Description

Ensembl ID WBGene00000472 Gene ID 174690 Accession -
Symbol cey-1 Alias NA Full Name CSD domain-containing protein
Status Confidence Length 1859 bases Strand Minus strand
Position II : 11039348 - 11041206 RNA binding domain CSD
Summary Predicted to enable nucleic acid binding activity. Predicted to be involved in regulation of gene expression. Located in endoplasmic reticulum. Is expressed in germ cell; germ line; muscle cell; pharynx; and somatic cell. Orthologous to several human genes including YBX3 (Y-box binding protein 3). [provided by Alliance of Genome Resources, Apr 2022]

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
F33A8 CSD PF00313 7.1e-26 1

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
cey-1-201 F33A8 1381 208aa F33A8

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
WBGene00000472caenorhabditis_elegansY39A1C.3.125.850320.7483caenorhabditis_elegansF33A8.3.136.538529.3269
WBGene00000472caenorhabditis_elegansF46F11.2.126.966319.4757caenorhabditis_elegansF33A8.3.134.615425
WBGene00000472caenorhabditis_elegansM01E11.5.126.792520caenorhabditis_elegansF33A8.3.134.134625.4808

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
WBGene00000472caenorhabditis_elegansF33A8.3.142.307735.0962meleagris_gallopavoENSMGAP0000001504434.108528.2946
WBGene00000472caenorhabditis_elegansF33A8.3.138.461534.6154sphenodon_punctatusENSSPUP0000001285237.735833.9623
WBGene00000472caenorhabditis_elegansF33A8.3.137.528.3654ornithorhynchus_anatinusENSOANP0000003788736.792527.8302
WBGene00000472caenorhabditis_elegansF33A8.3.148.076939.4231ciona_intestinalisENSCINP0000002110731.2525.625
WBGene00000472caenorhabditis_elegansF33A8.3.138.942333.6538anas_platyrhynchos_platyrhynchosENSAPLP0000000263625.632922.1519
WBGene00000472caenorhabditis_elegansF33A8.3.147.596237.9808oryzias_latipesENSORLP0000000787924.146319.2683
WBGene00000472caenorhabditis_elegansF33A8.3.146.153837.0192ailuropoda_melanoleucaENSAMEP0000000990732.10725.7525
WBGene00000472caenorhabditis_elegansF33A8.3.144.711537.5gallus_gallusENSGALP0001003545231.958826.8041
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231macaca_fascicularisENSMFAP0000004408726.612922.043
WBGene00000472caenorhabditis_elegansF33A8.3.148.076939.9038macaca_nemestrinaENSMNEP0000004514526.881722.3118
WBGene00000472caenorhabditis_elegansF33A8.3.143.7536.0577serinus_canariaENSSCAP0000001161734.210528.1955
WBGene00000472caenorhabditis_elegansF33A8.3.141.346235.5769echinops_telfairiENSETEP0000000208930.175425.9649
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231papio_anubisENSPANP0000005122726.612922.043
WBGene00000472caenorhabditis_elegansF33A8.3.144.230837.9808dipodomys_ordiiENSDORP0000000854925.915522.2535
WBGene00000472caenorhabditis_elegansF33A8.3.144.230837.9808parus_majorENSPMJP0000001250530.769226.4214
WBGene00000472caenorhabditis_elegansF33A8.3.130.288525.4808vicugna_pacosENSVPAP0000000081322.419918.8612
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846mandrillus_leucophaeusENSMLEP0000001902827.747323.0769
WBGene00000472caenorhabditis_elegansF33A8.3.141.346232.6923panthera_leoENSPLOP0000000154823.822718.8366
WBGene00000472caenorhabditis_elegansF33A8.3.138.461529.3269loxodonta_africanaENSLAFP0000001446421.739116.5761
WBGene00000472caenorhabditis_elegansF33A8.3.141.346232.6923felis_catusENSFCAP0000001643423.822718.8366
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231cercocebus_atysENSCATP0000002139526.541621.9839
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846canis_lupus_familiarisENSCAFP0084503503927.150522.5806
WBGene00000472caenorhabditis_elegansF33A8.3.149.038540.8654sus_scrofaENSSSCP0000002633826.842122.3684
WBGene00000472caenorhabditis_elegansF33A8.3.148.076938.4615bos_indicus_hybridENSBIXP0000500548528.409122.7273
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846equus_asinusENSEASP0000502150927.445722.8261
WBGene00000472caenorhabditis_elegansF33A8.3.145.192338.9423chrysemys_picta_belliiENSCPBP0000001960726.553722.8814
WBGene00000472caenorhabditis_elegansF33A8.3.145.673138.9423chinchilla_lanigeraENSCLAP0000002336931.147526.5574
WBGene00000472caenorhabditis_elegansF33A8.3.139.423134.6154procavia_capensisENSPCAP0000000128628.571425.0871
WBGene00000472caenorhabditis_elegansF33A8.3.139.903833.1731vulpes_vulpesENSVVUP0000000647130.970125.7463
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.8654mus_spretusMGP_SPRETEiJ_P007963327.977823.5457
WBGene00000472caenorhabditis_elegansF33A8.3.141.826935.0962octodon_degusENSODEP0000002453025.970121.791
WBGene00000472caenorhabditis_elegansF33A8.3.147.596240.3846sarcophilus_harrisiiENSSHAP0000000370928.12523.8636
WBGene00000472caenorhabditis_elegansF33A8.3.139.423135.0962heterocephalus_glaber_femaleENSHGLP0000002069228.771925.614
WBGene00000472caenorhabditis_elegansF33A8.3.146.634640.3846heterocephalus_glaber_femaleENSHGLP0000002167927.09523.4637
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846equus_caballusENSECAP0000003102027.445722.8261
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.8654cricetulus_griseus_chok1gshdENSCGRP0000101558427.977823.5457
WBGene00000472caenorhabditis_elegansF33A8.3.147.115438.9423pan_paniscusENSPPAP0000003238027.29822.5627
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846cavia_porcellusENSCPOP0000001018529.793524.7788
WBGene00000472caenorhabditis_elegansF33A8.3.143.7537.5erinaceus_europaeusENSEEUP0000000949432.042327.4648
WBGene00000472caenorhabditis_elegansF33A8.3.144.711538.4615camelus_dromedariusENSCDRP0000501295630.693126.4026
WBGene00000472caenorhabditis_elegansF33A8.3.140.865433.6538crocodylus_porosusENSCPRP0000500143030.46625.0896
WBGene00000472caenorhabditis_elegansF33A8.3.134.134627.4038physeter_catodonENSPCTP0000503052625.818220.7273
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231gorilla_gorillaENSGGOP0000002538326.541621.9839
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231rhinopithecus_roxellanaENSRROP0000001046726.684622.1024
WBGene00000472caenorhabditis_elegansF33A8.3.134.134626.4423balaenoptera_musculusENSBMSP0001000892824.398618.9003
WBGene00000472caenorhabditis_elegansF33A8.3.143.7536.5385urocitellus_parryiiENSUPAP0001000467921.56418.0095
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.8654mus_pahariMGP_PahariEiJ_P005275227.977823.5457
WBGene00000472caenorhabditis_elegansF33A8.3.148.076938.4615bos_grunniensENSBGRP0000003519228.409122.7273
WBGene00000472caenorhabditis_elegansF33A8.3.145.192338.4615mus_spicilegusENSMSIP0000000993027.011522.9885
WBGene00000472caenorhabditis_elegansF33A8.3.130.769224.0385delphinapterus_leucasENSDLEP0000000078325.196819.685
WBGene00000472caenorhabditis_elegansF33A8.3.145.673138.4615ursus_maritimusENSUMAP0000002202731.45726.4901
WBGene00000472caenorhabditis_elegansF33A8.3.124.038518.75dasypus_novemcinctusENSDNOP0000000036822.321417.4107
WBGene00000472caenorhabditis_elegansF33A8.3.143.7535.0962xenopus_tropicalisENSXETP0000010363936.693629.4355
WBGene00000472caenorhabditis_elegansF33A8.3.146.634639.9038tupaia_belangeriENSTBEP0000001091026.721822.865
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846panthera_pardusENSPPRP0000001225727.150522.5806
WBGene00000472caenorhabditis_elegansF33A8.3.149.519240.3846ciona_savignyiENSCSAVP0000000511131.498525.6881
WBGene00000472caenorhabditis_elegansF33A8.3.139.903834.1346choloepus_hoffmanniENSCHOP0000001060122.37219.1375
WBGene00000472caenorhabditis_elegansF33A8.3.143.7536.5385ficedula_albicollisENSFALP0000002280236.693630.6452
WBGene00000472caenorhabditis_elegansF33A8.3.135.096228.8462tursiops_truncatusENSTTRP0000000761627.651522.7273
WBGene00000472caenorhabditis_elegansF33A8.3.135.576929.8077myotis_lucifugusENSMLUP0000000682527.611923.1343
WBGene00000472caenorhabditis_elegansF33A8.3.132.692326.4423phocoena_sinusENSPSNP0000000881726.356621.3178
WBGene00000472caenorhabditis_elegansF33A8.3.127.884622.1154aotus_nancymaaeENSANAP0000003126821.804517.2932
WBGene00000472caenorhabditis_elegansF33A8.3.148.076940.3846aotus_nancymaaeENSANAP0000001316727.02722.7027
WBGene00000472caenorhabditis_elegansF33A8.3.144.711537.5bison_bison_bisonENSBBBP0000002665825.067421.0243
WBGene00000472caenorhabditis_elegansF33A8.3.142.307736.0577pelodiscus_sinensisENSPSIP0000001032641.121535.0467
WBGene00000472caenorhabditis_elegansF33A8.3.147.115439.9038mesocricetus_auratusENSMAUP0000001168128.323723.9884
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231rhinopithecus_bietiENSRBIP0000003073226.684622.1024
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.9038callithrix_jacchusENSCJAP0000008212926.541622.252
WBGene00000472caenorhabditis_elegansF33A8.3.146.153839.4231rhinolophus_ferrumequinumENSRFEP0001000697228.402424.2604
WBGene00000472caenorhabditis_elegansF33A8.3.143.7536.5385rhinolophus_ferrumequinumENSRFEP0001002187719.117615.9664
WBGene00000472caenorhabditis_elegansF33A8.3.149.519240.8654capra_hircusENSCHIP0000000736027.393622.6064
WBGene00000472caenorhabditis_elegansF33A8.3.147.115438.9423bos_mutusENSBMUP0000003620025.454521.039
WBGene00000472caenorhabditis_elegansF33A8.3.148.076939.4231panthera_tigris_altaicaENSPTIP0000000224828.409123.2955
WBGene00000472caenorhabditis_elegansF33A8.3.148.557739.9038saimiri_boliviensis_boliviensisENSSBOP0000002864626.578921.8421
WBGene00000472caenorhabditis_elegansF33A8.3.136.057727.4038catagonus_wagneriENSCWAP0000001464924.038518.2692
WBGene00000472caenorhabditis_elegansF33A8.3.147.115438.4615cervus_hanglu_yarkandensisENSCHYP0000003186926.630421.7391
WBGene00000472caenorhabditis_elegansF33A8.3.134.615428.3654phascolarctos_cinereusENSPCIP0000004093528.12523.0469
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231macaca_mulattaENSMMUP0000002956226.612922.043
WBGene00000472caenorhabditis_elegansF33A8.3.135.576931.25propithecus_coquereliENSPCOP0000000391030.578526.8595
WBGene00000472caenorhabditis_elegansF33A8.3.136.057723.5577mustela_putorius_furoENSMPUP0000001171719.788912.9288
WBGene00000472caenorhabditis_elegansF33A8.3.149.519240.8654bos_taurusENSBTAP0000005887121.7317.9325
WBGene00000472caenorhabditis_elegansF33A8.3.148.557738.9423moschus_moschiferusENSMMSP0000003185428.370822.7528
WBGene00000472caenorhabditis_elegansF33A8.3.128.846224.5192anabas_testudineusENSATEP0000002817541.95835.6643
WBGene00000472caenorhabditis_elegansF33A8.3.148.076940.8654vombatus_ursinusENSVURP0001000960628.571424.2857
WBGene00000472caenorhabditis_elegansF33A8.3.143.7535.0962nannospalax_galiliENSNGAP0000000097220.088316.1148
WBGene00000472caenorhabditis_elegansF33A8.3.134.134626.9231jaculus_jaculusENSJJAP0000001072926.996221.2928
WBGene00000472caenorhabditis_elegansF33A8.3.146.634639.9038oryctolagus_cuniculusENSOCUP0000003418321.412818.3223
WBGene00000472caenorhabditis_elegansF33A8.3.141.826929.8077amphilophus_citrinellusENSACIP0000001912227.531619.6203
WBGene00000472caenorhabditis_elegansF33A8.3.144.711538.4615monodelphis_domesticaENSMODP0000002275830.097125.89
WBGene00000472caenorhabditis_elegansF33A8.3.135.096226.9231gopherus_evgoodeiENSGEVP0000502184023.248417.8344
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.8654mus_caroliMGP_CAROLIEiJ_P007638527.977823.5457
WBGene00000472caenorhabditis_elegansF33A8.3.147.115438.9423ictidomys_tridecemlineatusENSSTOP0000000187631.410325.9615
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231ictidomys_tridecemlineatusENSSTOP0000002583729.117624.1176
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231pongo_abeliiENSPPYP0000000488626.684622.1024
WBGene00000472caenorhabditis_elegansF33A8.3.118.269214.4231denticeps_clupeoidesENSDCDP0000001297141.304332.6087
WBGene00000472caenorhabditis_elegansF33A8.3.143.7537.5aquila_chrysaetos_chrysaetosENSACCP0002001078130.434826.087
WBGene00000472caenorhabditis_elegansF33A8.3.143.7537.5strigops_habroptilaENSSHBP0000501421730.333326
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.8654rattus_norvegicusENSRNOP0000000742722.345118.8053
WBGene00000472caenorhabditis_elegansF33A8.3.145.673138.4615peromyscus_maniculatus_bairdiiENSPEMP0000000892333.216827.972
WBGene00000472caenorhabditis_elegansF33A8.3.145.673138.9423peromyscus_maniculatus_bairdiiENSPEMP0000001151726.912222.9462
WBGene00000472caenorhabditis_elegansF33A8.3.146.153837.9808marmota_marmota_marmotaENSMMMP0000002483226.519321.8232
WBGene00000472caenorhabditis_elegansF33A8.3.143.269236.0577struthio_camelus_australisENSSCUP0000001170235.433129.5276
WBGene00000472caenorhabditis_elegansF33A8.3.144.230835.5769nomascus_leucogenysENSNLEP0000003090526.744221.5116
WBGene00000472caenorhabditis_elegansF33A8.3.145.192337.5neovison_visonENSNVIP0000000124826.111121.6667
WBGene00000472caenorhabditis_elegansF33A8.3.146.153838.4615monodon_monocerosENSMMNP0001502947631.475426.2295
WBGene00000472caenorhabditis_elegansF33A8.3.143.269236.0577microcebus_murinusENSMICP0000003629632.96727.4725
WBGene00000472caenorhabditis_elegansF33A8.3.146.634638.9423microcebus_murinusENSMICP0000003088826.216221.8919
WBGene00000472caenorhabditis_elegansF33A8.3.142.788534.6154geospiza_fortisENSGFOP0000001044635.177928.4585
WBGene00000472caenorhabditis_elegansF33A8.3.140.865433.1731ursus_americanusENSUAMP0000002128331.135525.2747
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231chlorocebus_sabaeusENSCSAP0000000495426.541621.9839
WBGene00000472caenorhabditis_elegansF33A8.3.146.153837.9808canis_lupus_dingoENSCAFP0002000794826.373621.7033
WBGene00000472caenorhabditis_elegansF33A8.3.147.115439.9038microtus_ochrogasterENSMOCP0000001781328.994124.5562
WBGene00000472caenorhabditis_elegansF33A8.3.144.230836.5385leptobrachium_leishanenseENSLLEP0000004860234.456928.4644
WBGene00000472caenorhabditis_elegansF33A8.3.143.7537.5coturnix_japonicaENSCJPP0000502144831.818227.2727
WBGene00000472caenorhabditis_elegansF33A8.3.120.673115.8654labrus_bergyltaENSLBEP0000003522046.739135.8696
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846cebus_imitatorENSCCAP0000000287927.150522.5806
WBGene00000472caenorhabditis_elegansF33A8.3.149.519237.5stegastes_partitusENSSPAP0000002189031.402423.7805
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231homo_sapiensENSP0000022825126.612922.043
WBGene00000472caenorhabditis_elegansF33A8.3.130.769224.5192notamacropus_eugeniiENSMEUP0000000229130.917924.6377
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.3846sciurus_vulgarisENSSVLP0000500436127.297322.7027
WBGene00000472caenorhabditis_elegansF33A8.3.146.153836.5385sciurus_vulgarisENSSVLP0000502690232.10725.4181
WBGene00000472caenorhabditis_elegansF33A8.3.144.230835.5769carlito_syrichtaENSTSYP0000002698132.167825.8741
WBGene00000472caenorhabditis_elegansF33A8.3.145.673137.5carlito_syrichtaENSTSYP0000002571528.023623.0089
WBGene00000472caenorhabditis_elegansF33A8.3.147.596239.4231pan_troglodytesENSPTRP0000000800926.470621.9251
WBGene00000472caenorhabditis_elegansF33A8.3.129.807723.5577taeniopygia_guttataENSTGUP0000001241033.333326.3441
WBGene00000472caenorhabditis_elegansF33A8.3.141.826932.2115chelonoidis_abingdoniiENSCABP0000000841723.138317.8191
WBGene00000472caenorhabditis_elegansF33A8.3.143.7537.9808terrapene_carolina_triunguisENSTMTP0000000846631.597227.4306
WBGene00000472caenorhabditis_elegansF33A8.3.141.826936.0577pteropus_vampyrusENSPVAP0000000636123.324420.1072
WBGene00000472caenorhabditis_elegansF33A8.3.147.115439.4231prolemur_simusENSPSMP0000001394326.273521.9839
WBGene00000472caenorhabditis_elegansF33A8.3.148.557740.8654mus_musculusENSMUSP0000003230927.977823.5457
WBGene00000472caenorhabditis_elegansF33A8.3.136.538528.3654cyprinus_carpio_carpioENSCCRP0000012463227.636421.4545
WBGene00000472caenorhabditis_elegansF33A8.3.143.269237.5anser_brachyrhynchusENSABRP0000001096524.064220.8556
WBGene00000472caenorhabditis_elegansF33A8.3.137.980829.3269otolemur_garnettiiENSOGAP0000001187020.954916.1804

Gene Ontology

Go ID Go term No. evidence Entries Species Category
GO:0003676enables nucleic acid binding2IBA,IEACaenorhabditis_elegans(6239)Function
GO:0005634is_active_in nucleus1IBACaenorhabditis_elegans(6239)Component
GO:0005783located_in endoplasmic reticulum1HDACaenorhabditis_elegans(6239)Component
GO:0010468involved_in regulation of gene expression1IBACaenorhabditis_elegans(6239)Process

Expression