Description

Ensembl ID Zm00001eb008750 Gene ID Accession -
Symbol Alias - Full Name Zm00001e000852
Status Confidence Length 5763 bases Strand Plus strand
Position 1 : 27008957 - 27014719 RNA binding domain PPR_3 , PPR_long , PPR
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Zm00001eb008750_P002 PPR_3 PF13812 7.2e-33 1
Zm00001eb008750_P002 PPR_3 PF13812 7.2e-33 2
Zm00001eb008750_P002 PPR_3 PF13812 7.2e-33 3
Zm00001eb008750_P002 PPR_3 PF13812 7.2e-33 4
Zm00001eb008750_P002 PPR_long PF17177 1.5e-13 5
Zm00001eb008750_P002 PPR PF01535 6.9e-55 6
Zm00001eb008750_P002 PPR PF01535 6.9e-55 7
Zm00001eb008750_P002 PPR PF01535 6.9e-55 8
Zm00001eb008750_P002 PPR PF01535 6.9e-55 9
Zm00001eb008750_P002 PPR PF01535 6.9e-55 10
Zm00001eb008750_P002 PPR PF01535 6.9e-55 11
Zm00001eb008750_P002 PPR PF01535 6.9e-55 12
Zm00001eb008750_P002 PPR PF01535 6.9e-55 13
Zm00001eb008750_P002 PPR PF01535 6.9e-55 14
Zm00001eb008750_P002 PPR PF01535 6.9e-55 15
Zm00001eb008750_P005 PPR_3 PF13812 7.2e-33 1
Zm00001eb008750_P005 PPR_3 PF13812 7.2e-33 2
Zm00001eb008750_P005 PPR_3 PF13812 7.2e-33 3
Zm00001eb008750_P005 PPR_3 PF13812 7.2e-33 4
Zm00001eb008750_P005 PPR_long PF17177 1.5e-13 5
Zm00001eb008750_P005 PPR PF01535 6.9e-55 6
Zm00001eb008750_P005 PPR PF01535 6.9e-55 7
Zm00001eb008750_P005 PPR PF01535 6.9e-55 8
Zm00001eb008750_P005 PPR PF01535 6.9e-55 9
Zm00001eb008750_P005 PPR PF01535 6.9e-55 10
Zm00001eb008750_P005 PPR PF01535 6.9e-55 11
Zm00001eb008750_P005 PPR PF01535 6.9e-55 12
Zm00001eb008750_P005 PPR PF01535 6.9e-55 13
Zm00001eb008750_P005 PPR PF01535 6.9e-55 14
Zm00001eb008750_P005 PPR PF01535 6.9e-55 15
Zm00001eb008750_P003 PPR_3 PF13812 7.3e-31 1
Zm00001eb008750_P003 PPR_3 PF13812 7.3e-31 2
Zm00001eb008750_P003 PPR_3 PF13812 7.3e-31 3
Zm00001eb008750_P003 PPR_3 PF13812 7.3e-31 4
Zm00001eb008750_P003 PPR_long PF17177 1.1e-13 5
Zm00001eb008750_P003 PPR PF01535 1.3e-55 6
Zm00001eb008750_P003 PPR PF01535 1.3e-55 7
Zm00001eb008750_P003 PPR PF01535 1.3e-55 8
Zm00001eb008750_P003 PPR PF01535 1.3e-55 9
Zm00001eb008750_P003 PPR PF01535 1.3e-55 10
Zm00001eb008750_P003 PPR PF01535 1.3e-55 11
Zm00001eb008750_P003 PPR PF01535 1.3e-55 12
Zm00001eb008750_P003 PPR PF01535 1.3e-55 13
Zm00001eb008750_P003 PPR PF01535 1.3e-55 14
Zm00001eb008750_P003 PPR PF01535 1.3e-55 15
Zm00001eb008750_P004 PPR_3 PF13812 7.3e-31 1
Zm00001eb008750_P004 PPR_3 PF13812 7.3e-31 2
Zm00001eb008750_P004 PPR_3 PF13812 7.3e-31 3
Zm00001eb008750_P004 PPR_3 PF13812 7.3e-31 4
Zm00001eb008750_P004 PPR_long PF17177 1.1e-13 5
Zm00001eb008750_P004 PPR PF01535 1.3e-55 6
Zm00001eb008750_P004 PPR PF01535 1.3e-55 7
Zm00001eb008750_P004 PPR PF01535 1.3e-55 8
Zm00001eb008750_P004 PPR PF01535 1.3e-55 9
Zm00001eb008750_P004 PPR PF01535 1.3e-55 10
Zm00001eb008750_P004 PPR PF01535 1.3e-55 11
Zm00001eb008750_P004 PPR PF01535 1.3e-55 12
Zm00001eb008750_P004 PPR PF01535 1.3e-55 13
Zm00001eb008750_P004 PPR PF01535 1.3e-55 14
Zm00001eb008750_P004 PPR PF01535 1.3e-55 15
Zm00001eb008750_P001 PPR_3 PF13812 4.5e-30 1
Zm00001eb008750_P001 PPR_3 PF13812 4.5e-30 2
Zm00001eb008750_P001 PPR_3 PF13812 4.5e-30 3
Zm00001eb008750_P001 PPR_3 PF13812 4.5e-30 4
Zm00001eb008750_P001 PPR_long PF17177 5.3e-12 5
Zm00001eb008750_P001 PPR PF01535 8.2e-48 6
Zm00001eb008750_P001 PPR PF01535 8.2e-48 7
Zm00001eb008750_P001 PPR PF01535 8.2e-48 8
Zm00001eb008750_P001 PPR PF01535 8.2e-48 9
Zm00001eb008750_P001 PPR PF01535 8.2e-48 10
Zm00001eb008750_P001 PPR PF01535 8.2e-48 11
Zm00001eb008750_P001 PPR PF01535 8.2e-48 12
Zm00001eb008750_P001 PPR PF01535 8.2e-48 13
Zm00001eb008750_P001 PPR PF01535 8.2e-48 14

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Zm00001eb008750

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Zm00001eb008750

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression