RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Vradi10g10930	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase
Status	Confidence	Length	6282 bases	Strand	Plus strand
Position	10 : 18574446 - 18580727	RNA binding domain	FtsJ
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Vradi10g10930	FtsJ	PF01728	1.6e-64	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Vradi10g10930.1	2242	316aa	Vradi10g10930.1

Gene Model

Click here to download Vradi10g10930's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Vradi10g10930's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vradi10g10930

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vradi10g10930

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression