Description

Ensembl ID TraesWEE_scaffold_043890_01G000200 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 8049 bases Strand Minus strand
Position wee_scaffold_043890 : 65400 - 73448 RNA binding domain RNA_pol_Rpb1_4 , RNA_pol_Rpb1_1 , RNA_pol_Rpb1_5 , RNA_pol_Rpb1_2 , RNA_pol_Rpb1_3 , RNA_pol_Rpb1_6 , RNA_pol_Rpb1_7
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesWEE_scaffold_043890_01G000200 RNA_pol_Rpb1_4 PF05000 7e-40 1
TraesWEE_scaffold_043890_01G000200 RNA_pol_Rpb1_1 PF04997 1.1e-111 2
TraesWEE_scaffold_043890_01G000200 RNA_pol_Rpb1_5 PF04998 3.1e-105 3
TraesWEE_scaffold_043890_01G000200 RNA_pol_Rpb1_2 PF00623 5.3e-73 4
TraesWEE_scaffold_043890_01G000200 RNA_pol_Rpb1_3 PF04983 6e-48 5
TraesWEE_scaffold_043890_01G000200 RNA_pol_Rpb1_6 PF04992 7.7e-63 6
TraesWEE_scaffold_043890_01G000200 RNA_pol_Rpb1_7 PF04990 3.7e-50 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesWEE_scaffold_043890_01G000200.1 5544 1847aa TraesWEE_scaffold_043890_01G000200.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesWEE_scaffold_043890_01G000200

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesWEE_scaffold_043890_01G000200

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression