RBPWorld - a comprehensive database of RNA Binding Proteins

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RBP World!

Description

Ensembl ID	TraesSTA5B03G02825300	Gene ID		Accession	-
Symbol		Alias	-	Full Name	NA
Status	Confidence	Length	4269 bases	Strand	Minus strand
Position	5B : 141914534 - 141918802	RNA binding domain	FDX-ACB , tRNA-synt_2d
Summary	N.A.

RNA binding domains (RBDs)

Protein	Domain	Pfam ID	E-value	Domain number
TraesSTA5B03G02825300	FDX-ACB	PF03147	4.4e-24	1
TraesSTA5B03G02825300	tRNA-synt_2d	PF01409	3.6e-49	2

RNA binding proteomes (RBPomes)

Pubmed ID	Full Name	Cell	Author	Time	Doi

Literatures on RNA binding capacity

Pubmed ID	Title	Author	Time	Journal

Transcripts

Name	Transcript ID	bp	Protein	Translation ID
-	TraesSTA5B03G02825300.1	1580	448aa	TraesSTA5B03G02825300.1

Gene Model

Click here to download TraesSTA5B03G02825300's gene model file

Pathways

Pathway ID	Pathway Name	Source

Phenotypes

ensgID	Trait	pValue	Pubmed ID

GWAS

ensgID	SNP	Chromosome	Position	Trait	PubmedID	Or or BEAT	EFO ID

Protein-Protein Interaction (PPI)

Click here to download TraesSTA5B03G02825300's PPI file

Paralogs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesSTA5B03G02825300

Orthologs

Ensembl ID	Source				Target
Ensembl ID	Species	Protein ID	Perc_pos	Perc_id	Species	Protein ID	Perc_pos	Perc_id
TraesSTA5B03G02825300

Gene Ontology

Go ID	Go term	No. evidence	Entries	Species	Category

Expression