RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID YDR395W Gene ID
852004
Accession
-
Symbol
SXM1
Alias
KAP108
Full Name
Nuclear transport factor (karyopherin); involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1
Status
Confidence
Length
2835 bases
Strand
Plus strand
Position
IV : 1263324 - 1266158
RNA binding domain
IBN_N
Summary
Enables nuclear import signal receptor activity. Involved in mRNA export from nucleus and protein import into nucleus. Located in cytoplasm and nucleus. Orthologous to human IPO7 (importin 7) and IPO8 (importin 8). [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
YDR395W
IBN_N
PF03810
1.1e-19
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
-
YDR395W_mRNA
2835
944aa
YDR395W
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
YDR395W
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
YDR395W
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0005634 located_in nucleus 2 IDA,IEA Saccharomyces_cerevisiae(559292) Component GO:0005635 is_active_in nuclear envelope 1 IBA Saccharomyces_cerevisiae(559292) Component GO:0005643 part_of nuclear pore 1 IEA Saccharomyces_cerevisiae(559292) Component GO:0005737 located_in cytoplasm 2 IDA,IEA Saccharomyces_cerevisiae(559292) Component GO:0005829 is_active_in cytosol 1 IBA Saccharomyces_cerevisiae(559292) Component GO:0006406 involved_in mRNA export from nucleus 1 IGI Saccharomyces_cerevisiae(559292) Process GO:0006606 involved_in protein import into nucleus 2 IBA,IDA Saccharomyces_cerevisiae(559292) Process GO:0006886 involved_in intracellular protein transport 1 IEA Saccharomyces_cerevisiae(559292) Process GO:0015031 involved_in protein transport 1 IEA Saccharomyces_cerevisiae(559292) Process GO:0031267 enables small GTPase binding 1 IEA Saccharomyces_cerevisiae(559292) Function GO:0051028 involved_in mRNA transport 1 IEA Saccharomyces_cerevisiae(559292) Process GO:0051170 involved_in import into nucleus 1 IEA Saccharomyces_cerevisiae(559292) Process GO:0061608 enables nuclear import signal receptor activity 3 IMP,IPI,ISS Saccharomyces_cerevisiae(559292) Function
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