Description

Ensembl ID TraesTSP4B01G360500 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 15010 bases Strand Minus strand
Position 4B : 626681056 - 626696065 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6 , RNA_pol_Rpb2_4 , RNA_pol_Rpb2_5
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesTSP4B01G360500 RNA_pol_Rpb2_1 PF04563 2.9e-37 1
TraesTSP4B01G360500 RNA_pol_Rpb2_3 PF04565 6e-19 2
TraesTSP4B01G360500 RNA_pol_Rpb2_7 PF04560 1.5e-30 3
TraesTSP4B01G360500 RNA_pol_Rpb2_2 PF04561 1.2e-16 4
TraesTSP4B01G360500 RNA_pol_Rpb2_6 PF00562 4e-111 5
TraesTSP4B01G360500 RNA_pol_Rpb2_4 PF04566 2.1e-19 6
TraesTSP4B01G360500 RNA_pol_Rpb2_5 PF04567 1.8e-09 7

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesTSP4B01G360500.1 3363 1120aa TraesTSP4B01G360500.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesTSP4B01G360500

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesTSP4B01G360500

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression