RBPWorld - a comprehensive database of RNA Binding Proteins

RBP Type	N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq

Description

Ensembl ID	fgenesh1_pg.C_scaffold_2001875	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	PseudoU_synth_2 , S4
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	fgenesh1_pg.C_scaffold_2001875	2793	930aa	fgenesh1_pg.C_scaffold_2001875

Gene Model

Click here to download fgenesh1_pg.C_scaffold_2001875's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download fgenesh1_pg.C_scaffold_2001875's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_602539.1	47.4832	32.047	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	30.4301	20.5376
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.5__1288__AT3G49370.1	46.9595	31.4189	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	29.8925	20
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0003_2654	48.5981	17.757	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	5.5914	2.04301
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0003_2644	49.5327	18.6916	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	5.69892	2.15054
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.5__1393__AT3G50530.1	50.5863	33.3333	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	32.4731	21.3979
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0003_2647	46.4912	16.6667	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	5.69892	2.04301
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.1__4047__AT1G49580.1	48.1908	33.0592	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.5054	21.6129
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_93900001.1	59.2326	39.0887	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	26.5591	17.5269
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_302254.1	49	32.8333	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.6129	21.1828
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0003_2649	51.4019	19.6262	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	5.91398	2.25806
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.3__1101__AT3G10660.1	58.1649	44.9456	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	40.2151	31.0753
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0003_2842	69.378	54.7847	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.1828	24.6237
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_4001663	59.5057	42.5856	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	33.6559	24.086
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_600433.1	60.6557	46.2295	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	39.7849	30.3226
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.3__410__AT3G04530.1	57.9137	39.5683	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	17.3118	11.828
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_100894.1	56.6901	36.9718	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	17.3118	11.2903
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.5__1532__AT3G51850.1	63.447	44.697	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	36.0215	25.3763
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.4__2894__AT2G46700.1	46.7227	31.2605	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	29.8925	20
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_401686.1	57.732	40.2062	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	36.129	25.1613
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.4__2329__AT2G41860.2	61.2053	43.1262	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	34.9462	24.6237
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.6__1969__AT5G19450.2	65.1032	45.591	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	37.3118	26.129
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.6__1231__AT5G12480.1	64.2991	45.9813	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	36.9892	26.4516
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_502926.1	60.9665	42.9368	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	35.2688	24.8387
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.6__2943__AT4G09570.1	70.8583	54.2914	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	38.172	29.2473
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_602431.1	72.5971	55.6237	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	38.172	29.2473
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0001_3687	71.9192	55.3535	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	38.2796	29.4624
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.7__1936__AT4G23650.1	73.9884	56.6474	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	41.2903	31.6129
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.1__1373__AT1G12680.1	48.2979	31.7021	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	24.4086	16.0215
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.1__1361__AT1G12580.1	44.636	30.4598	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	25.0538	17.0968
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0007_15	74.3802	55.7851	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	38.7097	29.0323
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.3__3315__AT2G17290.1	68.231	51.2635	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	40.6452	30.5376
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.7__549__AT4G35310.1	66.7939	48.855	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	37.6344	27.5269
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_102114.1	61.8081	45.203	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	36.0215	26.3441
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.2__1741__AT1G74740.1	61.7375	44.5471	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	35.914	25.914
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.5__2107__AT3G56760.1	50.9532	32.9289	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.6129	20.4301
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.4__2242__AT2G41140.1	50.7799	32.5823	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.5054	20.2151
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_7000373	54.8689	37.4532	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.5054	21.5054
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.8__2805__AT5G66210.2	55.364	39.272	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.0753	22.043
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0003_3749	51.5901	36.3958	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.3979	22.1505
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_603789.1	73.8318	57.1963	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	42.4731	32.9032
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_702198.1	73.8182	59.0909	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	43.6559	34.9462
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	Al_scaffold_0002_329	71.7902	58.047	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	42.6882	34.5161
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_302426.1	77.2643	62.8466	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.9462	36.5591
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.6__3244__AT4G04720.1	76.4045	61.7978	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	43.871	35.4839
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.6__3243__AT4G04710.1	73.3333	55.7576	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	39.0323	29.6774
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_600069.1	53.7975	36.076	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	9.13978	6.12903
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.1__4156__AT1G50700.1	79.0787	64.2994	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.3011	36.0215
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	scaffold_702191.1	42.1965	32.1387	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	39.2473	29.8925
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_6002983	75.6198	56.1983	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	39.3548	29.2473
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_7001740	84.8485	67.4242	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	36.129	28.7097
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_4002010	63.3106	46.4164	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	39.8925	29.2473
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh2_kg.6__1194__AT5G12180.1	71.6981	55.4717	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	40.8602	31.6129
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pm.C_scaffold_6001554	72.7619	56.381	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	41.0753	31.828

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.2796	41.7204	papaver_somniferum	RZC66791	85.1992	73.6243
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.2796	41.9355	papaver_somniferum	RZC44991	84.717	73.5849
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	49.2473	41.3979	cannabis_sativa_female	cds.evm.model.01.2352	82.821	69.6203
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.8064	38.6021	cannabis_sativa_female	cds.evm.model.01.2350	84.6918	71.3718
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.3871	40.4301	ficus_carica	FCD_00003602-RA:cds	85.2273	71.2121
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.6344	39.8925	beta_vulgaris	KMS95385	82.9588	69.4757
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	38.0645	cucumis_melo	MELO3C003730.2.1	82.9746	69.2759
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.5591	38.6021	cucumis_sativus	KGN60062	81.6981	67.7358
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.8495	41.3979	populus_trichocarpa	Potri.002G017000.1.v4.1	82.1033	71.0332
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.6667	39.1398	citrullus_lanatus	Cla97C05G096490.1	84.1085	70.5426
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	55.914	54.3011	arabidopsis_thaliana	AT1G76040.2	92.6916	90.0178
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	49.3548	42.4731	prunus_dulcis	VVA25791	85.9551	73.97
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	53.7634	50.6452	brassica_napus	CDX73219	90.5797	85.3261
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	53.871	50.8602	brassica_napus	CDY66815	90.7609	85.6884
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.8495	40.6452	malus_domestica_golden	mRNA:MD15G0006200	84.4402	71.7268
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	49.3548	42.2581	prunus_persica	ONI32306	85.9551	73.5955
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.9892	39.5699	cajanus_cajan	C.cajan_30599.t	83.7165	70.4981
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.3118	39.7849	glycine_max	KRH17481	81.9367	68.9013
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	19.2473	15.6989	lupinus_angustifolius	OIW06237	78.8546	64.3172
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.0645	39.6774	lupinus_angustifolius	OIW06238	84.4991	69.7542
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	43.2258	33.4409	phaseolus_vulgaris	ESW32618	78.6693	60.8611
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	19.5699	15.5914	medicago_truncatula	KEH40239	77.7778	61.9658
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.914	37.7419	vigna_angularis	KOM49053	81.6444	67.1128
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	41.9355	35.0538	vigna_angularis	KOM49054	85.3392	71.3348
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.2043	39.5699	vigna_unguiculata	Vigun08g003100.1.v1.2	82.2097	68.9139
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	59.7849	50.9677	solanum_lycopersicum	Solyc04g081920.3.1	54.5098	46.4706
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.6021	41.5054	manihot_esculenta	OAY22579	86.0952	73.5238
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.0645	41.1828	capsicum_annuum	PHT84987	83.8649	71.8574
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.9247	41.9355	solanum_tuberosum	PGSC0003DMT400025581	84.2593	72.2222
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.4946	42.4731	sesamum_indicum	SIN_1005792.t	86.0687	75.3817
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.8495	39.7849	lactuca_sativa	cds-PLY83975.1	83.1776	69.1589
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	18.9247	15.3763	helianthus_annuus	CDS:HanXRQr2_Chr13g0565421.1	80.7339	65.5963
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.5269	39.3548	helianthus_annuus	mRNA:HanXRQr2_Chr12g0538681	82.4627	68.2836
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	39.7849	29.7849	avena_sativa_sang	AVESA.00010b.r2.2DG0400250.1.CDS	48.3029	36.1619
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.1613	37.2043	avena_sativa_sang	AVESA.00010b.r2.2DG0369470.1.CDS	78.2123	64.432
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.2688	37.0968	avena_sativa_sang	AVESA.00010b.r2.2CG0313240.1.CDS	78.3985	64.2458
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.9462	36.8817	avena_sativa_sang	AVESA.00010b.r2.2AG0233950.1.CDS	77.8399	63.8734
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	42.1505	31.3979	avena_sativa_ot3098	cds.AVESA.00001b.r3.7Ag0001293.1	47.4576	35.3511
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.9462	36.8817	avena_sativa_ot3098	cds.AVESA.00001b.r3.2Ag0001790.1	74.9104	61.4695
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.1613	36.9892	avena_sativa_ot3098	cds.AVESA.00001b.r3.2Cg0002493.1	70.4698	57.7181
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.1613	37.2043	avena_sativa_ot3098	cds.AVESA.00001b.r3.2Dg0001713.4	76.225	62.7949
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	42.1505	34.4086	oryza_longistaminata	KN538977.1_FGP013	80.8247	65.9794
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.8387	36.0215	oryza_rufipogon	ORUFI04G23110.2	75.6806	60.7985
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	17.0968	13.1183	lolium_perenne	cds.KYUSt_chr7.31013	65.1639	50
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	21.3979	17.0968	lolium_perenne	cds.KYUSt_chr7.31015	68.1507	54.4521
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	42.3656	34.6237	lolium_perenne	cds.KYUSt_chr2.46243	84.5494	69.0987
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	34.3011	27.7419	oryza_brachyantha	OB04G28580.1	82.6425	66.8394
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	40.2151	32.2581	oryza_punctata	OPUNC04G19240.1	69.6462	55.8659
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	17.957	14.3011	oryza_punctata	OPUNC04G19270.1	68.4426	54.5082
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	21.3979	17.5269	oryza_punctata	OPUNC04G19250.1	80.2419	65.7258
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.9462	36.129	oryza_glaberrima	ORGLA04G0186200.1	78.424	63.0394
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.914	37.8495	secale_cereale	SECCE2Rv1G0116340.1	79.9625	65.9176
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.4839	36.4516	setaria_viridis	TKW05948	79.2135	63.4831
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.4839	36.5591	setaria_italica	KQK98445	79.2135	63.6704
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	37.6344	triticum_urartu	TuG1812G0200004687.01.T01	78.6642	64.9351
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.4086	34.9462	zea_mays	Zm00001eb429270_P001	69.6459	54.8061
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	37.6344	triticum_turgidum	TRITD2Av1G239850.1	78.6642	64.9351
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	37.7419	triticum_turgidum	TRITD2Bv1G201610.1	78.9572	65.3631
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.5269	39.5699	ananas_comosus	Aco011994.1.mrna1	84.6743	70.4981
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	37.7419	triticum_aestivum	TraesCS2B02G424900.1	78.9572	65.3631
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	37.6344	triticum_aestivum	TraesCS2A02G407200.1	78.6642	64.9351
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.4839	37.7419	triticum_aestivum	TraesCS2D02G404200.1	79.2135	65.7303
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.3763	36.3441	sorghum_bicolor	EES12651	79.1745	63.4146
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.9892	39.7849	asparagus_officinalis	ONK72672	85.8546	72.6916
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	9.89247	6.77419	vitis_vinifera	Vitvi18g00174_P001	61.3333	42
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.3763	37.3118	ipomoea_triloba	itb08g03030.t1	80.6883	66.348
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.5591	39.8925	ipomoea_triloba	itb06g19660.t1	84.902	72.7451
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.4839	36.6667	brachypodium_distachyon	KQJ84031	78.1885	63.0314
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.8387	36.0215	oryza_sativa	Os04t0560600-01	78.2364	62.8518
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.3441	36.5591	oryza_meridionalis	OMERI04G17980.1	26.058	20.5562
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.914	36.8817	eragrostis_curvula	TVU14899	78.7823	63.2841
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	41.0753	30.4301	eragrostis_curvula	TVU15236	29.2945	21.7025
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.4194	40.5376	gossypium_raimondii	KJB63479	83.8403	71.673
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	56.2366	48.6021	gossypium_raimondii	KJB58044	59.9084	51.7755
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	49.5699	41.5054	prunus_avium	Pav_sc0000085.1_g120.1.mk:mrna	40.3678	33.8004
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.9462	36.129	oryza_glumipatula	OGLUM04G21570.2	75.8621	60.98
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.6667	39.6774	nicotiana_attenuata	OIT26137	85.098	72.3529
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.9247	41.9355	nicotiana_attenuata	OIT03964	83.3333	71.4286
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.9892	40.3226	coffea_canephora	CDP07348	81.8352	70.2247
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.6667	39.8925	theobroma_cacao	EOY15122	82.3529	70.3985
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.3441	39.5699	theobroma_cacao	EOY15124	83.5271	71.3178
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	16.2366	13.2258	fraxinus_excelsior	FRAEX38873_v2_000356820.1.cds	84.8315	69.1011
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	31.3979	27.4194	fraxinus_excelsior	FRAEX38873_v2_000398930.2.cds	82.2535	71.831
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.8387	36.0215	oryza_indica	BGIOSGA014554-PA	78.2364	62.8518
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	49.6774	40.3226	cynara_cardunculus	KVI05186	80.3478	65.2174
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	39.8925	31.5054	saccharum_spontaneum	Sspon.05G0005370-2B-mRNA-1:cds	77.2917	61.0417
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	43.9785	35.0538	saccharum_spontaneum	Sspon.07G0016900-2C-mRNA-1:cds	69.322	55.2542
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	40.8602	32.4731	saccharum_spontaneum	Sspon.05G0005360-2D-mRNA-1:cds	72.1063	57.3055
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	11.2903	9.13978	pistacia_vera	cds-EVM0001906.1	75.5396	61.1511
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	53.5484	51.0753	arabis_alpina	KFK42039	94.8571	90.4762
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.5161	37.3118	eucalyptus_grandis	KCW68003	78.2609	65.5955
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	26.0215	21.6129	eucalyptus_grandis	KCW45109	82.3129	68.3673
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	43.5484	35.6989	eucalyptus_grandis	KCW68006	82.9918	68.0328
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.5269	42.3656	citrus_clementina	ESR48493	85.9922	76.6537
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	53.7634	51.3979	eutrema_salsugineum	ESQ27531	90.0901	86.1261
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	41.828	34.3011	oryza_barthii	OBART04G21540.2	79.3878	65.102
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.8064	38.3871	corymbia_citriodora	cds-KAF8022664.1	81.2977	68.1298
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	33.4409	26.9892	musa_acuminata	Ma04_p22080.1	83.1551	67.1123
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	8.27957	6.45161	musa_acuminata	Ma04_p22110.1	90.5882	70.5882
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.7097	41.828	rosa_chinensis	PRQ27276	84.8315	72.8464
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.3763	37.0968	hordeum_vulgare	HORVU.MOREX.r3.2HG0188200.1	77.8598	63.6531
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	53.6559	50.5376	brassica_oleracea	Bo6g120040.1	90.3986	85.1449
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	32.5806	27.0968	quercus_lobata	QL02p012818:mrna	80.8	67.2
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.8817	39.6774	quercus_lobata	QL02p012856:mrna	82.1092	69.4915
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	12.5806	9.89247	quercus_lobata	QL02p012835:mrna	81.25	63.8889
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	43.9785	38.0645	corchorus_capsularis	OMO87356	84.5041	73.1405
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.9892	39.3548	kalanchoe_fedtschenkoi	Kaladp0003s0080.1.v1.1	84.2004	70.5202
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	56.0215	54.7312	arabidopsis_halleri	g01154.t1	97.9323	95.6767
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	37.6344	triticum_dicoccoides	TRIDC2AG058740.3	78.6642	64.9351
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.5914	37.8495	triticum_dicoccoides	TRIDC2BG061760.2	78.9572	65.5493
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	51.2903	42.6882	daucus_carota	KZN00756	78.7129	65.5116
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	30.1075	23.871	digitaria_exilis	Dexi7B01G0016140.1:cds	74.0741	58.7302
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	41.3979	33.6559	digitaria_exilis	Dexi7A01G0015400.1:cds	77.9352	63.3603
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	54.8387	53.4409	camelina_sativa	Csa07g047530.1	95.6848	93.2458
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	55.1613	53.6559	camelina_sativa	Csa16g040150.1	82.3435	80.0963
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	55.0538	53.5484	camelina_sativa	Csa09g080730.1	96.06	93.4334
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	50.5376	47.7419	brassica_rapa_ro18	A07p048600.1_BraROA.1	90.3846	85.3846
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	46.0215	36.6667	eragrostis_tef	Et_7B_054972.CDS	79.5539	63.3829
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.4839	36.129	eragrostis_tef	Et_7A_052314.CDS	75.1332	59.6803
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	42.3656	31.5054	eragrostis_tef	Et_7A_051349.CDS	54.8747	40.8078
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.1613	36.2366	leersia_perrieri	LPERR04G17590.1	77.7778	62.4074
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	42.6882	34.4086	panicum_hallii	PUZ48421	85.0107	68.5225
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.7419	41.3979	actinidia_chinensis	PSS31221	84.5714	73.3333
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	48.2796	41.2903	actinidia_chinensis	PSR99553	84.5574	72.3164
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.4839	37.7419	aegilops_tauschii	AET2Gv20903100.3	79.2135	65.7303
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.4194	40.5376	olea_europaea	OE9A036551C2	82.5843	70.5993
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.4839	36.5591	echinochloa_crusgalli	scaffold14.26.cds	79.2135	63.6704
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.2688	36.6667	echinochloa_crusgalli	scaffold94.98.cds	78.5448	63.6194
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	45.6989	36.7742	echinochloa_crusgalli	scaffold49.406.cds	79.8872	64.2857
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	44.7312	35.8064	oryza_nivara	ONIVA04G20060.1	78.0488	62.4765
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.5269	38.3871	trifolium_pratense	Tp57577_TGAC_v2_mRNA27305	56.0203	45.2471
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	59.5699	49.6774	quercus_suber	cds-POE81995.1	61.8304	51.5625
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	7.63441	6.66667	quercus_suber	cds-POE82002.1	91.0256	79.4872
fgenesh1_pg.C_scaffold_2001875	arabidopsis_lyrata	fgenesh1_pg.C_scaffold_2001875	47.2043	39.0323	quercus_suber	cds-POE81996.1	82.6742	68.3616

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Welcome to

RBP World!

Functions and Diseases

Description

RNA binding domains (RBDs)

RNA binding proteomes (RBPomes)

Literatures on RNA binding capacity

Transcripts

Gene Model

Pathways

Phenotypes

GWAS

Protein-Protein Interaction (PPI)

Paralogs

Orthologs

Gene Ontology

Expression