RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Vitvi19g02013	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Vitvi19g02013
Status	Confidence	Length	3260 bases	Strand	Minus strand
Position	19 : 6772067 - 6775326	RNA binding domain	Ribonuc_L-PSP
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Vitvi19g02013_P001	Ribonuc_L-PSP	PF01042	1e-40	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Vitvi19g02013_t001	911	191aa	Vitvi19g02013_P001

Gene Model

Click here to download Vitvi19g02013's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Vitvi19g02013's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi19g02013

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi19g02013

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression