RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID WBGene00004323 Gene ID
179393
Accession
-
Symbol
rde-1
Alias
NA
Full Name
Piwi domain-containing protein
Status
Confidence
Length
3727 bases
Strand
Minus strand
Position
V : 9987916 - 9991642
RNA binding domain
Piwi
Summary
Enables DEAD/H-box RNA helicase binding activity; endoribonuclease activity, producing 5'-phosphomonoesters; and siRNA binding activity. Involved in conversion of ds siRNA to ss siRNA involved in RNA interference and heterochromatin assembly by small RNA. Part of RISC complex. [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
K08H10
Piwi
PF02171
7.7e-63
1
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
rde-1-201
K08H10
3218
1020aa
K08H10
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
WBGene00004323
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
WBGene00004323
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0003676 enables nucleic acid binding 1 IEA Caenorhabditis_elegans(6239) Function GO:0003727 enables single-stranded RNA binding 1 IBA Caenorhabditis_elegans(6239) Function GO:0004521 enables RNA endonuclease activity 1 IBA Caenorhabditis_elegans(6239) Function GO:0005515 enables protein binding 1 IPI Caenorhabditis_elegans(6239) Function GO:0016442 part_of RISC complex 1 IDA Caenorhabditis_elegans(6239) Component GO:0016891 enables RNA endonuclease activity, producing 5-phosphomonoesters 1 IMP Caenorhabditis_elegans(6239) Function GO:0017151 enables DEAD/H-box RNA helicase binding 1 IPI Caenorhabditis_elegans(6239) Function GO:0031048 involved_in regulatory ncRNA-mediated heterochromatin formation 1 IMP Caenorhabditis_elegans(6239) Process GO:0035194 involved_in regulatory ncRNA-mediated post-transcriptional gene silencing 1 IMP Caenorhabditis_elegans(6239) Process GO:0035197 enables siRNA binding 1 IDA Caenorhabditis_elegans(6239) Function GO:0035198 enables miRNA binding 1 IBA Caenorhabditis_elegans(6239) Function
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