Description

Ensembl ID Zm00001eb005000 Gene ID Accession -
Symbol Alias - Full Name Zm00001e000493
Status Confidence Length 5994 bases Strand Plus strand
Position 1 : 13703133 - 13709126 RNA binding domain PPR_3 , PPR_long , PPR , MRP-S27
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 1
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 2
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 3
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 4
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 5
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 6
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 7
Zm00001eb005000_P001 PPR_3 PF13812 2.3e-74 8
Zm00001eb005000_P001 PPR_long PF17177 6.3e-38 9
Zm00001eb005000_P001 PPR_long PF17177 6.3e-38 10
Zm00001eb005000_P001 PPR PF01535 5.7e-102 11
Zm00001eb005000_P001 PPR PF01535 5.7e-102 12
Zm00001eb005000_P001 PPR PF01535 5.7e-102 13
Zm00001eb005000_P001 PPR PF01535 5.7e-102 14
Zm00001eb005000_P001 PPR PF01535 5.7e-102 15
Zm00001eb005000_P001 PPR PF01535 5.7e-102 16
Zm00001eb005000_P001 PPR PF01535 5.7e-102 17
Zm00001eb005000_P001 PPR PF01535 5.7e-102 18
Zm00001eb005000_P001 PPR PF01535 5.7e-102 19
Zm00001eb005000_P001 PPR PF01535 5.7e-102 20
Zm00001eb005000_P001 PPR PF01535 5.7e-102 21
Zm00001eb005000_P001 PPR PF01535 5.7e-102 22
Zm00001eb005000_P001 MRP-S27 PF10037 2.6e-14 23
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 1
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 2
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 3
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 4
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 5
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 6
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 7
Zm00001eb005000_P002 PPR_3 PF13812 2.3e-74 8
Zm00001eb005000_P002 PPR_long PF17177 6.3e-38 9
Zm00001eb005000_P002 PPR_long PF17177 6.3e-38 10
Zm00001eb005000_P002 PPR PF01535 5.7e-102 11
Zm00001eb005000_P002 PPR PF01535 5.7e-102 12
Zm00001eb005000_P002 PPR PF01535 5.7e-102 13
Zm00001eb005000_P002 PPR PF01535 5.7e-102 14
Zm00001eb005000_P002 PPR PF01535 5.7e-102 15
Zm00001eb005000_P002 PPR PF01535 5.7e-102 16
Zm00001eb005000_P002 PPR PF01535 5.7e-102 17
Zm00001eb005000_P002 PPR PF01535 5.7e-102 18
Zm00001eb005000_P002 PPR PF01535 5.7e-102 19
Zm00001eb005000_P002 PPR PF01535 5.7e-102 20
Zm00001eb005000_P002 PPR PF01535 5.7e-102 21
Zm00001eb005000_P002 PPR PF01535 5.7e-102 22
Zm00001eb005000_P002 MRP-S27 PF10037 2.6e-14 23
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 1
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 2
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 3
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 4
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 5
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 6
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 7
Zm00001eb005000_P003 PPR_3 PF13812 2.3e-74 8
Zm00001eb005000_P003 PPR_long PF17177 6.3e-38 9
Zm00001eb005000_P003 PPR_long PF17177 6.3e-38 10
Zm00001eb005000_P003 PPR PF01535 5.7e-102 11
Zm00001eb005000_P003 PPR PF01535 5.7e-102 12
Zm00001eb005000_P003 PPR PF01535 5.7e-102 13
Zm00001eb005000_P003 PPR PF01535 5.7e-102 14
Zm00001eb005000_P003 PPR PF01535 5.7e-102 15
Zm00001eb005000_P003 PPR PF01535 5.7e-102 16
Zm00001eb005000_P003 PPR PF01535 5.7e-102 17
Zm00001eb005000_P003 PPR PF01535 5.7e-102 18
Zm00001eb005000_P003 PPR PF01535 5.7e-102 19
Zm00001eb005000_P003 PPR PF01535 5.7e-102 20
Zm00001eb005000_P003 PPR PF01535 5.7e-102 21
Zm00001eb005000_P003 PPR PF01535 5.7e-102 22
Zm00001eb005000_P003 MRP-S27 PF10037 2.6e-14 23
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 1
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 2
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 3
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 4
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 5
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 6
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 7
Zm00001eb005000_P004 PPR_3 PF13812 2.3e-74 8
Zm00001eb005000_P004 PPR_long PF17177 6.3e-38 9
Zm00001eb005000_P004 PPR_long PF17177 6.3e-38 10
Zm00001eb005000_P004 PPR PF01535 5.7e-102 11
Zm00001eb005000_P004 PPR PF01535 5.7e-102 12
Zm00001eb005000_P004 PPR PF01535 5.7e-102 13
Zm00001eb005000_P004 PPR PF01535 5.7e-102 14
Zm00001eb005000_P004 PPR PF01535 5.7e-102 15
Zm00001eb005000_P004 PPR PF01535 5.7e-102 16
Zm00001eb005000_P004 PPR PF01535 5.7e-102 17
Zm00001eb005000_P004 PPR PF01535 5.7e-102 18
Zm00001eb005000_P004 PPR PF01535 5.7e-102 19
Zm00001eb005000_P004 PPR PF01535 5.7e-102 20
Zm00001eb005000_P004 PPR PF01535 5.7e-102 21
Zm00001eb005000_P004 PPR PF01535 5.7e-102 22
Zm00001eb005000_P004 MRP-S27 PF10037 2.6e-14 23

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Zm00001eb005000

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Zm00001eb005000

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression