66.2069	capsicum_annuum	PHT92207	82.2222	71.1111
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.8621	65.5172	solanum_tuberosum	PGSC0003DMT400031635	81.4815	70.3704
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	68.2759	sesamum_indicum	SIN_1015648.t	84.4444	73.3333
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	64.8276	lactuca_sativa	cds-PLY64873.1	82.3529	69.1176
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.7931	62.7586	helianthus_annuus	mRNA:HanXRQr2_Chr17g0780381	78.1022	66.4234
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	66.8966	helianthus_annuus	mRNA:HanXRQr2_Chr06g0241681	81.0219	70.8029
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	52.4138	40.6897	avena_sativa_sang	AVESA.00010b.r2.6AG1014790.1.CDS	73.0769	56.7308
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	70.3448	55.8621	avena_sativa_sang	AVESA.00010b.r2.4CG1288550.1.CDS	72.8571	57.8571
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	71.0345	54.4828	avena_sativa_sang	AVESA.00010b.r2.7AG1245530.1.CDS	73.0496	56.0284
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	71.0345	55.1724	avena_sativa_sang	AVESA.00010b.r2.7DG1362320.1.CDS	73.0496	56.7376
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	53.1034	40.6897	avena_sativa_ot3098	cds.AVESA.00001b.r3.7Ag0002829.1	48.125	36.875
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	71.7241	57.2414	avena_sativa_ot3098	cds.AVESA.00001b.r3.6Ag0000386.1	75.3623	60.1449
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	70.3448	55.8621	avena_sativa_ot3098	cds.AVESA.00001b.r3.4Cg0001784.1	50.495	40.099
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	71.0345	55.1724	avena_sativa_ot3098	cds.AVESA.00001b.r3.7Dg0001847.1	49.5192	38.4615
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	55.1724	44.1379	oryza_longistaminata	KN540926.1_FGP001	76.1905	60.9524
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_rufipogon	ORUFI06G14720.1	57.732	45.8763
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	57.2414	lolium_perenne	cds.KYUSt_chr6.23112	75.1773	58.8652
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	71.0345	55.1724	lolium_perenne	cds.KYUSt_chr7.14675	74.1007	57.554
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	62.7586	oryza_brachyantha	OB06G21980.1	79.5775	64.0845
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	62.069	oryza_punctata	OPUNC06G13060.1	81.7518	65.6934
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_glaberrima	ORGLA06G0123400.1	82.3529	65.4412
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	55.8621	secale_cereale	SECCE7Rv1G0497150.1	74.4681	57.4468
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	62.069	setaria_viridis	TKW21531	79.2857	64.2857
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	62.069	setaria_italica	KQL10697	79.2857	64.2857
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	56.5517	triticum_urartu	TuG1812G0700003583.01.T01	77.3723	59.854
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	56.5517	triticum_urartu	TuG1812S0002443900.01.T01	77.3723	59.854
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.1724	59.3103	zea_mays	Zm00001eb066670_P001	74.6575	58.9041
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.1724	59.3103	zea_mays	Zm00001eb081370_P001	74.6575	58.9041
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	56.5517	triticum_turgidum	TRITD7Av1G177380.1	77.3723	59.854
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	55.8621	triticum_turgidum	TRITD7Bv1G139000.1	74.4681	57.4468
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	81.3793	68.2759	ananas_comosus	Aco022053.1.mrna1	86.7647	72.7941
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	55.8621	triticum_aestivum	TraesCS7B02G245200.1	74.4681	57.4468
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	56.5517	triticum_aestivum	TraesCS7A02G333600.1	77.3723	59.854
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	55.8621	triticum_aestivum	TraesCS7D02G341200.1	74.4681	57.4468
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	52.4138	35.8621	caenorhabditis_elegans	F37F2.2.1	53.5211	36.6197
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	62.069	sorghum_bicolor	EES10907	80.1418	63.8298
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	63.4483	asparagus_officinalis	ONK66685	81.7518	67.1533
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	55.8621	41.3793	homo_sapiens	ENSP00000424870	56.25	41.6667
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	65.5172	amborella_trichopoda	ERN06556	81.6176	69.8529
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	60	50.3448	corylus_avellana	Cav06g12980.t1	60.8392	51.049
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	50.3448	43.4483	corylus_avellana	Cav03g13060.t1	83.908	72.4138
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	81.3793	71.0345	vitis_vinifera	Vitvi05g00231_P001	55.6604	48.5849
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	70.3448	vitis_vinifera	Vitvi05g04071_P001	85.9259	75.5556
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	51.0345	36.5517	drosophila_melanogaster	FBpp0076589	46.25	33.125
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	69.6552	ipomoea_triloba	itb12g17930.t2	82.2695	71.6312
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.7931	59.3103	brachypodium_distachyon	KQJ83188	77.5362	62.3188
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	58.6207	brachypodium_distachyon	KQJ83195	76.8116	61.5942
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_sativa	Os06t0342100-01	82.3529	65.4412
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_meridionalis	OMERI06G15240.1	59.893	47.5936
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.1724	61.3793	eragrostis_curvula	TVU09029	78.4173	64.0288
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	74.4828	60.6897	eragrostis_curvula	TVU03144	77.6978	63.3094
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.7931	61.3793	physcomitrium_patens	Pp3c3_17800V3.4	75.3521	62.6761
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	82.069	69.6552	gossypium_raimondii	KJB68233	86.8613	73.7226
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	68.9655	prunus_avium	Pav_sc0001685.1_g140.1.mk:mrna	83.0882	73.5294
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_glumipatula	OGLUM06G14710.1	82.3529	65.4412
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	66.8966	coffea_canephora	CDP04630	84.4444	71.8519
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	69.6552	theobroma_cacao	EOY27488	85.9259	74.8148
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	65.5172	fraxinus_excelsior	FRAEX38873_v2_000117360.1.cds	82.2222	70.3704
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_indica	BGIOSGA021297-PA	82.3529	65.4412
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	64.1379	cynara_cardunculus	KVH91783	83.0882	68.3824
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	71.7241	juglans_regia	cds.Jr07_12500_p1	77.8523	69.7987
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	62.7586	saccharum_spontaneum	Sspon.05G0010320-4D-mRNA-1:cds	80.7143	65
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	62.069	saccharum_spontaneum	Sspon.06G0007370-1A-mRNA-1:cds	58.8542	46.875
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	62.7586	saccharum_spontaneum	Sspon.05G0010320-1A-mRNA-1:cds	81.8841	65.942
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	62.069	saccharum_spontaneum	Sspon.05G0010320-2B-mRNA-1:cds	80	64.2857
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	58.6207	48.9655	pistacia_vera	cds-EVM0027800.1	72.6496	60.6838
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	82.069	71.7241	pistacia_vera	cds-EVM0004444.1	87.5	76.4706
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	74.4828	62.7586	chenopodium_quinoa	AUR62002533-RA:cds	79.4118	66.9118
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.1724	62.7586	chenopodium_quinoa	AUR62023660-RA:cds	80.1471	66.9118
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	64.1379	50.3448	chara_braunii	GBG84648	68.8889	54.0741
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80.6897	69.6552	citrus_clementina	ESR32509	86.0294	74.2647
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	98.6207	93.7931	eutrema_salsugineum	ESQ30759	74.8691	71.2042
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	50.3448	26.8966	saccharomyces_cerevisiae	YML105C	26.7399	14.2857
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_barthii	OBART06G13830.1	61.5385	48.9011
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	62.7586	dioscorea_rotundata	DRNTG_34978.1	83.0882	66.9118
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.8621	64.8276	corymbia_citriodora	cds-KAF7851457.1	81.4815	69.6296
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	65.5172	corymbia_citriodora	cds-KAF8020050.1	82.963	70.3704
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	62.7586	musa_acuminata	Ma10_p02560.1	77.3723	66.4234
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	65.5172	musa_acuminata	Ma08_p21350.1	81.6176	69.8529
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	66.2069	rosa_chinensis	PRQ39580	82.2222	71.1111
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	56.5517	hordeum_vulgare	HORVU.MOREX.r3.7HG0711810.2	75	58.5714
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	85.5172	73.7931	brassica_oleracea	Bo5g072460.1	59.9034	51.6908
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	97.2414	87.5862	brassica_oleracea	Bo8g016390.1	96.5753	86.9863
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	91.0345	86.2069	brassica_oleracea	Bo6g010960.1	96.3504	91.2409
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80.6897	71.7241	quercus_lobata	QL06p013825:mrna	86.6667	77.037
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	68.2759	corchorus_capsularis	OMO70455	83.3333	71.7391
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	75.1724	64.8276	kalanchoe_fedtschenkoi	Kaladp0089s0109.1.v1.1	81.3433	70.1493
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	99.3103	98.6207	arabidopsis_halleri	g17460.t1	99.3103	98.6207
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	55.8621	triticum_dicoccoides	TRIDC7BG040400.1	56.7568	43.7838
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	56.5517	triticum_dicoccoides	TRIDC7AG047310.1	56.383	43.617
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	78.6207	66.2069	daucus_carota	KZN05673	84.4444	71.1111
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	53.7931	44.1379	digitaria_exilis	Dexi6B01G0000790.1:cds	76.4706	62.7451
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	62.7586	digitaria_exilis	Dexi7B01G0019310.1:cds	75.6757	61.4865
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	73.1034	59.3103	nymphaea_colorata	NC2G0010140.1:cds	53.5354	43.4343
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	98.6207	93.7931	camelina_sativa	Csa03g052890.1	98.6207	93.7931
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	98.6207	93.1034	camelina_sativa	Csa17g076640.1	98.6207	93.1034
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	98.6207	93.7931	camelina_sativa	Csa14g053100.1	98.6207	93.7931
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	64.1379	50.3448	selaginella_moellendorffii	EFJ06969	66.4286	52.1429
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	64.1379	50.3448	selaginella_moellendorffii	EFJ09089	66.4286	52.1429
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	96.5517	87.5862	brassica_rapa_ro18	A08p006210.1_BraROA.1	95.8904	86.9863
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	95.8621	88.9655	brassica_rapa_ro18	A05p025670.1_BraROA.1	73.545	68.254
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	74.4828	60	eragrostis_tef	Et_2B_020654.CDS	77.6978	62.5899
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	76.5517	61.3793	eragrostis_tef	Et_2A_016617.CDS	78.7234	63.1206
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	leersia_perrieri	LPERR05G12820.1	48.6957	38.6957
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	leersia_perrieri	LPERR07G14450.1	57.4359	45.641
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	58.6207	44.1379	panicum_hallii	PUZ75218	68.5484	51.6129
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	62.7586	panicum_hallii	PUZ60938	80	65
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	68.9655	actinidia_chinensis	PSR92460	84.5588	73.5294
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	79.3103	68.2759	actinidia_chinensis	PSR97852	84.5588	72.7941
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	72.4138	55.8621	aegilops_tauschii	AET7Gv20850000.2	47.5113	36.6516
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.931	66.8966	olea_europaea	OE9A053963C1	83.7037	71.8519
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	53.7931	43.4483	echinochloa_crusgalli	scaffold93.239.cds	72.8972	58.8785
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	60.6897	echinochloa_crusgalli	scaffold181.3.cds	80	62.8571
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	echinochloa_crusgalli	scaffold38.320.cds	17.5	13.9062
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	77.2414	61.3793	oryza_nivara	ONIVA06G16560.1	82.3529	65.4412
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	68.2759	57.2414	trifolium_pratense	Tp57577_TGAC_v2_mRNA41006	83.8983	70.339
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80.6897	64.8276	trifolium_pratense	Tp57577_TGAC_v2_mRNA12974	84.7826	68.1159
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	58.6207	46.8966	trifolium_pratense	Tp57577_TGAC_v2_mRNA16666	70.2479	56.1983
fgenesh1_pg.C_scaffold_8001667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_8001667	80	71.0345	quercus_suber	cds-POE79155.1	85.9259	76.2963

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression