Description

Ensembl ID Vitvi12g01954 Gene ID Accession -
Symbol Alias - Full Name Vitvi12g01954
Status Confidence Length 5571 bases Strand Minus strand
Position 12 : 20157070 - 20162640 RNA binding domain Lactamase_B , Beta-Casp , CPSF73-100_C , RMMBL
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
Vitvi12g01954_P001 Lactamase_B PF00753 1.4e-21 1
Vitvi12g01954_P001 Beta-Casp PF10996 6.5e-27 2
Vitvi12g01954_P001 CPSF73-100_C PF11718 3.5e-47 3
Vitvi12g01954_P001 RMMBL PF07521 2.2e-14 4

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- Vitvi12g01954_t001 2085 694aa Vitvi12g01954_P001

Gene Model

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Vitvi12g01954

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
Vitvi12g01954

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression