Description

Ensembl ID WBGene00004189 Gene ID 176024 Accession -
Symbol pars-1 Alias NA Full Name Prolyl-tRNA synthetase
Status Confidence Length 2251 bases Strand Plus strand
Position III : 7239027 - 7241277 RNA binding domain ProRS-C_1 , HGTP_anticodon , tRNA-synt_2b
Summary Predicted to enable proline-tRNA ligase activity. Predicted to be involved in prolyl-tRNA aminoacylation. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy. Orthologous to human EPRS1 (glutamyl-prolyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
T20H4 ProRS-C_1 PF09180 7.1e-21 1
T20H4 tRNA-synt_2b PF00587 1.5e-16 2
T20H4 tRNA-synt_2b PF00587 2.4e-16 3
T20H4 HGTP_anticodon PF03129 2.4e-18 4
T20H4 HGTP_anticodon PF03129 1.7e-12 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
pars-1-202 T20H4 1797 454aa T20H4

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
WBGene00004189caenorhabditis_elegansT27F6.5a.124.889911.674caenorhabditis_elegansT20H4.3a.119.44929.1222
WBGene00004189caenorhabditis_elegansC47D12.6a.122.06911.1724caenorhabditis_elegansT20H4.3a.127.538713.9415
WBGene00004189caenorhabditis_elegansY46H3A.7a.112.54244.0678caenorhabditis_elegansT20H4.3a.16.368332.0654

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
WBGene00004189caenorhabditis_elegansT20H4.3a.127.194520.9983lepisosteus_oculatusENSLOCP0000002075773.488456.7442
WBGene00004189caenorhabditis_elegansT20H4.3a.120.481913.5972petromyzon_marinusENSPMAP0000000015556.132137.2642
WBGene00004189caenorhabditis_elegansT20H4.3a.123.063712.3924ornithorhynchus_anatinusENSOANP0000004835116.68748.96638
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.8348ailuropoda_melanoleucaENSAMEP0000000167323.955412.8134
WBGene00004189caenorhabditis_elegansT20H4.3a.125.989713.9415ochotona_princepsENSOPRP0000000932321.030611.2813
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.4905macaca_fascicularisENSMFAP0000001462823.521312.3796
WBGene00004189caenorhabditis_elegansT20H4.3a.125.645413.7694macaca_nemestrinaENSMNEP0000003813422.40612.0301
WBGene00004189caenorhabditis_elegansT20H4.3a.126.678114.1136echinops_telfairiENSETEP0000000696621.64811.4525
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.3184papio_anubisENSPANP0000001189923.816212.3955
WBGene00004189caenorhabditis_elegansT20H4.3a.127.194514.9742dipodomys_ordiiENSDORP0000000709926.245814.4518
WBGene00004189caenorhabditis_elegansT20H4.3a.122.375211.3597vicugna_pacosENSVPAP0000000504218.89539.59302
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.4905mandrillus_leucophaeusENSMLEP0000001207123.955412.5348
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604116.179panthera_leoENSPLOP0000002645724.123413.1837
WBGene00004189caenorhabditis_elegansT20H4.3a.128.915715.6627loxodonta_africanaENSLAFP0000000416423.30112.6214
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604116.179felis_catusENSFCAP0000000157724.123413.1837
WBGene00004189caenorhabditis_elegansT20H4.3a.129.087815.1463cercocebus_atysENSCATP0000002246324.177412.5894
WBGene00004189caenorhabditis_elegansT20H4.3a.129.259916.0069canis_lupus_familiarisENSCAFP0084502434923.676912.9526
WBGene00004189caenorhabditis_elegansT20H4.3a.129.259915.4905sus_scrofaENSSSCP0000002208723.676912.5348
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776215.6627bos_indicus_hybridENSBIXP0000502394321.733711.4322
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.8348equus_asinusENSEASP0000505935523.717112.7601
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43216.179chinchilla_lanigeraENSCLAP0000002515724.324313.3713
WBGene00004189caenorhabditis_elegansT20H4.3a.121.170411.3597procavia_capensisENSPCAP0000001558218.46859.90991
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43216.179vulpes_vulpesENSVVUP0000001564323.717113.0374
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948415.8348mus_spretusMGP_SPRETEiJ_P006159024.066412.7248
WBGene00004189caenorhabditis_elegansT20H4.3a.129.259916.0069octodon_degusENSODEP0000001613723.448312.8276
WBGene00004189caenorhabditis_elegansT20H4.3a.128.571414.8021sarcophilus_harrisiiENSSHAP0000002435023.281912.0617
WBGene00004189caenorhabditis_elegansT20H4.3a.128.915715.6627heterocephalus_glaber_femaleENSHGLP0000001289523.496512.7273
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.8348equus_caballusENSECAP0000001204323.717112.7601
WBGene00004189caenorhabditis_elegansT20H4.3a.130.120516.3511cricetulus_griseus_chok1gshdENSCGRP0000102611724.204713.1397
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43214.9742pan_paniscusENSPPAP0000003865623.816212.117
WBGene00004189caenorhabditis_elegansT20H4.3a.110.67135.50775cavia_porcellusENSCPOP0000000950621.379311.0345
WBGene00004189caenorhabditis_elegansT20H4.3a.124.268511.8761erinaceus_europaeusENSEEUP0000000016019.61069.59666
WBGene00004189caenorhabditis_elegansT20H4.3a.18.433735.16351erinaceus_europaeusENSEEUP0000001153313.35158.17439
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948416.3511camelus_dromedariusENSCDRP0000502475524.23413.2312
WBGene00004189caenorhabditis_elegansT20H4.3a.129.087815.1463sorex_araneusENSSARP0000001187424.005712.5
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.8348physeter_catodonENSPCTP0000502856524.56913.2184
WBGene00004189caenorhabditis_elegansT20H4.3a.125.989713.7694gorilla_gorillaENSGGOP0000000617724.552813.0081
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776215.4905rhinopithecus_roxellanaENSRROP0000001342924.094712.5348
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776216.179balaenoptera_musculusENSBMSP0001002029424.094713.0919
WBGene00004189caenorhabditis_elegansT20H4.3a.162.994850.7745eptatretus_burgeriENSEBUP0000002611169.581756.0836
WBGene00004189caenorhabditis_elegansT20H4.3a.129.259915.1463urocitellus_parryiiENSUPAP0001000267223.676912.2563
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776215.8348mus_pahariMGP_PahariEiJ_P007018223.928112.7248
WBGene00004189caenorhabditis_elegansT20H4.3a.130.120516.0069bos_grunniensENSBGRP0000000118824.038512.7747
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948415.6627mus_spicilegusENSMSIP0000000800324.066412.5864
WBGene00004189caenorhabditis_elegansT20H4.3a.130.292616.6954delphinapterus_leucasENSDLEP0000001316714.80248.15812
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.6627ursus_maritimusENSUMAP0000000459523.955412.6741
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.6627dasypus_novemcinctusENSDNOP0000000460324.055912.7273
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.8348ovis_aries_rambouilletENSOARP0002001061523.955412.8134
WBGene00004189caenorhabditis_elegansT20H4.3a.118.93299.63855tupaia_belangeriENSTBEP0000000345815.40627.84314
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604116.179panthera_pardusENSPPRP0000002785524.123413.1837
WBGene00004189caenorhabditis_elegansT20H4.3a.112.90886.0241choloepus_hoffmanniENSCHOP0000000070716.37557.64192
WBGene00004189caenorhabditis_elegansT20H4.3a.123.752213.0809tursiops_truncatusENSTTRP0000001007423.429512.9032
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.8348myotis_lucifugusENSMLUP0000001194123.855812.7601
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.8348phocoena_sinusENSPSNP0000000259023.816212.8134
WBGene00004189caenorhabditis_elegansT20H4.3a.128.743515.1463aotus_nancymaaeENSANAP0000000356723.259112.2563
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776216.0069bison_bison_bisonENSBBBP0000001586024.094712.9526
WBGene00004189caenorhabditis_elegansT20H4.3a.130.120516.179mesocricetus_auratusENSMAUP0000000618824.204713.0014
WBGene00004189caenorhabditis_elegansT20H4.3a.128.399314.6299rhinopithecus_bietiENSRBIP0000004251323.63912.1777
WBGene00004189caenorhabditis_elegansT20H4.3a.128.915714.9742callithrix_jacchusENSCJAP0000001196023.398312.117
WBGene00004189caenorhabditis_elegansT20H4.3a.128.227215.3184rhinolophus_ferrumequinumENSRFEP0001003113822.312912.1088
WBGene00004189caenorhabditis_elegansT20H4.3a.123.407916.179tetraodon_nigroviridisENSTNIP0000000441059.649141.2281
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.8348capra_hircusENSCHIP0000001963523.955412.8134
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776216.0069bos_mutusENSBMUP0000003161823.994512.8988
WBGene00004189caenorhabditis_elegansT20H4.3a.129.087816.0069panthera_tigris_altaicaENSPTIP0000000618123.702713.0435
WBGene00004189caenorhabditis_elegansT20H4.3a.127.88315.3184saimiri_boliviensis_boliviensisENSSBOP0000000034624.770613.6086
WBGene00004189caenorhabditis_elegansT20H4.3a.129.087815.6627catagonus_wagneriENSCWAP0000001125123.537612.6741
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604116.0069cervus_hanglu_yarkandensisENSCHYP0000001799123.955412.9526
WBGene00004189caenorhabditis_elegansT20H4.3a.128.227215.1463phascolarctos_cinereusENSPCIP0000001098622.873112.2734
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.3184macaca_mulattaENSMMUP0000000823023.816212.3955
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.6627propithecus_coquereliENSPCOP0000001147123.816212.6741
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776215.8348mustela_putorius_furoENSMPUP0000000475623.994512.7601
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948416.0069bos_taurusENSBTAP0000000494824.23412.9526
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604116.179moschus_moschiferusENSMMSP0000002666123.955413.0919
WBGene00004189caenorhabditis_elegansT20H4.3a.127.710814.8021vombatus_ursinusENSVURP0001000061022.454711.9944
WBGene00004189caenorhabditis_elegansT20H4.3a.127.710814.8021vombatus_ursinusENSVURP0001001992422.392211.9611
WBGene00004189caenorhabditis_elegansT20H4.3a.14.475042.92599nannospalax_galiliENSNGAP0000002671318.309911.9718
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43216.0069jaculus_jaculusENSJJAP0000002160023.78312.9346
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948415.6627oryctolagus_cuniculusENSOCUP0000004628424.23412.6741
WBGene00004189caenorhabditis_elegansT20H4.3a.128.571415.1463monodelphis_domesticaENSMODP0000002343723.15212.2734
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776215.6627mus_caroliMGP_CAROLIEiJ_P005921423.928112.5864
WBGene00004189caenorhabditis_elegansT20H4.3a.128.743515.1463ictidomys_tridecemlineatusENSSTOP0000000745923.554312.4118
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.3184pongo_abeliiENSPPYP0000004160223.955412.3955
WBGene00004189caenorhabditis_elegansT20H4.3a.173.838256.2823poecilia_latipinnaENSPLAP0000001844766.511650.6977
WBGene00004189caenorhabditis_elegansT20H4.3a.129.259915.4905rattus_norvegicusENSRNOP0000007288623.513112.4481
WBGene00004189caenorhabditis_elegansT20H4.3a.130.292616.0069peromyscus_maniculatus_bairdiiENSPEMP0000001438424.309412.8453
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.1463marmota_marmota_marmotaENSMMMP0000002211323.816212.2563
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.3184nomascus_leucogenysENSNLEP0000001202923.955412.3955
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776216.0069neovison_visonENSNVIP0000002145324.094712.9526
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604116.179monodon_monocerosENSMMNP0001500619323.955413.0919
WBGene00004189caenorhabditis_elegansT20H4.3a.165.576649.0534saccharomyces_cerevisiaeYHR020W55.377941.4244
WBGene00004189caenorhabditis_elegansT20H4.3a.127.538714.6299microcebus_murinusENSMICP0000000731222.56711.9887
WBGene00004189caenorhabditis_elegansT20H4.3a.124.95712.7367ursus_americanusENSUAMP0000003126923.654212.0718
WBGene00004189caenorhabditis_elegansT20H4.3a.129.43215.3184chlorocebus_sabaeusENSCSAP0000001409423.816212.3955
WBGene00004189caenorhabditis_elegansT20H4.3a.129.259916.0069canis_lupus_dingoENSCAFP0002002497823.676912.9526
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948416.0069microtus_ochrogasterENSMOCP0000002089924.066412.8631
WBGene00004189caenorhabditis_elegansT20H4.3a.128.915714.9742cebus_imitatorENSCCAP0000003259723.398312.117
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.1463homo_sapiensENSP0000035806023.955412.2563
WBGene00004189caenorhabditis_elegansT20H4.3a.127.194514.8021notamacropus_eugeniiENSMEUP0000001299121.97511.9611
WBGene00004189caenorhabditis_elegansT20H4.3a.129.776215.6627sciurus_vulgarisENSSVLP0000500132824.094712.6741
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948416.0069carlito_syrichtaENSTSYP0000002353124.23412.9526
WBGene00004189caenorhabditis_elegansT20H4.3a.129.604115.1463pan_troglodytesENSPTRP0000000212923.955412.2563
WBGene00004189caenorhabditis_elegansT20H4.3a.127.022414.1136pteropus_vampyrusENSPVAP0000000410821.866311.4206
WBGene00004189caenorhabditis_elegansT20H4.3a.129.087815.4905prolemur_simusENSPSMP0000003063023.537612.5348
WBGene00004189caenorhabditis_elegansT20H4.3a.129.948415.8348mus_musculusENSMUSP0000002975224.066412.7248
WBGene00004189caenorhabditis_elegansT20H4.3a.125.473312.2203otolemur_garnettiiENSOGAP0000000479621.511610.3198

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0000166enables nucleotide binding1IEACaenorhabditis_elegans(6239)Function
GO:0004812enables aminoacyl-tRNA ligase activity1IEACaenorhabditis_elegans(6239)Function
GO:0004827enables proline-tRNA ligase activity2IBA,IEACaenorhabditis_elegans(6239)Function
GO:0005524enables ATP binding1IEACaenorhabditis_elegans(6239)Function
GO:0005737is_active_in cytoplasm2IBA,IEACaenorhabditis_elegans(6239)Component
GO:0006412involved_in translation1IEACaenorhabditis_elegans(6239)Process
GO:0006418involved_in tRNA aminoacylation for protein translation1IEACaenorhabditis_elegans(6239)Process
GO:0006433involved_in prolyl-tRNA aminoacylation2IBA,IEACaenorhabditis_elegans(6239)Process
GO:0016874enables ligase activity1IEACaenorhabditis_elegans(6239)Function
GO:0017101part_of aminoacyl-tRNA synthetase multienzyme complex1IBACaenorhabditis_elegans(6239)Component

Expression