RBPWorld - a comprehensive database of RNA Binding Proteins

Welcome to

RBP World!

Description

Ensembl ID	WBGene00007717	Gene ID	182884	Accession	-
Symbol	C25D7.5	Alias	NA	Full Name	Lactamase_B domain-containing protein
Status	Confidence	Length	3642 bases	Strand	Plus strand
Position	V : 15052650 - 15056291	RNA binding domain	Lactamase_B
Summary	Involved in innate immune response. Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
C25D7	Lactamase_B	PF00753	3.6e-05	1
C25D7	Lactamase_B	PF00753	3.6e-05	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
C25D7.5-201	C25D7	2321	362aa	C25D7

Gene Model

Click here to download WBGene00007717's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download WBGene00007717's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
WBGene00007717

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
WBGene00007717

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0016020	located_in membrane	1	IEA	Caenorhabditis_elegans(6239)	Component
GO:0045087	involved_in innate immune response	1	HEP	Caenorhabditis_elegans(6239)	Process

Expression