Description

Ensembl ID TraesSYM1D03G00482240 Gene ID Accession -
Symbol Alias - Full Name NA
Status Confidence Length 14695 bases Strand Plus strand
Position 1D : 220409105 - 220423799 RNA binding domain RNA_pol_Rpb2_1 , RNA_pol_Rpa2_4 , RNA_pol_Rpb2_3 , RNA_pol_Rpb2_7 , RNA_pol_Rpb2_2 , RNA_pol_Rpb2_6
Summary N.A.

RNA binding domains (RBDs)

Protein Domain Pfam ID E-value Domain number
TraesSYM1D03G00482240 RNA_pol_Rpb2_1 PF04563 1.1e-27 1
TraesSYM1D03G00482240 RNA_pol_Rpa2_4 PF06883 7.7e-18 2
TraesSYM1D03G00482240 RNA_pol_Rpa2_4 PF06883 9.3e-18 3
TraesSYM1D03G00482240 RNA_pol_Rpb2_3 PF04565 2.3e-27 4
TraesSYM1D03G00482240 RNA_pol_Rpb2_3 PF04565 2.9e-27 5
TraesSYM1D03G00482240 RNA_pol_Rpb2_7 PF04560 5.5e-22 6
TraesSYM1D03G00482240 RNA_pol_Rpb2_7 PF04560 7.8e-22 7
TraesSYM1D03G00482240 RNA_pol_Rpb2_2 PF04561 1.5e-10 8
TraesSYM1D03G00482240 RNA_pol_Rpb2_2 PF04561 1.8e-10 9
TraesSYM1D03G00482240 RNA_pol_Rpb2_6 PF00562 2.2e-106 10
TraesSYM1D03G00482240 RNA_pol_Rpb2_6 PF00562 3.3e-106 11

RNA binding proteomes (RBPomes)

Pubmed ID Full Name Cell Author Time Doi

Literatures on RNA binding capacity

Pubmed ID Title Author Time Journal

Transcripts

Name Transcript ID bp Protein Translation ID
- TraesSYM1D03G00482240.2 4095 1006aa TraesSYM1D03G00482240.2
- TraesSYM1D03G00482240.1 4090 1187aa TraesSYM1D03G00482240.1

Pathways

Pathway ID Pathway Name Source

Phenotypes

ensgID Trait pValue Pubmed ID

GWAS

ensgIDSNPChromosomePosition TraitPubmedIDOr or BEAT EFO ID

Paralogs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesSYM1D03G00482240

Orthologs

Ensembl ID Source Target
Species Protein ID Perc_pos Perc_id Species Protein ID Perc_pos Perc_id
TraesSYM1D03G00482240

Gene Ontology

Go ID Go term No. evidence Entries Species Category

Expression