RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	WBGene00018932	Gene ID	176903	Accession	-
Symbol	mrpl-2	Alias	NA	Full Name	Ribosomal_L2_C domain-containing protein
Status	Confidence	Length	3419 bases	Strand	Plus strand
Position	IV : 773237 - 776655	RNA binding domain	Ribosomal_L2 , Ribosomal_L2_C
Summary	Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in ribosome. Predicted to be part of mitochondrial large ribosomal subunit. Orthologous to human MRPL2 (mitochondrial ribosomal protein L2). [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

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Protein	Domain	Pfam ID	E-value	Domain number
F56B3	Ribosomal_L2	PF00181	3.9e-17	1
F56B3	Ribosomal_L2_C	PF03947	1.4e-15	2

Showing 1 to 2 of 2 entries

Transcripts

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Name	Transcript ID	bp	Protein	Translation ID
mrpl-2-202	F56B3	213	70aa	F56B3

Showing 1 to 1 of 1 entries

Gene Model

Click here to download WBGene00018932's gene model file

Protein-Protein Interaction (PPI)

Click here to download WBGene00018932's PPI file

Paralogs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
WBGene00018932	caenorhabditis_elegans	B0250.1.1	31.1538	18.0769	caenorhabditis_elegans	F56B3.8a.1	25.2336	14.6417

Showing 1 to 1 of 1 entries

Orthologs

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Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	48.2866	29.2835	latimeria_chalumnae	ENSLACP00000017485	53.8194	32.6389
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	47.6636	30.5296	meleagris_gallopavo	ENSMGAP00000003539	48.265	30.9148
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	52.0249	33.0218	cyclopterus_lumpus	ENSCLMP00005006372	56.0403	35.5705
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	49.8442	33.0218	sphenodon_punctatus	ENSSPUP00000000384	53.8721	35.6902
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	51.0903	31.1526	lepisosteus_oculatus	ENSLOCP00000019548	50.3067	30.6748
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	49.8442	33.0218	petromyzon_marinus	ENSPMAP00000001445	51.1182	33.8658
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	50.1558	33.6449	ornithorhynchus_anatinus	ENSOANP00000013436	54.2088	36.3636
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	50.1558	33.3333	laticauda_laticaudata	ENSLLTP00000000032	54.3919	36.1486
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	25.2336	15.8879	ciona_intestinalis	ENSCINP00000010033	36.9863	23.2877
WBGene00018932	caenorhabditis_elegans	F56B3.8a.1	38.6293	24.6106	anas_platyrhynchos_platyrhynchos	ENSAPLP00000026230	62.9442	40.1015

Showing 1 to 10 of 198 entries

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Gene Ontology

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Go ID	Go term	No. evidence	Entries	Species	Category
GO:0003735	enables structural constituent of ribosome	2	IBA,IEA	Caenorhabditis_elegans(6239)	Function
GO:0003723	enables RNA binding	1	IBA	Caenorhabditis_elegans(6239)	Function
GO:0005762	part_of mitochondrial large ribosomal subunit	1	IBA	Caenorhabditis_elegans(6239)	Component
GO:0005840	located_in ribosome	1	IEA	Caenorhabditis_elegans(6239)	Component
GO:0006412	involved_in translation	1	IEA	Caenorhabditis_elegans(6239)	Process
GO:0032543	involved_in mitochondrial translation	1	IBA	Caenorhabditis_elegans(6239)	Process
GO:1990904	part_of ribonucleoprotein complex	1	IEA	Caenorhabditis_elegans(6239)	Component

Showing 1 to 7 of 7 entries

Contents

Description
RBDs
Transcripts
Gene Model
PPI
Paralogs
Orthologs
Gene Ontology