Description

Ensembl ID YDR395W Gene ID 852004 Accession -
Symbol SXM1 Alias KAP108 Full Name Nuclear transport factor (karyopherin); involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1
Status Confidence Length 2835 bases Strand Plus strand
Position IV : 1263324 - 1266158 RNA binding domain IBN_N
Summary Enables nuclear import signal receptor activity. Involved in mRNA export from nucleus and protein import into nucleus. Located in cytoplasm and nucleus. Orthologous to human IPO7 (importin 7) and IPO8 (importin 8). [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
YDR395W IBN_N PF03810 1.1e-19 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- YDR395W_mRNA 2835 944aa YDR395W

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
YDR395W

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
YDR395W

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0005634located_in nucleus2IDA,IEASaccharomyces_cerevisiae(559292)Component
GO:0005635is_active_in nuclear envelope1IBASaccharomyces_cerevisiae(559292)Component
GO:0005643part_of nuclear pore1IEASaccharomyces_cerevisiae(559292)Component
GO:0005737located_in cytoplasm2IDA,IEASaccharomyces_cerevisiae(559292)Component
GO:0005829is_active_in cytosol1IBASaccharomyces_cerevisiae(559292)Component
GO:0006406involved_in mRNA export from nucleus1IGISaccharomyces_cerevisiae(559292)Process
GO:0006606involved_in protein import into nucleus2IBA,IDASaccharomyces_cerevisiae(559292)Process
GO:0006886involved_in intracellular protein transport1IEASaccharomyces_cerevisiae(559292)Process
GO:0015031involved_in protein transport1IEASaccharomyces_cerevisiae(559292)Process
GO:0031267enables small GTPase binding1IEASaccharomyces_cerevisiae(559292)Function
GO:0051028involved_in mRNA transport1IEASaccharomyces_cerevisiae(559292)Process
GO:0051170involved_in import into nucleus1IEASaccharomyces_cerevisiae(559292)Process
GO:0061608enables nuclear import signal receptor activity3IMP,IPI,ISSSaccharomyces_cerevisiae(559292)Function

Expression