RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Vitvi05g04084	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Vitvi05g04084
Status	Confidence	Length	8298 bases	Strand	Minus strand
Position	5 : 3174179 - 3182476	RNA binding domain	Ribosomal_S21e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Vitvi05g04084_P001	Ribosomal_S21e	PF01249	3.8e-14	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Vitvi05g04084_t001	273	90aa	Vitvi05g04084_P001

Gene Model

Click here to download Vitvi05g04084's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Vitvi05g04084's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi05g04084

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi05g04084

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression