RBPWorld - a comprehensive database of RNA Binding Proteins

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Description

Ensembl ID	Vitvi08g01709	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Vitvi08g01709
Status	Confidence	Length	4294 bases	Strand	Minus strand
Position	8 : 19953909 - 19958202	RNA binding domain	Ribosomal_L6e , Ribosomal_L6e_N
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Vitvi08g01709_P001	Ribosomal_L6e	PF01159	8.5e-40	1
Vitvi08g01709_P001	Ribosomal_L6e_N	PF03868	3.7e-14	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Vitvi08g01709_t001	1664	231aa	Vitvi08g01709_P001

Gene Model

Click here to download Vitvi08g01709's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Vitvi08g01709's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi08g01709

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi08g01709

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression