Description

Ensembl ID Vradi01g11900 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 5986 bases Strand Minus strand
Position 1 : 24269824 - 24275809 RNA binding domain RRM_5 , RRM_8 , RRM_1
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Vradi01g11900 RRM_5 PF13893 3.3e-40 1
Vradi01g11900 RRM_5 PF13893 3.3e-40 2
Vradi01g11900 RRM_5 PF13893 3.3e-40 3
Vradi01g11900 RRM_5 PF13893 1.2e-35 4
Vradi01g11900 RRM_5 PF13893 1.2e-35 5
Vradi01g11900 RRM_5 PF13893 1.2e-35 6
Vradi01g11900 RRM_8 PF11835 1.2e-10 7
Vradi01g11900 RRM_8 PF11835 1.2e-10 8
Vradi01g11900 RRM_1 PF00076 3.2e-26 9
Vradi01g11900 RRM_1 PF00076 3.2e-26 10
Vradi01g11900 RRM_1 PF00076 1.2e-24 11
Vradi01g11900 RRM_1 PF00076 1.2e-24 12

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Vradi01g11900.2 1779 359aa Vradi01g11900.2
- Vradi01g11900.1 1794 364aa Vradi01g11900.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Vradi01g11900

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Vradi01g11900

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression