Description

Ensembl ID TraesTSP5A01G393600 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 5263 bases Strand Plus strand
Position 5A : 573384039 - 573389301 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesTSP5A01G393600 RNA_pol_Rpb2_1 PF04563 1.6e-73 1
TraesTSP5A01G393600 RNA_pol_Rpb2_3 PF04565 9.2e-26 2
TraesTSP5A01G393600 RNA_pol_Rpb2_2 PF04561 3.9e-57 3
TraesTSP5A01G393600 RNA_pol_Rpb2_4 PF04566 4.7e-21 4
TraesTSP5A01G393600 RNA_pol_Rpb2_5 PF04567 4.6e-12 5

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesTSP5A01G393600.1 2215 738aa TraesTSP5A01G393600.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesTSP5A01G393600

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesTSP5A01G393600

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression