RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	Vitvi03g01190	Gene ID		Accession	-
Symbol		Alias	-	Full Name	Vitvi03g01190
Status	Confidence	Length	5613 bases	Strand	Minus strand
Position	3 : 18750761 - 18756373	RNA binding domain	Ribosomal_S6e
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
Vitvi03g01190_P001	Ribosomal_S6e	PF01092	9.4e-53	1

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	Vitvi03g01190_t001	1149	249aa	Vitvi03g01190_P001

Gene Model

Click here to download Vitvi03g01190's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download Vitvi03g01190's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi03g01190

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
Vitvi03g01190

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression