RBP Type
N.A.
Diseases
Drug
Main interacting RNAs
Moonlighting functions
Localizations
BulkPerturb-seq
Ensembl ID WBGene00004189 Gene ID
176024
Accession
-
Symbol
pars-1
Alias
NA
Full Name
Prolyl-tRNA synthetase
Status
Confidence
Length
2251 bases
Strand
Plus strand
Position
III : 7239027 - 7241277
RNA binding domain
ProRS-C_1 , HGTP_anticodon , tRNA-synt_2b
Summary
Predicted to enable proline-tRNA ligase activity. Predicted to be involved in prolyl-tRNA aminoacylation. Predicted to be part of aminoacyl-tRNA synthetase multienzyme complex. Predicted to be active in cytoplasm. Human ortholog(s) of this gene implicated in hypomyelinating leukodystrophy. Orthologous to human EPRS1 (glutamyl-prolyl-tRNA synthetase 1). [provided by Alliance of Genome Resources, Apr 2022]
RNA binding domains (RBDs)
Protein
Domain
Pfam ID
E-value
Domain number
T20H4
ProRS-C_1
PF09180
7.1e-21
1
T20H4
tRNA-synt_2b
PF00587
1.5e-16
2
T20H4
tRNA-synt_2b
PF00587
2.4e-16
3
T20H4
HGTP_anticodon
PF03129
2.4e-18
4
T20H4
HGTP_anticodon
PF03129
1.7e-12
5
RNA binding proteomes (RBPomes)
Pubmed ID
Full Name
Cell
Author
Time
Doi
Literatures on RNA binding capacity
Pubmed ID
Title
Author
Time
Journal
Name
Transcript ID
bp
Protein
Translation ID
pars-1-202
T20H4
1797
454aa
T20H4
Pathway ID
Pathway Name
Source
ensgID
Trait
pValue
Pubmed ID
ensgID SNP Chromosome Position
Trait PubmedID Or or BEAT
EFO ID
Protein-Protein Interaction (PPI)
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
WBGene00004189 caenorhabditis_elegans T27F6.5a.1 24.8899 11.674 caenorhabditis_elegans T20H4.3a.1 19.4492 9.1222 WBGene00004189 caenorhabditis_elegans C47D12.6a.1 22.069 11.1724 caenorhabditis_elegans T20H4.3a.1 27.5387 13.9415 WBGene00004189 caenorhabditis_elegans Y46H3A.7a.1 12.5424 4.0678 caenorhabditis_elegans T20H4.3a.1 6.36833 2.0654
Ensembl ID
Source
Target
Species
Protein ID
Perc_pos
Perc_id
Species
Protein ID
Perc_pos
Perc_id
WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.1945 20.9983 lepisosteus_oculatus ENSLOCP00000020757 73.4884 56.7442 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 20.4819 13.5972 petromyzon_marinus ENSPMAP00000000155 56.1321 37.2642 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 23.0637 12.3924 ornithorhynchus_anatinus ENSOANP00000048351 16.6874 8.96638 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.8348 ailuropoda_melanoleuca ENSAMEP00000001673 23.9554 12.8134 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 25.9897 13.9415 ochotona_princeps ENSOPRP00000009323 21.0306 11.2813 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.4905 macaca_fascicularis ENSMFAP00000014628 23.5213 12.3796 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 25.6454 13.7694 macaca_nemestrina ENSMNEP00000038134 22.406 12.0301 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 26.6781 14.1136 echinops_telfairi ENSETEP00000006966 21.648 11.4525 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.3184 papio_anubis ENSPANP00000011899 23.8162 12.3955 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.1945 14.9742 dipodomys_ordii ENSDORP00000007099 26.2458 14.4518 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 22.3752 11.3597 vicugna_pacos ENSVPAP00000005042 18.8953 9.59302 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.4905 mandrillus_leucophaeus ENSMLEP00000012071 23.9554 12.5348 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 16.179 panthera_leo ENSPLOP00000026457 24.1234 13.1837 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.9157 15.6627 loxodonta_africana ENSLAFP00000004164 23.301 12.6214 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 16.179 felis_catus ENSFCAP00000001577 24.1234 13.1837 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.0878 15.1463 cercocebus_atys ENSCATP00000022463 24.1774 12.5894 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.2599 16.0069 canis_lupus_familiaris ENSCAFP00845024349 23.6769 12.9526 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.2599 15.4905 sus_scrofa ENSSSCP00000022087 23.6769 12.5348 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 15.6627 bos_indicus_hybrid ENSBIXP00005023943 21.7337 11.4322 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.8348 equus_asinus ENSEASP00005059355 23.7171 12.7601 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 16.179 chinchilla_lanigera ENSCLAP00000025157 24.3243 13.3713 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 21.1704 11.3597 procavia_capensis ENSPCAP00000015582 18.4685 9.90991 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 16.179 vulpes_vulpes ENSVVUP00000015643 23.7171 13.0374 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 15.8348 mus_spretus MGP_SPRETEiJ_P0061590 24.0664 12.7248 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.2599 16.0069 octodon_degus ENSODEP00000016137 23.4483 12.8276 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.5714 14.8021 sarcophilus_harrisii ENSSHAP00000024350 23.2819 12.0617 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.9157 15.6627 heterocephalus_glaber_female ENSHGLP00000012895 23.4965 12.7273 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.8348 equus_caballus ENSECAP00000012043 23.7171 12.7601 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 30.1205 16.3511 cricetulus_griseus_chok1gshd ENSCGRP00001026117 24.2047 13.1397 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 14.9742 pan_paniscus ENSPPAP00000038656 23.8162 12.117 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 10.6713 5.50775 cavia_porcellus ENSCPOP00000009506 21.3793 11.0345 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 24.2685 11.8761 erinaceus_europaeus ENSEEUP00000000160 19.6106 9.59666 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 8.43373 5.16351 erinaceus_europaeus ENSEEUP00000011533 13.3515 8.17439 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 16.3511 camelus_dromedarius ENSCDRP00005024755 24.234 13.2312 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.0878 15.1463 sorex_araneus ENSSARP00000011874 24.0057 12.5 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.8348 physeter_catodon ENSPCTP00005028565 24.569 13.2184 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 25.9897 13.7694 gorilla_gorilla ENSGGOP00000006177 24.5528 13.0081 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 15.4905 rhinopithecus_roxellana ENSRROP00000013429 24.0947 12.5348 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 16.179 balaenoptera_musculus ENSBMSP00010020294 24.0947 13.0919 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 62.9948 50.7745 eptatretus_burgeri ENSEBUP00000026111 69.5817 56.0836 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.2599 15.1463 urocitellus_parryii ENSUPAP00010002672 23.6769 12.2563 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 15.8348 mus_pahari MGP_PahariEiJ_P0070182 23.9281 12.7248 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 30.1205 16.0069 bos_grunniens ENSBGRP00000001188 24.0385 12.7747 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 15.6627 mus_spicilegus ENSMSIP00000008003 24.0664 12.5864 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 30.2926 16.6954 delphinapterus_leucas ENSDLEP00000013167 14.8024 8.15812 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.6627 ursus_maritimus ENSUMAP00000004595 23.9554 12.6741 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.6627 dasypus_novemcinctus ENSDNOP00000004603 24.0559 12.7273 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.8348 ovis_aries_rambouillet ENSOARP00020010615 23.9554 12.8134 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 18.9329 9.63855 tupaia_belangeri ENSTBEP00000003458 15.4062 7.84314 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 16.179 panthera_pardus ENSPPRP00000027855 24.1234 13.1837 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 12.9088 6.0241 choloepus_hoffmanni ENSCHOP00000000707 16.3755 7.64192 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 23.7522 13.0809 tursiops_truncatus ENSTTRP00000010074 23.4295 12.9032 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.8348 myotis_lucifugus ENSMLUP00000011941 23.8558 12.7601 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.8348 phocoena_sinus ENSPSNP00000002590 23.8162 12.8134 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.7435 15.1463 aotus_nancymaae ENSANAP00000003567 23.2591 12.2563 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 16.0069 bison_bison_bison ENSBBBP00000015860 24.0947 12.9526 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 30.1205 16.179 mesocricetus_auratus ENSMAUP00000006188 24.2047 13.0014 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.3993 14.6299 rhinopithecus_bieti ENSRBIP00000042513 23.639 12.1777 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.9157 14.9742 callithrix_jacchus ENSCJAP00000011960 23.3983 12.117 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.2272 15.3184 rhinolophus_ferrumequinum ENSRFEP00010031138 22.3129 12.1088 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 23.4079 16.179 tetraodon_nigroviridis ENSTNIP00000004410 59.6491 41.2281 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.8348 capra_hircus ENSCHIP00000019635 23.9554 12.8134 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 16.0069 bos_mutus ENSBMUP00000031618 23.9945 12.8988 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.0878 16.0069 panthera_tigris_altaica ENSPTIP00000006181 23.7027 13.0435 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.883 15.3184 saimiri_boliviensis_boliviensis ENSSBOP00000000346 24.7706 13.6086 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.0878 15.6627 catagonus_wagneri ENSCWAP00000011251 23.5376 12.6741 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 16.0069 cervus_hanglu_yarkandensis ENSCHYP00000017991 23.9554 12.9526 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.2272 15.1463 phascolarctos_cinereus ENSPCIP00000010986 22.8731 12.2734 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.3184 macaca_mulatta ENSMMUP00000008230 23.8162 12.3955 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.6627 propithecus_coquereli ENSPCOP00000011471 23.8162 12.6741 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 15.8348 mustela_putorius_furo ENSMPUP00000004756 23.9945 12.7601 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 16.0069 bos_taurus ENSBTAP00000004948 24.234 12.9526 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 16.179 moschus_moschiferus ENSMMSP00000026661 23.9554 13.0919 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.7108 14.8021 vombatus_ursinus ENSVURP00010000610 22.4547 11.9944 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.7108 14.8021 vombatus_ursinus ENSVURP00010019924 22.3922 11.9611 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 4.47504 2.92599 nannospalax_galili ENSNGAP00000026713 18.3099 11.9718 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 16.0069 jaculus_jaculus ENSJJAP00000021600 23.783 12.9346 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 15.6627 oryctolagus_cuniculus ENSOCUP00000046284 24.234 12.6741 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.5714 15.1463 monodelphis_domestica ENSMODP00000023437 23.152 12.2734 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 15.6627 mus_caroli MGP_CAROLIEiJ_P0059214 23.9281 12.5864 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.7435 15.1463 ictidomys_tridecemlineatus ENSSTOP00000007459 23.5543 12.4118 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.3184 pongo_abelii ENSPPYP00000041602 23.9554 12.3955 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 73.8382 56.2823 poecilia_latipinna ENSPLAP00000018447 66.5116 50.6977 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.2599 15.4905 rattus_norvegicus ENSRNOP00000072886 23.5131 12.4481 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 30.2926 16.0069 peromyscus_maniculatus_bairdii ENSPEMP00000014384 24.3094 12.8453 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.1463 marmota_marmota_marmota ENSMMMP00000022113 23.8162 12.2563 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.3184 nomascus_leucogenys ENSNLEP00000012029 23.9554 12.3955 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 16.0069 neovison_vison ENSNVIP00000021453 24.0947 12.9526 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 16.179 monodon_monoceros ENSMMNP00015006193 23.9554 13.0919 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 65.5766 49.0534 saccharomyces_cerevisiae YHR020W 55.3779 41.4244 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.5387 14.6299 microcebus_murinus ENSMICP00000007312 22.567 11.9887 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 24.957 12.7367 ursus_americanus ENSUAMP00000031269 23.6542 12.0718 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.432 15.3184 chlorocebus_sabaeus ENSCSAP00000014094 23.8162 12.3955 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.2599 16.0069 canis_lupus_dingo ENSCAFP00020024978 23.6769 12.9526 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 16.0069 microtus_ochrogaster ENSMOCP00000020899 24.0664 12.8631 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 28.9157 14.9742 cebus_imitator ENSCCAP00000032597 23.3983 12.117 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.1463 homo_sapiens ENSP00000358060 23.9554 12.2563 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.1945 14.8021 notamacropus_eugenii ENSMEUP00000012991 21.975 11.9611 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.7762 15.6627 sciurus_vulgaris ENSSVLP00005001328 24.0947 12.6741 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 16.0069 carlito_syrichta ENSTSYP00000023531 24.234 12.9526 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.6041 15.1463 pan_troglodytes ENSPTRP00000002129 23.9554 12.2563 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 27.0224 14.1136 pteropus_vampyrus ENSPVAP00000004108 21.8663 11.4206 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.0878 15.4905 prolemur_simus ENSPSMP00000030630 23.5376 12.5348 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 29.9484 15.8348 mus_musculus ENSMUSP00000029752 24.0664 12.7248 WBGene00004189 caenorhabditis_elegans T20H4.3a.1 25.4733 12.2203 otolemur_garnettii ENSOGAP00000004796 21.5116 10.3198
Go ID
Go term
No. evidence
Entries
Species
Category
GO:0000166 enables nucleotide binding 1 IEA Caenorhabditis_elegans(6239) Function GO:0004812 enables aminoacyl-tRNA ligase activity 1 IEA Caenorhabditis_elegans(6239) Function GO:0004827 enables proline-tRNA ligase activity 2 IBA,IEA Caenorhabditis_elegans(6239) Function GO:0005524 enables ATP binding 1 IEA Caenorhabditis_elegans(6239) Function GO:0005737 is_active_in cytoplasm 2 IBA,IEA Caenorhabditis_elegans(6239) Component GO:0006412 involved_in translation 1 IEA Caenorhabditis_elegans(6239) Process GO:0006418 involved_in tRNA aminoacylation for protein translation 1 IEA Caenorhabditis_elegans(6239) Process GO:0006433 involved_in prolyl-tRNA aminoacylation 2 IBA,IEA Caenorhabditis_elegans(6239) Process GO:0016874 enables ligase activity 1 IEA Caenorhabditis_elegans(6239) Function GO:0017101 part_of aminoacyl-tRNA synthetase multienzyme complex 1 IBA Caenorhabditis_elegans(6239) Component
Copyright © 2023, Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.