RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	WBGene00007297	Gene ID	172816	Accession	-
Symbol	C04F12.1	Alias	NA	Full Name	Piwi domain-containing protein
Status	Confidence	Length	4894 bases	Strand	Minus strand
Position	I : 9673664 - 9678557	RNA binding domain	Piwi
Summary	Predicted to enable nucleic acid binding activity. Involved in IRE1-mediated unfolded protein response. [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
C04F12	Piwi	PF02171	2.8e-51	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
C04F12.1-201	C04F12	3088	944aa	C04F12

Gene Model

Click here to download WBGene00007297's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download WBGene00007297's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
WBGene00007297

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
WBGene00007297

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category
GO:0003676	enables nucleic acid binding	1	IEA	Caenorhabditis_elegans(6239)	Function
GO:0003727	enables single-stranded RNA binding	1	IBA	Caenorhabditis_elegans(6239)	Function
GO:0004521	enables RNA endonuclease activity	1	IBA	Caenorhabditis_elegans(6239)	Function
GO:0035198	enables miRNA binding	1	IBA	Caenorhabditis_elegans(6239)	Function
GO:0036498	involved_in IRE1-mediated unfolded protein response	1	HEP	Caenorhabditis_elegans(6239)	Process

Expression