RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	evm.TU.06.1371	Gene ID		Accession	-
Symbol		Alias	-	Full Name
Status	Confidence	Length		Strand
Position		RNA binding domain	Ribosomal_L27A
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	evm.model.06.1371.2.5bd9b13b	873	184aa	cds.evm.model.06.1371.2.5bd9b13b
-	evm.model.06.1371.1.5bd9b13b.1.5bdae6df	1090	170aa	cds.evm.model.06.1371.1.5bd9b13b.1.5bdae6df
-	evm.model.06.1371	996	187aa	cds.evm.model.06.1371
-	evm.model.06.1371.1.5bd9b13b	871	141aa	cds.evm.model.06.1371.1.5bd9b13b

Gene Model

Click here to download evm.TU.06.1371's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download evm.TU.06.1371's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
evm.TU.06.1371

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
evm.TU.06.1371

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression