RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Vitvi04g04235	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Vitvi04g04235
Status	Confidence	Length	11808 bases	Strand	Minus strand
Position	4 : 10740831 - 10752638	RNA binding domain	DNA_RNApol_7kD
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Vitvi04g04235_P001	DNA_RNApol_7kD	PF03604	1.4e-13	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Vitvi04g04235_t001	573	190aa	Vitvi04g04235_P001

Gene Model

Click here to download Vitvi04g04235's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Vitvi04g04235's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi04g04235

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi04g04235

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression